Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 YOR316C-AYOR316C-A 210 nt-4.08□□□□□ -3.06
UFD4P33202 YJR157WYJR157W 363 nt-4.09□□□□□ -3.06
UFD4P33202 YAL066WYAL066W 309 nt-4.09□□□□□ -3.06
UFD4P33202 YMR001C-AYMR001C-A 231 nt-4.19□□□□□ -3.08
UFD4P33202 snR41snR41 95 nt-4.2□□□□□ -3.08
UFD4P33202 YGL041CYGL041C 204 nt-4.21□□□□□ -3.08
UFD4P33202 YLR434CYLR434C 384 nt-4.22□□□□□ -3.08
UFD4P33202 YAL016C-BYAL016C-B 186 nt-4.24□□□□□ -3.09
UFD4P33202 YLR299C-AYLR299C-A 93 nt-4.24□□□□□ -3.09
UFD4P33202 YOL013W-BYOL013W-B 291 nt-4.24□□□□□ -3.09
UFD4P33202 YLR120W-AYLR120W-A 102 nt-4.25□□□□□ -3.09
UFD4P33202 snR55snR55 98 nt-4.26□□□□□ -3.09
UFD4P33202 YHR180C-BYHR180C-B 105 nt-4.27□□□□□ -3.09
UFD4P33202 YPR197CYPR197C 564 nt-4.27□□□□□ -3.09
UFD4P33202 YOR329W-AYOR329W-A 210 nt-4.32□□□□□ -3.1
UFD4P33202 snR78snR78 87 nt-4.33□□□□□ -3.1
UFD4P33202 tW(UCA)QtW(UCA)Q 74 nt-4.36□□□□□ -3.11
UFD4P33202 YER181CYER181C 324 nt-4.37□□□□□ -3.11
UFD4P33202 HTL1YCR020W-B 237 nt-4.39□□□□□ -3.11
UFD4P33202 YPR012WYPR012W 255 nt-4.39□□□□□ -3.11
UFD4P33202 YEL014CYEL014C 306 nt-4.4□□□□□ -3.11
UFD4P33202 YKL106C-AYKL106C-A 120 nt-4.42□□□□□ -3.12
UFD4P33202 YOL038C-AYOL038C-A 96 nt-4.48□□□□□ -3.13
UFD4P33202 snR6snR6 112 nt-4.5□□□□□ -3.13
UFD4P33202 YOL155W-AYOL155W-A 135 nt-4.5□□□□□ -3.13
UFD4P33202 BIL1YOR304C-A 231 nt-4.51□□□□□ -3.13
UFD4P33202 YJL047C-AYJL047C-A 135 nt-4.53□□□□□ -3.13
UFD4P33202 YDR524C-AYDR524C-A 120 nt-4.56□□□□□ -3.14
UFD4P33202 STE18YJR086W 333 nt-4.58□□□□□ -3.14
UFD4P33202 YLR222C-AYLR222C-A 231 nt-4.58□□□□□ -3.14
UFD4P33202 YNL122CYNL122C 348 nt-4.59□□□□□ -3.14
UFD4P33202 YOR102WYOR102W 351 nt-4.65□□□□□ -3.15
UFD4P33202 snR73snR73 106 nt-4.69□□□□□ -3.16
UFD4P33202 Q0255Q0255 1419 nt-4.7□□□□□ -3.16
UFD4P33202 snR80snR80 171 nt-4.73□□□□□ -3.17
UFD4P33202 YJL150WYJL150W 303 nt-4.74□□□□□ -3.17
UFD4P33202 YKL123WYKL123W 381 nt-4.74□□□□□ -3.17
UFD4P33202 YDR413CYDR413C 576 nt-4.77□□□□□ -3.17
UFD4P33202 YOR335W-AYOR335W-A 81 nt-4.81□□□□□ -3.18
UFD4P33202 RPL41BYDL133C-A 78 nt-4.81□□□□□ -3.18
UFD4P33202 YNL198CYNL198C 303 nt-4.82□□□□□ -3.18
UFD4P33202 YGL188C-AYGL188C-A 141 nt-4.87□□□□□ -3.19
UFD4P33202 YBR131C-AYBR131C-A 90 nt-4.87□□□□□ -3.19
UFD4P33202 YBR109W-AYBR109W-A 225 nt-4.88□□□□□ -3.19
UFD4P33202 snR48snR48 113 nt-4.88□□□□□ -3.19
UFD4P33202 YAL063C-AYAL063C-A 291 nt-4.96□□□□□ -3.2
UFD4P33202 YKL118WYKL118W 312 nt-4.97□□□□□ -3.21
UFD4P33202 tF(GAA)QtF(GAA)Q 75 nt-4.99□□□□□ -3.21
UFD4P33202 YDR183C-AYDR183C-A 258 nt-5□□□□□ -3.21
UFD4P33202 YLR285C-AYLR285C-A 171 nt-5.02□□□□□ -3.21
UFD4P33202 YGR035CYGR035C 351 nt-5.04□□□□□ -3.22
UFD4P33202 tL(UAA)QtL(UAA)Q 85 nt-5.08□□□□□ -3.22
UFD4P33202 YBR296C-AYBR296C-A 120 nt-5.1□□□□□ -3.23
UFD4P33202 YPL038W-AYPL038W-A 192 nt-5.13□□□□□ -3.23
UFD4P33202 RPL41AYDL184C 78 nt-5.14□□□□□ -3.23
UFD4P33202 YNL097C-BYNL097C-B 123 nt-5.22□□□□□ -3.25
UFD4P33202 GIM4YEL003W 336 nt-5.25□□□□□ -3.25
UFD4P33202 snR56snR56 88 nt-5.26□□□□□ -3.25
UFD4P33202 snR87snR87 109 nt-5.36□□□□□ -3.27
UFD4P33202 snR38snR38 95 nt-5.36□□□□□ -3.27
UFD4P33202 YDR406W-AYDR406W-A 246 nt-5.39□□□□□ -3.27
UFD4P33202 YNR025CYNR025C 360 nt-5.46□□□□□ -3.28
UFD4P33202 YHL015W-AYHL015W-A 84 nt-5.47□□□□□ -3.29
UFD4P33202 snR85snR85 171 nt-5.62□□□□□ -3.31
UFD4P33202 RPL39YJL189W 156 nt-5.62□□□□□ -3.31
UFD4P33202 YNL277W-AYNL277W-A 189 nt-5.66□□□□□ -3.32
UFD4P33202 snR52snR52 92 nt-5.67□□□□□ -3.32
UFD4P33202 SOM1YEL059C-A 225 nt-5.74□□□□□ -3.33
UFD4P33202 tV(UAC)QtV(UAC)Q 76 nt-5.74□□□□□ -3.33
UFD4P33202 YOR302WYOR302W 78 nt-5.77□□□□□ -3.33
UFD4P33202 YDL114W-AYDL114W-A 114 nt-5.78□□□□□ -3.34
UFD4P33202 YOL164W-AYOL164W-A 183 nt-5.91□□□□□ -3.36
UFD4P33202 YCR095W-AYCR095W-A 159 nt-5.93□□□□□ -3.36
UFD4P33202 YJL136W-AYJL136W-A 84 nt-5.95□□□□□ -3.36
UFD4P33202 YBL071C-BYBL071C-B 99 nt-5.95□□□□□ -3.36
UFD4P33202 snR47snR47 99 nt-6.02□□□□□ -3.37
UFD4P33202 YGR151CYGR151C 336 nt-6.08□□□□□ -3.38
UFD4P33202 YDL240C-AYDL240C-A 138 nt-6.18□□□□□ -3.4
UFD4P33202 YDR157WYDR157W 402 nt-6.2□□□□□ -3.4
UFD4P33202 YDR118W-AYDR118W-A 117 nt-6.21□□□□□ -3.4
UFD4P33202 snR58snR58 96 nt-6.24□□□□□ -3.41
UFD4P33202 YBL100W-CYBL100W-C 120 nt-6.25□□□□□ -3.41
UFD4P33202 YKL225WYKL225W 348 nt-6.29□□□□□ -3.42
UFD4P33202 SPG3YDR504C 384 nt-6.31□□□□□ -3.42
UFD4P33202 YKL096C-BYKL096C-B 150 nt-6.32□□□□□ -3.42
UFD4P33202 YBL053WYBL053W 375 nt-6.34□□□□□ -3.42
UFD4P33202 tR(UCU)Q1tR(UCU)Q1 73 nt-6.35□□□□□ -3.43
UFD4P33202 YAL037C-AYAL037C-A 93 nt-6.35□□□□□ -3.43
UFD4P33202 YPL152W-AYPL152W-A 99 nt-6.41□□□□□ -3.44
UFD4P33202 YEL050W-AYEL050W-A 192 nt-6.46□□□□□ -3.44
UFD4P33202 YHR175W-AYHR175W-A 150 nt-6.48□□□□□ -3.45
UFD4P33202 tS(GCU)Q1tS(GCU)Q1 86 nt-6.6□□□□□ -3.47
UFD4P33202 snR65snR65 100 nt-6.72□□□□□ -3.48
UFD4P33202 YGR122C-AYGR122C-A 129 nt-6.78□□□□□ -3.49
UFD4P33202 YDL159W-AYDL159W-A 132 nt-6.82□□□□□ -3.5
UFD4P33202 YDR034C-AYDR034C-A 177 nt-6.84□□□□□ -3.5
UFD4P33202 YNL170WYNL170W 396 nt-6.84□□□□□ -3.5
UFD4P33202 YCL001W-BYCL001W-B 255 nt-7.16□□□□□ -3.56
UFD4P33202 YGL007C-AYGL007C-A 87 nt-7.24□□□□□ -3.57
UFD4P33202 Q0017Q0017 162 nt-7.24□□□□□ -3.57
Retrieved 100 of 7,029 protein–RNA pairs in 51.3 ms