Protein–RNA interactions for Protein: P32657

CHD1, Chromo domain-containing protein 1, yeastyeast

Predictions only

Length 1,468 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHD1P32657 snR39BsnR39B 96 nt-2.45□□□□□ -2.8
CHD1P32657 snR67snR67 82 nt-2.46□□□□□ -2.8
CHD1P32657 YGR240C-AYGR240C-A 201 nt-2.46□□□□□ -2.8
CHD1P32657 YDR183C-AYDR183C-A 258 nt-2.47□□□□□ -2.81
CHD1P32657 YGL041CYGL041C 204 nt-2.51□□□□□ -2.81
CHD1P32657 YOR381W-AYOR381W-A 168 nt-2.54□□□□□ -2.82
CHD1P32657 YMR315W-AYMR315W-A 108 nt-2.56□□□□□ -2.82
CHD1P32657 YOR293C-AYOR293C-A 150 nt-2.58□□□□□ -2.82
CHD1P32657 YML054C-AYML054C-A 159 nt-2.59□□□□□ -2.82
CHD1P32657 YBR182C-AYBR182C-A 195 nt-2.61□□□□□ -2.83
CHD1P32657 tD(GUC)QtD(GUC)Q 75 nt-2.62□□□□□ -2.83
CHD1P32657 YOR008C-AYOR008C-A 225 nt-2.62□□□□□ -2.83
CHD1P32657 YLR286W-AYLR286W-A 135 nt-2.69□□□□□ -2.84
CHD1P32657 YFL019CYFL019C 354 nt-2.76□□□□□ -2.85
CHD1P32657 YOR309CYOR309C 381 nt-2.77□□□□□ -2.85
CHD1P32657 YPL038W-AYPL038W-A 192 nt-2.77□□□□□ -2.85
CHD1P32657 YEL014CYEL014C 306 nt-2.78□□□□□ -2.86
CHD1P32657 YPR197CYPR197C 564 nt-2.8□□□□□ -2.86
CHD1P32657 YDL159C-BYDL159C-B 177 nt-2.81□□□□□ -2.86
CHD1P32657 YJR162CYJR162C 351 nt-2.81□□□□□ -2.86
CHD1P32657 YNL337WYNL337W 255 nt-2.81□□□□□ -2.86
CHD1P32657 YAL016C-BYAL016C-B 186 nt-2.82□□□□□ -2.86
CHD1P32657 YER181CYER181C 324 nt-2.83□□□□□ -2.86
CHD1P32657 YDR413CYDR413C 576 nt-2.87□□□□□ -2.87
CHD1P32657 YOR329W-AYOR329W-A 210 nt-2.87□□□□□ -2.87
CHD1P32657 RPL39YJL189W 156 nt-2.88□□□□□ -2.87
CHD1P32657 tF(GAA)QtF(GAA)Q 75 nt-2.89□□□□□ -2.87
CHD1P32657 YJR157WYJR157W 363 nt-2.89□□□□□ -2.87
CHD1P32657 YBR178WYBR178W 375 nt-2.92□□□□□ -2.88
CHD1P32657 YBR131C-AYBR131C-A 90 nt-2.99□□□□□ -2.89
CHD1P32657 YOL083C-AYOL083C-A 141 nt-3.02□□□□□ -2.89
CHD1P32657 YDR157WYDR157W 402 nt-3.05□□□□□ -2.9
CHD1P32657 snR55snR55 98 nt-3.08□□□□□ -2.9
CHD1P32657 YOR102WYOR102W 351 nt-3.1□□□□□ -2.91
CHD1P32657 YDR524W-CYDR524W-C 90 nt-3.12□□□□□ -2.91
CHD1P32657 YLR342W-AYLR342W-A 174 nt-3.15□□□□□ -2.91
CHD1P32657 YOR376W-AYOR376W-A 156 nt-3.15□□□□□ -2.91
CHD1P32657 YBR196C-AYBR196C-A 150 nt-3.15□□□□□ -2.91
CHD1P32657 Q0017Q0017 162 nt-3.15□□□□□ -2.91
CHD1P32657 YLR299C-AYLR299C-A 93 nt-3.16□□□□□ -2.91
CHD1P32657 YDL240C-AYDL240C-A 138 nt-3.18□□□□□ -2.92
CHD1P32657 YKL118WYKL118W 312 nt-3.18□□□□□ -2.92
CHD1P32657 snR48snR48 113 nt-3.2□□□□□ -2.92
CHD1P32657 YNL277W-AYNL277W-A 189 nt-3.22□□□□□ -2.93
CHD1P32657 YGL188C-AYGL188C-A 141 nt-3.29□□□□□ -2.94
CHD1P32657 YLR222C-AYLR222C-A 231 nt-3.29□□□□□ -2.94
CHD1P32657 YNL097C-BYNL097C-B 123 nt-3.29□□□□□ -2.94
CHD1P32657 YDR524C-AYDR524C-A 120 nt-3.35□□□□□ -2.95
CHD1P32657 GIM4YEL003W 336 nt-3.36□□□□□ -2.95
CHD1P32657 YOR316C-AYOR316C-A 210 nt-3.39□□□□□ -2.95
CHD1P32657 YOL155W-AYOL155W-A 135 nt-3.42□□□□□ -2.96
CHD1P32657 YHR180C-BYHR180C-B 105 nt-3.45□□□□□ -2.96
CHD1P32657 tL(UAA)QtL(UAA)Q 85 nt-3.51□□□□□ -2.97
CHD1P32657 YDR118W-AYDR118W-A 117 nt-3.53□□□□□ -2.97
CHD1P32657 snR6snR6 112 nt-3.56□□□□□ -2.98
CHD1P32657 YPR012WYPR012W 255 nt-3.6□□□□□ -2.99
CHD1P32657 YOR302WYOR302W 78 nt-3.61□□□□□ -2.99
CHD1P32657 YHL015W-AYHL015W-A 84 nt-3.64□□□□□ -2.99
CHD1P32657 snR52snR52 92 nt-3.64□□□□□ -2.99
CHD1P32657 YKL106C-AYKL106C-A 120 nt-3.72□□□□□ -3
CHD1P32657 VAR1Q0140 1197 nt-3.77□□□□□ -3.01
CHD1P32657 YNL198CYNL198C 303 nt-3.78□□□□□ -3.01
CHD1P32657 snR73snR73 106 nt-3.79□□□□□ -3.02
CHD1P32657 snR65snR65 100 nt-3.82□□□□□ -3.02
CHD1P32657 YPL152W-AYPL152W-A 99 nt-3.83□□□□□ -3.02
CHD1P32657 YJL150WYJL150W 303 nt-3.84□□□□□ -3.02
CHD1P32657 snR80snR80 171 nt-3.86□□□□□ -3.03
CHD1P32657 snR56snR56 88 nt-3.9□□□□□ -3.03
CHD1P32657 YOR335W-AYOR335W-A 81 nt-3.9□□□□□ -3.03
CHD1P32657 RPL41BYDL133C-A 78 nt-4.01□□□□□ -3.05
CHD1P32657 SOM1YEL059C-A 225 nt-4.05□□□□□ -3.06
CHD1P32657 YBR296C-AYBR296C-A 120 nt-4.06□□□□□ -3.06
CHD1P32657 RPL41AYDL184C 78 nt-4.07□□□□□ -3.06
CHD1P32657 YBR109W-AYBR109W-A 225 nt-4.08□□□□□ -3.06
CHD1P32657 YCR095W-AYCR095W-A 159 nt-4.11□□□□□ -3.07
CHD1P32657 YDR406W-AYDR406W-A 246 nt-4.31□□□□□ -3.1
CHD1P32657 snR87snR87 109 nt-4.35□□□□□ -3.11
CHD1P32657 snR38snR38 95 nt-4.41□□□□□ -3.12
CHD1P32657 YOR231C-AYOR231C-A 201 nt-4.54□□□□□ -3.14
CHD1P32657 YGR151CYGR151C 336 nt-4.55□□□□□ -3.14
CHD1P32657 YOL164W-AYOL164W-A 183 nt-4.6□□□□□ -3.15
CHD1P32657 YHR175W-AYHR175W-A 150 nt-4.61□□□□□ -3.15
CHD1P32657 YBL071C-BYBL071C-B 99 nt-4.63□□□□□ -3.15
CHD1P32657 snR85snR85 171 nt-4.66□□□□□ -3.16
CHD1P32657 YBL053WYBL053W 375 nt-4.67□□□□□ -3.16
CHD1P32657 tV(UAC)QtV(UAC)Q 76 nt-4.68□□□□□ -3.16
CHD1P32657 YBL100W-CYBL100W-C 120 nt-4.77□□□□□ -3.17
CHD1P32657 snR47snR47 99 nt-4.78□□□□□ -3.17
CHD1P32657 YAL037C-AYAL037C-A 93 nt-4.81□□□□□ -3.18
CHD1P32657 YDL114W-AYDL114W-A 114 nt-4.83□□□□□ -3.18
CHD1P32657 tR(ACG)Q2tR(ACG)Q2 74 nt-4.88□□□□□ -3.19
CHD1P32657 Q0144Q0144 330 nt-4.94□□□□□ -3.2
CHD1P32657 YMR046W-AYMR046W-A 129 nt-5.01□□□□□ -3.21
CHD1P32657 snR58snR58 96 nt-5.08□□□□□ -3.22
CHD1P32657 YJL136W-AYJL136W-A 84 nt-5.14□□□□□ -3.23
CHD1P32657 YKL225WYKL225W 348 nt-5.14□□□□□ -3.23
CHD1P32657 YKL096C-BYKL096C-B 150 nt-5.16□□□□□ -3.24
CHD1P32657 YCL001W-BYCL001W-B 255 nt-5.23□□□□□ -3.25
CHD1P32657 SPG3YDR504C 384 nt-5.26□□□□□ -3.25
CHD1P32657 tS(GCU)Q1tS(GCU)Q1 86 nt-5.39□□□□□ -3.27
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms