Protein–RNA interactions for Protein: P22007

RAM1, Protein farnesyltransferase subunit beta, yeastyeast

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAM1P22007 TRM732YMR259C 4263 nt1.9□□□□□ -2.11
RAM1P22007 NEO1YIL048W 3456 nt1.9□□□□□ -2.11
RAM1P22007 YER090C-AYER090C-A 90 nt1.88□□□□□ -2.11
RAM1P22007 TMA7YLR262C-A 195 nt1.88□□□□□ -2.11
RAM1P22007 SSK2YNR031C 4740 nt1.88□□□□□ -2.11
RAM1P22007 DNF3YMR162C 4971 nt1.88□□□□□ -2.11
RAM1P22007 NUP188YML103C 4968 nt1.84□□□□□ -2.12
RAM1P22007 PEP1YBL017C 4740 nt1.82□□□□□ -2.12
RAM1P22007 snR40snR40 97 nt1.81□□□□□ -2.12
RAM1P22007 BST1YFL025C 3090 nt1.81□□□□□ -2.12
RAM1P22007 CLU1YMR012W 3834 nt1.81□□□□□ -2.12
RAM1P22007 YNL284C-BYNL284C-B 5268 nt1.79□□□□□ -2.12
RAM1P22007 snR67snR67 82 nt1.79□□□□□ -2.12
RAM1P22007 YKL106C-AYKL106C-A 120 nt1.77□□□□□ -2.13
RAM1P22007 CDC39YCR093W 6327 nt1.76□□□□□ -2.13
RAM1P22007 PAU24YBR301W 363 nt1.75□□□□□ -2.13
RAM1P22007 tT(UGU)HtT(UGU)H 72 nt1.73□□□□□ -2.13
RAM1P22007 tV(UAC)QtV(UAC)Q 76 nt1.73□□□□□ -2.13
RAM1P22007 CFT1YDR301W 4074 nt1.72□□□□□ -2.13
RAM1P22007 LAA1YJL207C 6045 nt1.7□□□□□ -2.14
RAM1P22007 VPS15YBR097W 4365 nt1.7□□□□□ -2.14
RAM1P22007 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
RAM1P22007 MLP2YIL149C 5040 nt1.67□□□□□ -2.14
RAM1P22007 YMR160WYMR160W 2451 nt1.66□□□□□ -2.14
RAM1P22007 BRR2YER172C 6492 nt1.66□□□□□ -2.14
RAM1P22007 YGR130CYGR130C 2451 nt1.65□□□□□ -2.15
RAM1P22007 CCH1YGR217W 6120 nt1.64□□□□□ -2.15
RAM1P22007 IRA1YBR140C 9279 nt1.62□□□□□ -2.15
RAM1P22007 SPT7YBR081C 3999 nt1.59□□□□□ -2.16
RAM1P22007 SPC110YDR356W 2835 nt1.58□□□□□ -2.16
RAM1P22007 MEC1YBR136W 7107 nt1.54□□□□□ -2.16
RAM1P22007 YNL054W-BYNL054W-B 5250 nt1.53□□□□□ -2.17
RAM1P22007 VAM6YDL077C 3150 nt1.51□□□□□ -2.17
RAM1P22007 DOP1YDR141C 5097 nt1.48□□□□□ -2.17
RAM1P22007 LTE1YAL024C 4308 nt1.48□□□□□ -2.17
RAM1P22007 YOR192C-BYOR192C-B 5313 nt1.47□□□□□ -2.17
RAM1P22007 IML1YJR138W 4755 nt1.44□□□□□ -2.18
RAM1P22007 tH(GUG)E1tH(GUG)E1 72 nt1.43□□□□□ -2.18
RAM1P22007 tH(GUG)E2tH(GUG)E2 72 nt1.43□□□□□ -2.18
RAM1P22007 tH(GUG)G1tH(GUG)G1 72 nt1.43□□□□□ -2.18
RAM1P22007 tH(GUG)G2tH(GUG)G2 72 nt1.43□□□□□ -2.18
RAM1P22007 tH(GUG)HtH(GUG)H 72 nt1.43□□□□□ -2.18
RAM1P22007 tH(GUG)KtH(GUG)K 72 nt1.43□□□□□ -2.18
RAM1P22007 tH(GUG)MtH(GUG)M 72 nt1.43□□□□□ -2.18
RAM1P22007 tF(GAA)BtF(GAA)B 73 nt1.38□□□□□ -2.19
RAM1P22007 tF(GAA)FtF(GAA)F 73 nt1.38□□□□□ -2.19
RAM1P22007 tF(GAA)GtF(GAA)G 73 nt1.38□□□□□ -2.19
RAM1P22007 tF(GAA)H1tF(GAA)H1 73 nt1.38□□□□□ -2.19
RAM1P22007 tF(GAA)H2tF(GAA)H2 73 nt1.38□□□□□ -2.19
RAM1P22007 tF(GAA)MtF(GAA)M 73 nt1.38□□□□□ -2.19
RAM1P22007 tF(GAA)P1tF(GAA)P1 73 nt1.38□□□□□ -2.19
RAM1P22007 tF(GAA)P2tF(GAA)P2 73 nt1.38□□□□□ -2.19
RAM1P22007 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
RAM1P22007 snR77snR77 88 nt1.37□□□□□ -2.19
RAM1P22007 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
RAM1P22007 MYO1YHR023W 5787 nt1.36□□□□□ -2.19
RAM1P22007 YPR117WYPR117W 7470 nt1.35□□□□□ -2.19
RAM1P22007 tV(UAC)BtV(UAC)B 74 nt1.33□□□□□ -2.2
RAM1P22007 tV(UAC)DtV(UAC)D 74 nt1.33□□□□□ -2.2
RAM1P22007 RKR1YMR247C 4689 nt1.33□□□□□ -2.2
RAM1P22007 UTP20YBL004W 7482 nt1.32□□□□□ -2.2
RAM1P22007 BUD3YCL014W 4911 nt1.32□□□□□ -2.2
RAM1P22007 YOR316C-AYOR316C-A 210 nt1.31□□□□□ -2.2
RAM1P22007 SCC2YDR180W 4482 nt1.26□□□□□ -2.21
RAM1P22007 SBH2YER019C-A 267 nt1.25□□□□□ -2.21
RAM1P22007 YOL014WYOL014W 375 nt1.2□□□□□ -2.22
RAM1P22007 YBL100W-BYBL100W-B 5313 nt1.18□□□□□ -2.22
RAM1P22007 YML100W-AYML100W-A 174 nt1.09□□□□□ -2.23
RAM1P22007 MLP1YKR095W 5628 nt1.07□□□□□ -2.24
RAM1P22007 YJR029WYJR029W 5268 nt1.06□□□□□ -2.24
RAM1P22007 YPR137C-BYPR137C-B 5268 nt1.06□□□□□ -2.24
RAM1P22007 YOR186C-AYOR186C-A 210 nt1.04□□□□□ -2.24
RAM1P22007 BEM2YER155C 6504 nt1.03□□□□□ -2.24
RAM1P22007 SOV1YMR066W 2697 nt1.01□□□□□ -2.25
RAM1P22007 THO2YNL139C 4794 nt1□□□□□ -2.25
RAM1P22007 YKL145W-AYKL145W-A 93 nt0.99□□□□□ -2.25
RAM1P22007 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
RAM1P22007 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
RAM1P22007 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
RAM1P22007 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
RAM1P22007 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
RAM1P22007 IQG1YPL242C 4488 nt0.94□□□□□ -2.26
RAM1P22007 PAU9YBL108C-A 129 nt0.91□□□□□ -2.26
RAM1P22007 ESP1YGR098C 4893 nt0.82□□□□□ -2.28
RAM1P22007 tC(GCA)QtC(GCA)Q 76 nt0.76□□□□□ -2.29
RAM1P22007 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
RAM1P22007 RPL41BYDL133C-A 78 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
RAM1P22007 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
RAM1P22007 snR128snR128 126 nt0.71□□□□□ -2.3
RAM1P22007 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 48.3 ms