Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.21■□□□□ 0.99
LINC00271P0C7V0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00271P0C7V0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
LINC00271P0C7V0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00271P0C7V0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 TFP1-202ENST00000475455 1573 ntBASIC21.19■□□□□ 0.98
LINC00271P0C7V0 AC116351.2-201ENST00000606540 1585 ntBASIC21.19■□□□□ 0.98
LINC00271P0C7V0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 MYC-208ENST00000641036 567 ntBASIC21.19■□□□□ 0.98
LINC00271P0C7V0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00271P0C7V0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 AC063952.2-201ENST00000498792 1227 ntBASIC21.18■□□□□ 0.98
LINC00271P0C7V0 KRT18P16-201ENST00000510337 1294 ntBASIC21.18■□□□□ 0.98
LINC00271P0C7V0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
LINC00271P0C7V0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 AC005229.4-201ENST00000610085 2198 ntBASIC21.17■□□□□ 0.98
LINC00271P0C7V0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 AC097488.1-201ENST00000507834 756 ntBASIC21.17■□□□□ 0.98
LINC00271P0C7V0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00271P0C7V0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 PLK5-205ENST00000642079 1969 ntBASIC21.16■□□□□ 0.98
LINC00271P0C7V0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00271P0C7V0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms