Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NANOGP1Q8N7R0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NANOGP1Q8N7R0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 WASH5P-204ENST00000632292 975 ntBASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 AC010864.1-201ENST00000609407 1511 ntBASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.14■■□□□ 1.3
NANOGP1Q8N7R0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.14■■□□□ 1.3
NANOGP1Q8N7R0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NANOGP1Q8N7R0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.14■■□□□ 1.29
NANOGP1Q8N7R0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NANOGP1Q8N7R0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NANOGP1Q8N7R0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.12■■□□□ 1.29
NANOGP1Q8N7R0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NANOGP1Q8N7R0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NANOGP1Q8N7R0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
NANOGP1Q8N7R0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
NANOGP1Q8N7R0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.1■■□□□ 1.29
NANOGP1Q8N7R0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NANOGP1Q8N7R0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NANOGP1Q8N7R0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NANOGP1Q8N7R0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NANOGP1Q8N7R0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NANOGP1Q8N7R0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NANOGP1Q8N7R0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
NANOGP1Q8N7R0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NANOGP1Q8N7R0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NANOGP1Q8N7R0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NANOGP1Q8N7R0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NANOGP1Q8N7R0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.03■■□□□ 1.28
NANOGP1Q8N7R0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 AP004833.2-201ENST00000532228 1454 ntBASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23■■□□□ 1.27
NANOGP1Q8N7R0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23■■□□□ 1.27
NANOGP1Q8N7R0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 LINC01003-201ENST00000564834 1764 ntBASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
NANOGP1Q8N7R0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.95■■□□□ 1.26
NANOGP1Q8N7R0 AL449106.1-201ENST00000608517 1980 ntBASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
NANOGP1Q8N7R0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.93■■□□□ 1.26
NANOGP1Q8N7R0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms