Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 MAE1YKL029C 2010 nt8.7□□□□□ -1.02
DDC1Q08949 HTS1YPR033C 1641 nt8.69□□□□□ -1.02
DDC1Q08949 SNX3YOR357C 489 nt8.69□□□□□ -1.02
DDC1Q08949 ENO1YGR254W 1314 nt8.69□□□□□ -1.02
DDC1Q08949 RPD3YNL330C 1302 nt8.69□□□□□ -1.02
DDC1Q08949 SRP54YPR088C 1626 nt8.68□□□□□ -1.02
DDC1Q08949 SAN1YDR143C 1833 nt8.68□□□□□ -1.02
DDC1Q08949 GAL2YLR081W 1725 nt8.67□□□□□ -1.02
DDC1Q08949 HIS2YFR025C 1008 nt8.66□□□□□ -1.02
DDC1Q08949 ERO1YML130C 1692 nt8.65□□□□□ -1.02
DDC1Q08949 GTB1YDR221W 2109 nt8.65□□□□□ -1.02
DDC1Q08949 YMR007WYMR007W 381 nt8.65□□□□□ -1.02
DDC1Q08949 SSL2YIL143C 2532 nt8.65□□□□□ -1.02
DDC1Q08949 URA8YJR103W 1737 nt8.65□□□□□ -1.03
DDC1Q08949 CWP2YKL096W-A 279 nt8.64□□□□□ -1.03
DDC1Q08949 YLR280CYLR280C 351 nt8.64□□□□□ -1.03
DDC1Q08949 RIM2YBR192W 1134 nt8.64□□□□□ -1.03
DDC1Q08949 KGD2YDR148C 1392 nt8.62□□□□□ -1.03
DDC1Q08949 POP2YNR052C 1302 nt8.62□□□□□ -1.03
DDC1Q08949 TGA1tA(UGC)A 73 nt8.62□□□□□ -1.03
DDC1Q08949 tA(UGC)EtA(UGC)E 73 nt8.62□□□□□ -1.03
DDC1Q08949 tA(UGC)GtA(UGC)G 73 nt8.62□□□□□ -1.03
DDC1Q08949 tA(UGC)LtA(UGC)L 73 nt8.62□□□□□ -1.03
DDC1Q08949 tA(UGC)OtA(UGC)O 73 nt8.62□□□□□ -1.03
DDC1Q08949 YGR210CYGR210C 1236 nt8.62□□□□□ -1.03
DDC1Q08949 YPT11YNL304W 1254 nt8.62□□□□□ -1.03
DDC1Q08949 RFC1YOR217W 2586 nt8.61□□□□□ -1.03
DDC1Q08949 YER152W-AYER152W-A 567 nt8.6□□□□□ -1.03
DDC1Q08949 RIM8YGL045W 1629 nt8.59□□□□□ -1.03
DDC1Q08949 KRR1YCL059C 951 nt8.59□□□□□ -1.03
DDC1Q08949 YFR020WYFR020W 699 nt8.59□□□□□ -1.03
DDC1Q08949 HEM14YER014W 1620 nt8.58□□□□□ -1.04
DDC1Q08949 RPC31YNL151C 756 nt8.58□□□□□ -1.04
DDC1Q08949 RCR1YBR005W 642 nt8.58□□□□□ -1.04
DDC1Q08949 ODC1YPL134C 933 nt8.57□□□□□ -1.04
DDC1Q08949 SBP1YHL034C 885 nt8.56□□□□□ -1.04
DDC1Q08949 YPL108WYPL108W 507 nt8.56□□□□□ -1.04
DDC1Q08949 FCY1YPR062W 477 nt8.55□□□□□ -1.04
DDC1Q08949 GAS1YMR307W 1680 nt8.55□□□□□ -1.04
DDC1Q08949 DPL1YDR294C 1770 nt8.55□□□□□ -1.04
DDC1Q08949 PTC6YCR079W 1329 nt8.54□□□□□ -1.04
DDC1Q08949 TOK1YJL093C 2076 nt8.52□□□□□ -1.05
DDC1Q08949 YJL160CYJL160C 864 nt8.51□□□□□ -1.05
DDC1Q08949 RSM7YJR113C 744 nt8.51□□□□□ -1.05
DDC1Q08949 YGL114WYGL114W 2178 nt8.51□□□□□ -1.05
DDC1Q08949 MDM35YKL053C-A 261 nt8.48□□□□□ -1.05
DDC1Q08949 YMR166CYMR166C 1107 nt8.48□□□□□ -1.05
DDC1Q08949 YMR316C-BYMR316C-B 309 nt8.48□□□□□ -1.05
DDC1Q08949 BUD20YLR074C 501 nt8.47□□□□□ -1.05
DDC1Q08949 THI3YDL080C 1830 nt8.46□□□□□ -1.06
DDC1Q08949 GGA2YHR108W 1758 nt8.45□□□□□ -1.06
DDC1Q08949 PAU21YOR394W 495 nt8.45□□□□□ -1.06
DDC1Q08949 PAU22YPL282C 495 nt8.45□□□□□ -1.06
DDC1Q08949 EMC3YKL207W 762 nt8.44□□□□□ -1.06
DDC1Q08949 LSP1YPL004C 1026 nt8.44□□□□□ -1.06
DDC1Q08949 YMR210WYMR210W 1350 nt8.43□□□□□ -1.06
DDC1Q08949 PET18YCR020C 648 nt8.42□□□□□ -1.06
DDC1Q08949 GRH1YDR517W 1119 nt8.42□□□□□ -1.06
DDC1Q08949 GPM1YKL152C 744 nt8.41□□□□□ -1.06
DDC1Q08949 YOR343CYOR343C 327 nt8.41□□□□□ -1.06
DDC1Q08949 LEU4YNL104C 1860 nt8.4□□□□□ -1.06
DDC1Q08949 YLR460CYLR460C 1131 nt8.4□□□□□ -1.06
DDC1Q08949 OCH1YGL038C 1443 nt8.39□□□□□ -1.07
DDC1Q08949 YDR467CYDR467C 327 nt8.39□□□□□ -1.07
DDC1Q08949 CAK1YFL029C 1107 nt8.39□□□□□ -1.07
DDC1Q08949 RRT14YIL127C 621 nt8.38□□□□□ -1.07
DDC1Q08949 MET22YOL064C 1074 nt8.38□□□□□ -1.07
DDC1Q08949 YMR209CYMR209C 1374 nt8.37□□□□□ -1.07
DDC1Q08949 DMA2YNL116W 1569 nt8.37□□□□□ -1.07
DDC1Q08949 tE(CUC)DtE(CUC)D 72 nt8.37□□□□□ -1.07
DDC1Q08949 tE(CUC)ItE(CUC)I 72 nt8.37□□□□□ -1.07
DDC1Q08949 CHS7YHR142W 951 nt8.37□□□□□ -1.07
DDC1Q08949 HRA1HRA1 564 nt8.37□□□□□ -1.07
DDC1Q08949 YER156CYER156C 1017 nt8.36□□□□□ -1.07
DDC1Q08949 YRF1-2YER190W 5046 nt8.36□□□□□ -1.07
DDC1Q08949 RSC4YKR008W 1878 nt8.35□□□□□ -1.07
DDC1Q08949 PDC6YGR087C 1692 nt8.35□□□□□ -1.07
DDC1Q08949 RNA170RNA170 169 nt8.35□□□□□ -1.07
DDC1Q08949 AAC3YBR085W 924 nt8.35□□□□□ -1.07
DDC1Q08949 MRP1YDR347W 966 nt8.34□□□□□ -1.07
DDC1Q08949 TMS1YDR105C 1422 nt8.34□□□□□ -1.07
DDC1Q08949 ADA2YDR448W 1305 nt8.33□□□□□ -1.08
DDC1Q08949 UTR5YEL035C 501 nt8.33□□□□□ -1.08
DDC1Q08949 YIR035CYIR035C 765 nt8.33□□□□□ -1.08
DDC1Q08949 YBL095WYBL095W 813 nt8.33□□□□□ -1.08
DDC1Q08949 RPL12BYDR418W 498 nt8.32□□□□□ -1.08
DDC1Q08949 HXT10YFL011W 1641 nt8.32□□□□□ -1.08
DDC1Q08949 INH1YDL181W 258 nt8.31□□□□□ -1.08
DDC1Q08949 YAL016C-AYAL016C-A 315 nt8.31□□□□□ -1.08
DDC1Q08949 MFT1YML062C 1179 nt8.31□□□□□ -1.08
DDC1Q08949 OLA1YBR025C 1185 nt8.3□□□□□ -1.08
DDC1Q08949 GDH1YOR375C 1365 nt8.3□□□□□ -1.08
DDC1Q08949 BXI1YNL305C 894 nt8.29□□□□□ -1.08
DDC1Q08949 YHR218WYHR218W 1812 nt8.29□□□□□ -1.08
DDC1Q08949 AGP3YFL055W 1677 nt8.28□□□□□ -1.08
DDC1Q08949 RPS6AYPL090C 711 nt8.28□□□□□ -1.08
DDC1Q08949 RPS6BYBR181C 711 nt8.28□□□□□ -1.08
DDC1Q08949 YJR149WYJR149W 1215 nt8.27□□□□□ -1.09
DDC1Q08949 FRA1YLL029W 2250 nt8.27□□□□□ -1.09
DDC1Q08949 NPP2YEL016C 1482 nt8.26□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 96.9 ms