Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YMR074CYMR074C 438 nt8.97□□□□□ -0.97
VPS13Q07878 HEM13YDR044W 987 nt8.95□□□□□ -0.98
VPS13Q07878 YMR166CYMR166C 1107 nt8.95□□□□□ -0.98
VPS13Q07878 YNR064CYNR064C 873 nt8.94□□□□□ -0.98
VPS13Q07878 PET8YNL003C 855 nt8.94□□□□□ -0.98
VPS13Q07878 YIL168WYIL168W 384 nt8.93□□□□□ -0.98
VPS13Q07878 MFT1YML062C 1179 nt8.93□□□□□ -0.98
VPS13Q07878 ACH1YBL015W 1581 nt8.92□□□□□ -0.98
VPS13Q07878 OPI3YJR073C 621 nt8.91□□□□□ -0.98
VPS13Q07878 BXI1YNL305C 894 nt8.91□□□□□ -0.98
VPS13Q07878 YAL019W-AYAL019W-A 570 nt8.91□□□□□ -0.98
VPS13Q07878 LSB6YJL100W 1824 nt8.89□□□□□ -0.99
VPS13Q07878 YML079WYML079W 606 nt8.89□□□□□ -0.99
VPS13Q07878 AMF1YOR378W 1548 nt8.89□□□□□ -0.99
VPS13Q07878 PSP2YML017W 1782 nt8.87□□□□□ -0.99
VPS13Q07878 LEU2YCL018W 1095 nt8.87□□□□□ -0.99
VPS13Q07878 DPS1YLL018C 1674 nt8.86□□□□□ -0.99
VPS13Q07878 NUP53YMR153W 1428 nt8.86□□□□□ -0.99
VPS13Q07878 RPS6AYPL090C 711 nt8.85□□□□□ -0.99
VPS13Q07878 RPS6BYBR181C 711 nt8.85□□□□□ -0.99
VPS13Q07878 YDR476CYDR476C 675 nt8.85□□□□□ -0.99
VPS13Q07878 PUP2YGR253C 783 nt8.85□□□□□ -0.99
VPS13Q07878 YER156CYER156C 1017 nt8.84□□□□□ -0.99
VPS13Q07878 YPR084WYPR084W 1371 nt8.83□□□□□ -1
VPS13Q07878 TDH1YJL052W 999 nt8.83□□□□□ -1
VPS13Q07878 SLM3YDL033C 1254 nt8.83□□□□□ -1
VPS13Q07878 RRT8YOL048C 1029 nt8.82□□□□□ -1
VPS13Q07878 SPP2YOR148C 558 nt8.81□□□□□ -1
VPS13Q07878 PUS4YNL292W 1212 nt8.81□□□□□ -1
VPS13Q07878 YLR184WYLR184W 348 nt8.79□□□□□ -1
VPS13Q07878 CCT2YIL142W 1584 nt8.77□□□□□ -1.01
VPS13Q07878 NCA3YJL116C 1014 nt8.76□□□□□ -1.01
VPS13Q07878 YOX1YML027W 1158 nt8.76□□□□□ -1.01
VPS13Q07878 PIH1YHR034C 1035 nt8.75□□□□□ -1.01
VPS13Q07878 CYS3YAL012W 1185 nt8.74□□□□□ -1.01
VPS13Q07878 UME1YPL139C 1383 nt8.74□□□□□ -1.01
VPS13Q07878 ESBP6YNL125C 2022 nt8.73□□□□□ -1.01
VPS13Q07878 RRT14YIL127C 621 nt8.72□□□□□ -1.01
VPS13Q07878 YFR020WYFR020W 699 nt8.72□□□□□ -1.01
VPS13Q07878 YOR200WYOR200W 399 nt8.72□□□□□ -1.01
VPS13Q07878 MET22YOL064C 1074 nt8.71□□□□□ -1.01
VPS13Q07878 MPH3YJR160C 1809 nt8.71□□□□□ -1.02
VPS13Q07878 SRP54YPR088C 1626 nt8.7□□□□□ -1.02
VPS13Q07878 HAC1YFL031W 717 nt8.7□□□□□ -1.02
VPS13Q07878 SPE3YPR069C 882 nt8.7□□□□□ -1.02
VPS13Q07878 LAT1YNL071W 1449 nt8.7□□□□□ -1.02
VPS13Q07878 CAK1YFL029C 1107 nt8.69□□□□□ -1.02
VPS13Q07878 ELO1YJL196C 933 nt8.68□□□□□ -1.02
VPS13Q07878 SWT21YNL187W 1074 nt8.68□□□□□ -1.02
VPS13Q07878 VMA11YPL234C 495 nt8.66□□□□□ -1.02
VPS13Q07878 MET1YKR069W 1782 nt8.65□□□□□ -1.02
VPS13Q07878 ITR2YOL103W 1830 nt8.62□□□□□ -1.03
VPS13Q07878 AIM1YAL046C 357 nt8.61□□□□□ -1.03
VPS13Q07878 ATP23YNR020C 813 nt8.61□□□□□ -1.03
VPS13Q07878 KEL3YPL263C 1956 nt8.59□□□□□ -1.03
VPS13Q07878 YKL053WYKL053W 375 nt8.58□□□□□ -1.04
VPS13Q07878 PDC6YGR087C 1692 nt8.57□□□□□ -1.04
VPS13Q07878 PRP4YPR178W 1398 nt8.57□□□□□ -1.04
VPS13Q07878 MDH1YKL085W 1005 nt8.56□□□□□ -1.04
VPS13Q07878 YLR460CYLR460C 1131 nt8.56□□□□□ -1.04
VPS13Q07878 MCP1YOR228C 909 nt8.55□□□□□ -1.04
VPS13Q07878 BIO5YNR056C 1686 nt8.55□□□□□ -1.04
VPS13Q07878 YJL067WYJL067W 351 nt8.55□□□□□ -1.04
VPS13Q07878 LDB7YBL006C 543 nt8.55□□□□□ -1.04
VPS13Q07878 SUN4YNL066W 1263 nt8.55□□□□□ -1.04
VPS13Q07878 ILV3YJR016C 1758 nt8.53□□□□□ -1.04
VPS13Q07878 PTC6YCR079W 1329 nt8.53□□□□□ -1.04
VPS13Q07878 AIM46YHR199C 933 nt8.53□□□□□ -1.04
VPS13Q07878 IMD1YAR073W 1212 nt8.52□□□□□ -1.05
VPS13Q07878 IRC7YFR055W 1023 nt8.51□□□□□ -1.05
VPS13Q07878 YPT11YNL304W 1254 nt8.51□□□□□ -1.05
VPS13Q07878 CWC15YDR163W 528 nt8.51□□□□□ -1.05
VPS13Q07878 SKG1YKR100C 1068 nt8.51□□□□□ -1.05
VPS13Q07878 HAP5YOR358W 729 nt8.51□□□□□ -1.05
VPS13Q07878 OCH1YGL038C 1443 nt8.5□□□□□ -1.05
VPS13Q07878 SAN1YDR143C 1833 nt8.5□□□□□ -1.05
VPS13Q07878 AIM20YIL158W 615 nt8.5□□□□□ -1.05
VPS13Q07878 TRR2YHR106W 1029 nt8.49□□□□□ -1.05
VPS13Q07878 APT1YML022W 564 nt8.49□□□□□ -1.05
VPS13Q07878 ZIM17YNL310C 525 nt8.49□□□□□ -1.05
VPS13Q07878 AAD14YNL331C 1131 nt8.49□□□□□ -1.05
VPS13Q07878 YLR030WYLR030W 792 nt8.49□□□□□ -1.05
VPS13Q07878 GPD2YOL059W 1323 nt8.48□□□□□ -1.05
VPS13Q07878 PNS1YOR161C 1620 nt8.48□□□□□ -1.05
VPS13Q07878 ZAP1YJL056C 2643 nt8.47□□□□□ -1.05
VPS13Q07878 YPT31YER031C 672 nt8.46□□□□□ -1.06
VPS13Q07878 CRC1YOR100C 984 nt8.46□□□□□ -1.06
VPS13Q07878 SCS22YBL091C-A 528 nt8.45□□□□□ -1.06
VPS13Q07878 SPR1YOR190W 1338 nt8.45□□□□□ -1.06
VPS13Q07878 CRN1YLR429W 1956 nt8.45□□□□□ -1.06
VPS13Q07878 SHC1YER096W 1539 nt8.45□□□□□ -1.06
VPS13Q07878 ATP2YJR121W 1536 nt8.45□□□□□ -1.06
VPS13Q07878 YHR219WYHR219W 1875 nt8.44□□□□□ -1.06
VPS13Q07878 YBL111CYBL111C 2004 nt8.43□□□□□ -1.06
VPS13Q07878 YPQ1YOL092W 927 nt8.43□□□□□ -1.06
VPS13Q07878 CHS7YHR142W 951 nt8.43□□□□□ -1.06
VPS13Q07878 CST26YBR042C 1194 nt8.42□□□□□ -1.06
VPS13Q07878 YPL067CYPL067C 597 nt8.41□□□□□ -1.06
VPS13Q07878 YMR265CYMR265C 1386 nt8.41□□□□□ -1.06
VPS13Q07878 BIO3YNR058W 1443 nt8.4□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms