Protein–RNA interactions for Protein: Q03654

CEF1, Pre-mRNA-splicing factor CEF1, yeastyeast

Predicted RBP Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CEF1Q03654 tA(AGC)JtA(AGC)J 73 nt9.08□□□□□ -0.96
CEF1Q03654 tA(AGC)K1tA(AGC)K1 73 nt9.08□□□□□ -0.96
CEF1Q03654 tA(AGC)K2tA(AGC)K2 73 nt9.08□□□□□ -0.96
CEF1Q03654 tA(AGC)LtA(AGC)L 73 nt9.08□□□□□ -0.96
CEF1Q03654 tA(AGC)M1tA(AGC)M1 73 nt9.08□□□□□ -0.96
CEF1Q03654 tA(AGC)M2tA(AGC)M2 73 nt9.08□□□□□ -0.96
CEF1Q03654 tA(AGC)PtA(AGC)P 73 nt9.08□□□□□ -0.96
CEF1Q03654 CBK1YNL161W 2271 nt9.07□□□□□ -0.96
CEF1Q03654 YHL008CYHL008C 1884 nt9.07□□□□□ -0.96
CEF1Q03654 TPC1YGR096W 945 nt9.07□□□□□ -0.96
CEF1Q03654 PHB2YGR231C 933 nt9.07□□□□□ -0.96
CEF1Q03654 LEU2YCL018W 1095 nt9.07□□□□□ -0.96
CEF1Q03654 MET1YKR069W 1782 nt9.07□□□□□ -0.96
CEF1Q03654 RPD3YNL330C 1302 nt9.06□□□□□ -0.96
CEF1Q03654 ADE2YOR128C 1716 nt9.06□□□□□ -0.96
CEF1Q03654 MGM101YJR144W 810 nt9.06□□□□□ -0.96
CEF1Q03654 IPL1YPL209C 1104 nt9.06□□□□□ -0.96
CEF1Q03654 ENO2YHR174W 1314 nt9.05□□□□□ -0.96
CEF1Q03654 HXK1YFR053C 1458 nt9.05□□□□□ -0.96
CEF1Q03654 KRR1YCL059C 951 nt9.05□□□□□ -0.96
CEF1Q03654 snR31snR31 225 nt9.05□□□□□ -0.96
CEF1Q03654 FLX1YIL134W 936 nt9.04□□□□□ -0.96
CEF1Q03654 CRC1YOR100C 984 nt9.04□□□□□ -0.96
CEF1Q03654 RPN14YGL004C 1254 nt9.03□□□□□ -0.96
CEF1Q03654 SNX3YOR357C 489 nt9.03□□□□□ -0.96
CEF1Q03654 ADH3YMR083W 1128 nt9.02□□□□□ -0.97
CEF1Q03654 SPE2YOL052C 1191 nt9.02□□□□□ -0.97
CEF1Q03654 SLG1YOR008C 1137 nt9.02□□□□□ -0.97
CEF1Q03654 NAM8YHR086W 1572 nt9.02□□□□□ -0.97
CEF1Q03654 ADE5,7YGL234W 2409 nt9.02□□□□□ -0.97
CEF1Q03654 TIM44YIL022W 1296 nt9.01□□□□□ -0.97
CEF1Q03654 KRE1YNL322C 942 nt9.01□□□□□ -0.97
CEF1Q03654 ODC1YPL134C 933 nt9.01□□□□□ -0.97
CEF1Q03654 SAN1YDR143C 1833 nt9.01□□□□□ -0.97
CEF1Q03654 TIP1YBR067C 633 nt9□□□□□ -0.97
CEF1Q03654 MAM3YOL060C 2121 nt8.99□□□□□ -0.97
CEF1Q03654 SDS24YBR214W 1584 nt8.99□□□□□ -0.97
CEF1Q03654 SWM1YDR260C 513 nt8.98□□□□□ -0.97
CEF1Q03654 YKL053WYKL053W 375 nt8.98□□□□□ -0.97
CEF1Q03654 REX2YLR059C 810 nt8.98□□□□□ -0.97
CEF1Q03654 DPL1YDR294C 1770 nt8.97□□□□□ -0.97
CEF1Q03654 RPC31YNL151C 756 nt8.97□□□□□ -0.97
CEF1Q03654 RIM2YBR192W 1134 nt8.97□□□□□ -0.97
CEF1Q03654 ALD5YER073W 1563 nt8.97□□□□□ -0.97
CEF1Q03654 YRF1-3YGR296W 5580 nt8.97□□□□□ -0.97
CEF1Q03654 YRF1-6YNL339C 5580 nt8.97□□□□□ -0.97
CEF1Q03654 YRF1-7YPL283C 5580 nt8.97□□□□□ -0.97
CEF1Q03654 VBA3YCL069W 1377 nt8.97□□□□□ -0.97
CEF1Q03654 YCP4YCR004C 744 nt8.95□□□□□ -0.98
CEF1Q03654 KGD2YDR148C 1392 nt8.94□□□□□ -0.98
CEF1Q03654 SRP54YPR088C 1626 nt8.94□□□□□ -0.98
CEF1Q03654 YCR025CYCR025C 411 nt8.93□□□□□ -0.98
CEF1Q03654 MDM35YKL053C-A 261 nt8.93□□□□□ -0.98
CEF1Q03654 YKR012CYKR012C 378 nt8.93□□□□□ -0.98
CEF1Q03654 YHR131CYHR131C 2553 nt8.93□□□□□ -0.98
CEF1Q03654 SRP102YKL154W 735 nt8.92□□□□□ -0.98
CEF1Q03654 ECM10YEL030W 1935 nt8.92□□□□□ -0.98
CEF1Q03654 CYC3YAL039C 810 nt8.91□□□□□ -0.98
CEF1Q03654 SER2YGR208W 930 nt8.89□□□□□ -0.99
CEF1Q03654 MOB1YIL106W 945 nt8.89□□□□□ -0.99
CEF1Q03654 YPT11YNL304W 1254 nt8.89□□□□□ -0.99
CEF1Q03654 LYS20YDL182W 1287 nt8.88□□□□□ -0.99
CEF1Q03654 ENO1YGR254W 1314 nt8.87□□□□□ -0.99
CEF1Q03654 YFR020WYFR020W 699 nt8.87□□□□□ -0.99
CEF1Q03654 SAM50YNL026W 1455 nt8.87□□□□□ -0.99
CEF1Q03654 SBP1YHL034C 885 nt8.86□□□□□ -0.99
CEF1Q03654 YMR316C-BYMR316C-B 309 nt8.86□□□□□ -0.99
CEF1Q03654 HTS1YPR033C 1641 nt8.84□□□□□ -0.99
CEF1Q03654 YEL023CYEL023C 2049 nt8.84□□□□□ -0.99
CEF1Q03654 DMA2YNL116W 1569 nt8.83□□□□□ -1
CEF1Q03654 YGR139WYGR139W 339 nt8.83□□□□□ -1
CEF1Q03654 YJL045WYJL045W 1905 nt8.83□□□□□ -1
CEF1Q03654 GAS1YMR307W 1680 nt8.82□□□□□ -1
CEF1Q03654 THI3YDL080C 1830 nt8.82□□□□□ -1
CEF1Q03654 ECM27YJR106W 2178 nt8.82□□□□□ -1
CEF1Q03654 ERO1YML130C 1692 nt8.81□□□□□ -1
CEF1Q03654 YIA6YIL006W 1122 nt8.81□□□□□ -1
CEF1Q03654 YHR218WYHR218W 1812 nt8.81□□□□□ -1
CEF1Q03654 YMR209CYMR209C 1374 nt8.81□□□□□ -1
CEF1Q03654 YLR280CYLR280C 351 nt8.8□□□□□ -1
CEF1Q03654 YPL041CYPL041C 624 nt8.79□□□□□ -1
CEF1Q03654 PTC6YCR079W 1329 nt8.79□□□□□ -1
CEF1Q03654 GGA2YHR108W 1758 nt8.78□□□□□ -1
CEF1Q03654 RIB1YBL033C 1038 nt8.78□□□□□ -1
CEF1Q03654 LEU4YNL104C 1860 nt8.78□□□□□ -1
CEF1Q03654 tE(CUC)DtE(CUC)D 72 nt8.77□□□□□ -1.01
CEF1Q03654 tE(CUC)ItE(CUC)I 72 nt8.77□□□□□ -1.01
CEF1Q03654 YGR210CYGR210C 1236 nt8.77□□□□□ -1.01
CEF1Q03654 YMR007WYMR007W 381 nt8.76□□□□□ -1.01
CEF1Q03654 GPM1YKL152C 744 nt8.75□□□□□ -1.01
CEF1Q03654 YPL108WYPL108W 507 nt8.74□□□□□ -1.01
CEF1Q03654 AGP3YFL055W 1677 nt8.73□□□□□ -1.01
CEF1Q03654 YIL177CYIL177C 5277 nt8.73□□□□□ -1.01
CEF1Q03654 GUT1YHL032C 2130 nt8.73□□□□□ -1.01
CEF1Q03654 RSM7YJR113C 744 nt8.73□□□□□ -1.01
CEF1Q03654 LPD1YFL018C 1500 nt8.71□□□□□ -1.01
CEF1Q03654 INH1YDL181W 258 nt8.7□□□□□ -1.02
CEF1Q03654 YDR467CYDR467C 327 nt8.7□□□□□ -1.02
CEF1Q03654 TGA1tA(UGC)A 73 nt8.69□□□□□ -1.02
CEF1Q03654 tA(UGC)EtA(UGC)E 73 nt8.69□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 46.3 ms