Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 tA(AGC)DtA(AGC)D 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)FtA(AGC)F 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)GtA(AGC)G 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)HtA(AGC)H 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)JtA(AGC)J 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)K1tA(AGC)K1 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)K2tA(AGC)K2 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)LtA(AGC)L 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)M1tA(AGC)M1 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)M2tA(AGC)M2 73 nt8.64□□□□□ -1.03
NRD1P53617 tA(AGC)PtA(AGC)P 73 nt8.64□□□□□ -1.03
NRD1P53617 CRC1YOR100C 984 nt8.64□□□□□ -1.03
NRD1P53617 SNX3YOR357C 489 nt8.64□□□□□ -1.03
NRD1P53617 LEU2YCL018W 1095 nt8.64□□□□□ -1.03
NRD1P53617 ACO2YJL200C 2370 nt8.64□□□□□ -1.03
NRD1P53617 YKL053WYKL053W 375 nt8.63□□□□□ -1.03
NRD1P53617 NAM8YHR086W 1572 nt8.63□□□□□ -1.03 RIP-Chip
NRD1P53617 TPO4YOR273C 1980 nt8.62□□□□□ -1.03 RIP-Chip
NRD1P53617 PHB2YGR231C 933 nt8.62□□□□□ -1.03
NRD1P53617 ADH3YMR083W 1128 nt8.62□□□□□ -1.03
NRD1P53617 FSH2YMR222C 672 nt8.62□□□□□ -1.03 RIP-Chip
NRD1P53617 ODC1YPL134C 933 nt8.62□□□□□ -1.03
NRD1P53617 URE2YNL229C 1065 nt8.61□□□□□ -1.03
NRD1P53617 YDR008CYDR008C 351 nt8.6□□□□□ -1.03
NRD1P53617 CWP2YKL096W-A 279 nt8.6□□□□□ -1.03
NRD1P53617 IPL1YPL209C 1104 nt8.6□□□□□ -1.03
NRD1P53617 YEL009C-AYEL009C-A 408 nt8.59□□□□□ -1.03
NRD1P53617 RIM2YBR192W 1134 nt8.59□□□□□ -1.03
NRD1P53617 RPN14YGL004C 1254 nt8.58□□□□□ -1.04
NRD1P53617 SLG1YOR008C 1137 nt8.58□□□□□ -1.04 RIP-Chip
NRD1P53617 snR31snR31 225 nt8.58□□□□□ -1.04
NRD1P53617 FLX1YIL134W 936 nt8.57□□□□□ -1.04 RIP-Chip
NRD1P53617 YKR012CYKR012C 378 nt8.57□□□□□ -1.04
NRD1P53617 YMR119W-AYMR119W-A 375 nt8.57□□□□□ -1.04
NRD1P53617 TIM44YIL022W 1296 nt8.56□□□□□ -1.04
NRD1P53617 PEX27YOR193W 1131 nt8.56□□□□□ -1.04
NRD1P53617 SAN1YDR143C 1833 nt8.55□□□□□ -1.04
NRD1P53617 RPC31YNL151C 756 nt8.55□□□□□ -1.04 RIP-Chip
NRD1P53617 KGD2YDR148C 1392 nt8.55□□□□□ -1.04
NRD1P53617 DPL1YDR294C 1770 nt8.54□□□□□ -1.04
NRD1P53617 SDS24YBR214W 1584 nt8.54□□□□□ -1.04
NRD1P53617 REX2YLR059C 810 nt8.54□□□□□ -1.04 RIP-Chip
NRD1P53617 YMR209CYMR209C 1374 nt8.53□□□□□ -1.04
NRD1P53617 GTT3YEL017W 1014 nt8.53□□□□□ -1.04 RIP-Chip
NRD1P53617 MOB1YIL106W 945 nt8.53□□□□□ -1.04
NRD1P53617 SRP54YPR088C 1626 nt8.53□□□□□ -1.04
NRD1P53617 YCR025CYCR025C 411 nt8.52□□□□□ -1.05
NRD1P53617 YAL016C-BYAL016C-B 186 nt8.51□□□□□ -1.05
NRD1P53617 VBA3YCL069W 1377 nt8.5□□□□□ -1.05
NRD1P53617 PUS9YDL036C 1389 nt8.49□□□□□ -1.05 RIP-Chip
NRD1P53617 KRR1YCL059C 951 nt8.49□□□□□ -1.05
NRD1P53617 MDM35YKL053C-A 261 nt8.49□□□□□ -1.05
NRD1P53617 IRC14YOR135C 342 nt8.48□□□□□ -1.05
NRD1P53617 LYS20YDL182W 1287 nt8.47□□□□□ -1.05
NRD1P53617 HAS1YMR290C 1518 nt8.46□□□□□ -1.05
NRD1P53617 CYC3YAL039C 810 nt8.45□□□□□ -1.06
NRD1P53617 DMA2YNL116W 1569 nt8.44□□□□□ -1.06
NRD1P53617 URA8YJR103W 1737 nt8.44□□□□□ -1.06
NRD1P53617 ENO1YGR254W 1314 nt8.44□□□□□ -1.06
NRD1P53617 SAM50YNL026W 1455 nt8.44□□□□□ -1.06
NRD1P53617 SWM1YDR260C 513 nt8.43□□□□□ -1.06
NRD1P53617 SER2YGR208W 930 nt8.43□□□□□ -1.06
NRD1P53617 SBP1YHL034C 885 nt8.43□□□□□ -1.06
NRD1P53617 YCP4YCR004C 744 nt8.42□□□□□ -1.06
NRD1P53617 GAS1YMR307W 1680 nt8.42□□□□□ -1.06
NRD1P53617 LEU4YNL104C 1860 nt8.42□□□□□ -1.06
NRD1P53617 PTC6YCR079W 1329 nt8.41□□□□□ -1.06
NRD1P53617 YPT11YNL304W 1254 nt8.41□□□□□ -1.06
NRD1P53617 THI3YDL080C 1830 nt8.4□□□□□ -1.06 RIP-Chip
NRD1P53617 SRP102YKL154W 735 nt8.4□□□□□ -1.06
NRD1P53617 YFR020WYFR020W 699 nt8.39□□□□□ -1.07
NRD1P53617 YLR280CYLR280C 351 nt8.39□□□□□ -1.07
NRD1P53617 YMR316C-BYMR316C-B 309 nt8.39□□□□□ -1.07
NRD1P53617 ERO1YML130C 1692 nt8.39□□□□□ -1.07
NRD1P53617 HXT10YFL011W 1641 nt8.39□□□□□ -1.07
NRD1P53617 GID7YCL039W 2238 nt8.38□□□□□ -1.07
NRD1P53617 YHL008CYHL008C 1884 nt8.37□□□□□ -1.07
NRD1P53617 YDR467CYDR467C 327 nt8.37□□□□□ -1.07
NRD1P53617 NEJ1YLR265C 1029 nt8.37□□□□□ -1.07 RIP-Chip
NRD1P53617 YPL071CYPL071C 471 nt8.37□□□□□ -1.07 RIP-Chip
NRD1P53617 HTS1YPR033C 1641 nt8.36□□□□□ -1.07
NRD1P53617 YHR218WYHR218W 1812 nt8.36□□□□□ -1.07
NRD1P53617 GGA2YHR108W 1758 nt8.36□□□□□ -1.07 RIP-Chip
NRD1P53617 TGA1tA(UGC)A 73 nt8.36□□□□□ -1.07
NRD1P53617 tA(UGC)EtA(UGC)E 73 nt8.36□□□□□ -1.07
NRD1P53617 tA(UGC)GtA(UGC)G 73 nt8.36□□□□□ -1.07
NRD1P53617 tA(UGC)LtA(UGC)L 73 nt8.36□□□□□ -1.07
NRD1P53617 tA(UGC)OtA(UGC)O 73 nt8.36□□□□□ -1.07
NRD1P53617 GPM1YKL152C 744 nt8.36□□□□□ -1.07
NRD1P53617 YGR210CYGR210C 1236 nt8.35□□□□□ -1.07 RIP-Chip
NRD1P53617 tE(CUC)DtE(CUC)D 72 nt8.34□□□□□ -1.07
NRD1P53617 tE(CUC)ItE(CUC)I 72 nt8.34□□□□□ -1.07
NRD1P53617 PSD1YNL169C 1503 nt8.34□□□□□ -1.08
NRD1P53617 TOM20YGR082W 552 nt8.33□□□□□ -1.08 RIP-Chip
NRD1P53617 LSM12YHR121W 564 nt8.33□□□□□ -1.08 RIP-Chip
NRD1P53617 CUS2YNL286W 858 nt8.32□□□□□ -1.08
NRD1P53617 AGP3YFL055W 1677 nt8.32□□□□□ -1.08
NRD1P53617 NUF2YOL069W 1356 nt8.32□□□□□ -1.08
NRD1P53617 RSM7YJR113C 744 nt8.31□□□□□ -1.08 RIP-Chip
NRD1P53617 ARC19YKL013C 516 nt8.31□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms