Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 YKL133CYKL133C 1392 nt9.61□□□□□ -0.87
VPS8P39702 MRS6YOR370C 1812 nt9.61□□□□□ -0.87
VPS8P39702 YER152W-AYER152W-A 567 nt9.6□□□□□ -0.87
VPS8P39702 RPN14YGL004C 1254 nt9.6□□□□□ -0.87
VPS8P39702 YKL053WYKL053W 375 nt9.6□□□□□ -0.87
VPS8P39702 LSR1LSR1 1175 nt9.59□□□□□ -0.87
VPS8P39702 RCR1YBR005W 642 nt9.59□□□□□ -0.87
VPS8P39702 SRP54YPR088C 1626 nt9.58□□□□□ -0.88
VPS8P39702 YDR510C-AYDR510C-A 117 nt9.58□□□□□ -0.88
VPS8P39702 CRC1YOR100C 984 nt9.58□□□□□ -0.88
VPS8P39702 ERO1YML130C 1692 nt9.58□□□□□ -0.88
VPS8P39702 SFP1YLR403W 2052 nt9.57□□□□□ -0.88
VPS8P39702 YLR280CYLR280C 351 nt9.57□□□□□ -0.88
VPS8P39702 YGR210CYGR210C 1236 nt9.56□□□□□ -0.88
VPS8P39702 TGA1tA(UGC)A 73 nt9.55□□□□□ -0.88
VPS8P39702 tA(UGC)EtA(UGC)E 73 nt9.55□□□□□ -0.88
VPS8P39702 tA(UGC)GtA(UGC)G 73 nt9.55□□□□□ -0.88
VPS8P39702 tA(UGC)LtA(UGC)L 73 nt9.55□□□□□ -0.88
VPS8P39702 tA(UGC)OtA(UGC)O 73 nt9.55□□□□□ -0.88
VPS8P39702 SNX3YOR357C 489 nt9.54□□□□□ -0.88
VPS8P39702 SAN1YDR143C 1833 nt9.54□□□□□ -0.88
VPS8P39702 RPD3YNL330C 1302 nt9.53□□□□□ -0.88
VPS8P39702 GID7YCL039W 2238 nt9.52□□□□□ -0.88
VPS8P39702 YPT11YNL304W 1254 nt9.51□□□□□ -0.89
VPS8P39702 YHR218WYHR218W 1812 nt9.51□□□□□ -0.89
VPS8P39702 FCY1YPR062W 477 nt9.5□□□□□ -0.89
VPS8P39702 SSL2YIL143C 2532 nt9.5□□□□□ -0.89
VPS8P39702 YFR020WYFR020W 699 nt9.49□□□□□ -0.89
VPS8P39702 BUD20YLR074C 501 nt9.48□□□□□ -0.89
VPS8P39702 YPL108WYPL108W 507 nt9.48□□□□□ -0.89
VPS8P39702 KGD2YDR148C 1392 nt9.48□□□□□ -0.89
VPS8P39702 HXT10YFL011W 1641 nt9.47□□□□□ -0.89
VPS8P39702 MDM35YKL053C-A 261 nt9.47□□□□□ -0.89
VPS8P39702 RIM2YBR192W 1134 nt9.46□□□□□ -0.9
VPS8P39702 MCM5YLR274W 2328 nt9.45□□□□□ -0.9
VPS8P39702 KRR1YCL059C 951 nt9.44□□□□□ -0.9
VPS8P39702 CWP2YKL096W-A 279 nt9.44□□□□□ -0.9
VPS8P39702 HXK1YFR053C 1458 nt9.44□□□□□ -0.9
VPS8P39702 TPO4YOR273C 1980 nt9.43□□□□□ -0.9
VPS8P39702 GAS1YMR307W 1680 nt9.42□□□□□ -0.9
VPS8P39702 ALD5YER073W 1563 nt9.42□□□□□ -0.9
VPS8P39702 MAS1YLR163C 1389 nt9.42□□□□□ -0.9
VPS8P39702 SBP1YHL034C 885 nt9.42□□□□□ -0.9
VPS8P39702 ESBP6YNL125C 2022 nt9.41□□□□□ -0.9
VPS8P39702 PTC6YCR079W 1329 nt9.41□□□□□ -0.9
VPS8P39702 YJL160CYJL160C 864 nt9.41□□□□□ -0.9
VPS8P39702 RSM7YJR113C 744 nt9.41□□□□□ -0.9
VPS8P39702 PAU21YOR394W 495 nt9.41□□□□□ -0.9
VPS8P39702 PAU22YPL282C 495 nt9.41□□□□□ -0.9
VPS8P39702 RPC31YNL151C 756 nt9.39□□□□□ -0.91
VPS8P39702 YOR343CYOR343C 327 nt9.39□□□□□ -0.91
VPS8P39702 EMC3YKL207W 762 nt9.38□□□□□ -0.91
VPS8P39702 YOR072WYOR072W 315 nt9.38□□□□□ -0.91
VPS8P39702 GRH1YDR517W 1119 nt9.37□□□□□ -0.91
VPS8P39702 YMR166CYMR166C 1107 nt9.37□□□□□ -0.91
VPS8P39702 YMR210WYMR210W 1350 nt9.36□□□□□ -0.91
VPS8P39702 HRA1HRA1 564 nt9.35□□□□□ -0.91
VPS8P39702 LSP1YPL004C 1026 nt9.35□□□□□ -0.91
VPS8P39702 HMG2YLR450W 3138 nt9.33□□□□□ -0.92
VPS8P39702 DPL1YDR294C 1770 nt9.33□□□□□ -0.92
VPS8P39702 HEM14YER014W 1620 nt9.31□□□□□ -0.92
VPS8P39702 YLR460CYLR460C 1131 nt9.31□□□□□ -0.92
VPS8P39702 Q0010Q0010 387 nt9.31□□□□□ -0.92
VPS8P39702 AGP3YFL055W 1677 nt9.3□□□□□ -0.92
VPS8P39702 NPP1YCR026C 2229 nt9.3□□□□□ -0.92
VPS8P39702 PET18YCR020C 648 nt9.3□□□□□ -0.92
VPS8P39702 RPL12BYDR418W 498 nt9.3□□□□□ -0.92
VPS8P39702 MRP1YDR347W 966 nt9.29□□□□□ -0.92
VPS8P39702 RRT14YIL127C 621 nt9.29□□□□□ -0.92
VPS8P39702 YAL016C-AYAL016C-A 315 nt9.29□□□□□ -0.92
VPS8P39702 GGA2YHR108W 1758 nt9.29□□□□□ -0.92
VPS8P39702 CAK1YFL029C 1107 nt9.28□□□□□ -0.92
VPS8P39702 YMR316C-BYMR316C-B 309 nt9.28□□□□□ -0.92
VPS8P39702 THI3YDL080C 1830 nt9.27□□□□□ -0.93
VPS8P39702 CHS7YHR142W 951 nt9.26□□□□□ -0.93
VPS8P39702 OCH1YGL038C 1443 nt9.25□□□□□ -0.93
VPS8P39702 MET22YOL064C 1074 nt9.25□□□□□ -0.93
VPS8P39702 MEX67YPL169C 1800 nt9.25□□□□□ -0.93
VPS8P39702 NBA1YOL070C 1506 nt9.25□□□□□ -0.93
VPS8P39702 DTR1YBR180W 1719 nt9.25□□□□□ -0.93
VPS8P39702 YER156CYER156C 1017 nt9.23□□□□□ -0.93
VPS8P39702 MFT1YML062C 1179 nt9.23□□□□□ -0.93
VPS8P39702 ADA2YDR448W 1305 nt9.23□□□□□ -0.93
VPS8P39702 GDH1YOR375C 1365 nt9.23□□□□□ -0.93
VPS8P39702 GPM1YKL152C 744 nt9.22□□□□□ -0.93
VPS8P39702 INH1YDL181W 258 nt9.21□□□□□ -0.94
VPS8P39702 UTR5YEL035C 501 nt9.21□□□□□ -0.94
VPS8P39702 PDC6YGR087C 1692 nt9.2□□□□□ -0.94
VPS8P39702 LEU4YNL104C 1860 nt9.2□□□□□ -0.94
VPS8P39702 YDR467CYDR467C 327 nt9.2□□□□□ -0.94
VPS8P39702 OLA1YBR025C 1185 nt9.2□□□□□ -0.94
VPS8P39702 URA8YJR103W 1737 nt9.19□□□□□ -0.94
VPS8P39702 YIR035CYIR035C 765 nt9.18□□□□□ -0.94
VPS8P39702 RNA170RNA170 169 nt9.18□□□□□ -0.94
VPS8P39702 TAD2YJL035C 753 nt9.17□□□□□ -0.94
VPS8P39702 RSC4YKR008W 1878 nt9.17□□□□□ -0.94
VPS8P39702 tL(UAA)B1tL(UAA)B1 84 nt9.16□□□□□ -0.94
VPS8P39702 tL(UAA)B2tL(UAA)B2 84 nt9.16□□□□□ -0.94
VPS8P39702 tL(UAA)DtL(UAA)D 84 nt9.16□□□□□ -0.94
VPS8P39702 SUP51tL(UAA)J 84 nt9.16□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms