Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YLR072WYLR072W 2082 nt6.72□□□□□ -1.33
RPB11P38902 IMO32YGR031W 1029 nt6.72□□□□□ -1.33
RPB11P38902 LEA1YPL213W 717 nt6.72□□□□□ -1.33
RPB11P38902 LSB3YFR024C-A 1380 nt6.71□□□□□ -1.33
RPB11P38902 YJL055WYJL055W 738 nt6.71□□□□□ -1.34
RPB11P38902 MRS4YKR052C 915 nt6.71□□□□□ -1.34
RPB11P38902 ITR1YDR497C 1755 nt6.71□□□□□ -1.34
RPB11P38902 GGA2YHR108W 1758 nt6.7□□□□□ -1.34
RPB11P38902 CAB5YDR196C 726 nt6.7□□□□□ -1.34
RPB11P38902 VRG4YGL225W 1014 nt6.7□□□□□ -1.34
RPB11P38902 YJR114WYJR114W 393 nt6.7□□□□□ -1.34
RPB11P38902 GAL3YDR009W 1563 nt6.69□□□□□ -1.34
RPB11P38902 ADE8YDR408C 645 nt6.69□□□□□ -1.34
RPB11P38902 YLR111WYLR111W 333 nt6.69□□□□□ -1.34
RPB11P38902 ATP10YLR393W 840 nt6.69□□□□□ -1.34
RPB11P38902 CRC1YOR100C 984 nt6.68□□□□□ -1.34
RPB11P38902 PMT7YDR307W 1989 nt6.68□□□□□ -1.34
RPB11P38902 GNP1YDR508C 1992 nt6.68□□□□□ -1.34
RPB11P38902 PRC1YMR297W 1599 nt6.67□□□□□ -1.34
RPB11P38902 YEL034C-AYEL034C-A 603 nt6.67□□□□□ -1.34
RPB11P38902 THI3YDL080C 1830 nt6.66□□□□□ -1.34
RPB11P38902 BEM1YBR200W 1656 nt6.65□□□□□ -1.34
RPB11P38902 GGC1YDL198C 903 nt6.65□□□□□ -1.34
RPB11P38902 SPE4YLR146C 903 nt6.65□□□□□ -1.34
RPB11P38902 YLR437C-AYLR437C-A 228 nt6.65□□□□□ -1.34
RPB11P38902 TOP3YLR234W 1971 nt6.65□□□□□ -1.34
RPB11P38902 CHA1YCL064C 1083 nt6.64□□□□□ -1.35
RPB11P38902 snR86snR86 1004 nt6.64□□□□□ -1.35
RPB11P38902 OPI3YJR073C 621 nt6.64□□□□□ -1.35
RPB11P38902 YMR316C-BYMR316C-B 309 nt6.64□□□□□ -1.35
RPB11P38902 YPL264CYPL264C 1062 nt6.64□□□□□ -1.35
RPB11P38902 FRT1YOR324C 1809 nt6.62□□□□□ -1.35
RPB11P38902 ERG6YML008C 1152 nt6.62□□□□□ -1.35
RPB11P38902 GCD11YER025W 1584 nt6.61□□□□□ -1.35
RPB11P38902 KGD2YDR148C 1392 nt6.61□□□□□ -1.35
RPB11P38902 ESS1YJR017C 513 nt6.61□□□□□ -1.35
RPB11P38902 SWT21YNL187W 1074 nt6.61□□□□□ -1.35
RPB11P38902 HIS3YOR202W 663 nt6.61□□□□□ -1.35
RPB11P38902 ERR3YMR323W 1314 nt6.6□□□□□ -1.35
RPB11P38902 ERR1YOR393W 1314 nt6.6□□□□□ -1.35
RPB11P38902 ERR2YPL281C 1314 nt6.6□□□□□ -1.35
RPB11P38902 ADE2YOR128C 1716 nt6.6□□□□□ -1.35
RPB11P38902 TVP23YDR084C 600 nt6.6□□□□□ -1.35
RPB11P38902 YFL015W-AYFL015W-A 318 nt6.6□□□□□ -1.35
RPB11P38902 SBP1YHL034C 885 nt6.6□□□□□ -1.35
RPB11P38902 AAC3YBR085W 924 nt6.6□□□□□ -1.35
RPB11P38902 NDE2YDL085W 1638 nt6.6□□□□□ -1.35
RPB11P38902 MET1YKR069W 1782 nt6.59□□□□□ -1.35
RPB11P38902 SNU66YOR308C 1764 nt6.59□□□□□ -1.35
RPB11P38902 YFR036W-AYFR036W-A 651 nt6.58□□□□□ -1.36
RPB11P38902 ABP1YCR088W 1779 nt6.58□□□□□ -1.36
RPB11P38902 RIB2YOL066C 1776 nt6.58□□□□□ -1.36
RPB11P38902 GLR1YPL091W 1452 nt6.58□□□□□ -1.36
RPB11P38902 YPI1YFR003C 468 nt6.57□□□□□ -1.36
RPB11P38902 RRT6YGL146C 936 nt6.57□□□□□ -1.36
RPB11P38902 YMR226CYMR226C 804 nt6.57□□□□□ -1.36
RPB11P38902 HXT9YJL219W 1704 nt6.56□□□□□ -1.36
RPB11P38902 TIF3YPR163C 1311 nt6.56□□□□□ -1.36
RPB11P38902 YDR510C-AYDR510C-A 117 nt6.56□□□□□ -1.36
RPB11P38902 YMR253CYMR253C 1245 nt6.56□□□□□ -1.36
RPB11P38902 CTF3YLR381W 2202 nt6.56□□□□□ -1.36
RPB11P38902 YER152CYER152C 1332 nt6.55□□□□□ -1.36
RPB11P38902 TMS1YDR105C 1422 nt6.54□□□□□ -1.36
RPB11P38902 YNL140CYNL140C 570 nt6.54□□□□□ -1.36
RPB11P38902 WSC4YHL028W 1818 nt6.54□□□□□ -1.36
RPB11P38902 SPS100YHR139C 981 nt6.53□□□□□ -1.36
RPB11P38902 YPR126CYPR126C 309 nt6.53□□□□□ -1.36
RPB11P38902 MAM3YOL060C 2121 nt6.53□□□□□ -1.36
RPB11P38902 PMA2YPL036W 2844 nt6.52□□□□□ -1.37
RPB11P38902 PAR32YDL173W 888 nt6.52□□□□□ -1.37
RPB11P38902 LYS20YDL182W 1287 nt6.52□□□□□ -1.37
RPB11P38902 AQR1YNL065W 1761 nt6.52□□□□□ -1.37
RPB11P38902 ECM10YEL030W 1935 nt6.51□□□□□ -1.37
RPB11P38902 RPL2AYFR031C-A 765 nt6.51□□□□□ -1.37
RPB11P38902 YJL009WYJL009W 327 nt6.51□□□□□ -1.37
RPB11P38902 AMF1YOR378W 1548 nt6.5□□□□□ -1.37
RPB11P38902 SAN1YDR143C 1833 nt6.5□□□□□ -1.37
RPB11P38902 SAM50YNL026W 1455 nt6.5□□□□□ -1.37
RPB11P38902 YKL053WYKL053W 375 nt6.5□□□□□ -1.37
RPB11P38902 SNZ1YMR096W 894 nt6.5□□□□□ -1.37
RPB11P38902 ABZ2YMR289W 1125 nt6.49□□□□□ -1.37
RPB11P38902 POB3YML069W 1659 nt6.49□□□□□ -1.37
RPB11P38902 INM1YHR046C 888 nt6.48□□□□□ -1.37
RPB11P38902 IML3YBR107C 738 nt6.48□□□□□ -1.37
RPB11P38902 YNR029CYNR029C 1290 nt6.47□□□□□ -1.37
RPB11P38902 MET13YGL125W 1803 nt6.47□□□□□ -1.37
RPB11P38902 SGF73YGL066W 1974 nt6.47□□□□□ -1.37
RPB11P38902 ADE5,7YGL234W 2409 nt6.47□□□□□ -1.37
RPB11P38902 NDE1YMR145C 1683 nt6.46□□□□□ -1.37
RPB11P38902 GLY1YEL046C 1164 nt6.46□□□□□ -1.38
RPB11P38902 ENO2YHR174W 1314 nt6.46□□□□□ -1.38
RPB11P38902 ATO2YNR002C 849 nt6.44□□□□□ -1.38
RPB11P38902 YNL040WYNL040W 1371 nt6.44□□□□□ -1.38
RPB11P38902 TGL5YOR081C 2250 nt6.43□□□□□ -1.38
RPB11P38902 CCT5YJR064W 1689 nt6.43□□□□□ -1.38
RPB11P38902 RSC9YML127W 1746 nt6.43□□□□□ -1.38
RPB11P38902 BUD31YCR063W 474 nt6.43□□□□□ -1.38
RPB11P38902 APS2YJR058C 444 nt6.43□□□□□ -1.38
RPB11P38902 CTI6YPL181W 1521 nt6.43□□□□□ -1.38
RPB11P38902 GAS1YMR307W 1680 nt6.42□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms