Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 AIM34YMR003W 597 nt8.29□□□□□ -1.08
TDA11P38854 YNR064CYNR064C 873 nt8.29□□□□□ -1.08
TDA11P38854 CCT5YJR064W 1689 nt8.29□□□□□ -1.08
TDA11P38854 SLM3YDL033C 1254 nt8.28□□□□□ -1.08
TDA11P38854 DDI1YER143W 1287 nt8.28□□□□□ -1.08
TDA11P38854 PGC1YPL206C 966 nt8.28□□□□□ -1.08
TDA11P38854 YMC2YBR104W 990 nt8.27□□□□□ -1.09
TDA11P38854 YBR232CYBR232C 360 nt8.27□□□□□ -1.09
TDA11P38854 YJL055WYJL055W 738 nt8.26□□□□□ -1.09
TDA11P38854 RPT5YOR117W 1305 nt8.26□□□□□ -1.09
TDA11P38854 NAP1YKR048C 1254 nt8.25□□□□□ -1.09
TDA11P38854 RRT8YOL048C 1029 nt8.25□□□□□ -1.09
TDA11P38854 TPS1YBR126C 1488 nt8.25□□□□□ -1.09
TDA11P38854 KEL3YPL263C 1956 nt8.24□□□□□ -1.09
TDA11P38854 SEN2YLR105C 1134 nt8.24□□□□□ -1.09
TDA11P38854 PUP1YOR157C 786 nt8.24□□□□□ -1.09
TDA11P38854 ITR1YDR497C 1755 nt8.24□□□□□ -1.09
TDA11P38854 PMT7YDR307W 1989 nt8.24□□□□□ -1.09
TDA11P38854 CRC1YOR100C 984 nt8.23□□□□□ -1.09
TDA11P38854 THI3YDL080C 1830 nt8.23□□□□□ -1.09
TDA11P38854 STP3YLR375W 1032 nt8.22□□□□□ -1.09
TDA11P38854 TMA23YMR269W 636 nt8.22□□□□□ -1.09
TDA11P38854 LEA1YPL213W 717 nt8.22□□□□□ -1.09
TDA11P38854 YIL177CYIL177C 5277 nt8.21□□□□□ -1.1
TDA11P38854 GAL3YDR009W 1563 nt8.21□□□□□ -1.1
TDA11P38854 PRC1YMR297W 1599 nt8.2□□□□□ -1.1
TDA11P38854 YJL118WYJL118W 660 nt8.2□□□□□ -1.1
TDA11P38854 PAU5YFL020C 369 nt8.18□□□□□ -1.1
TDA11P38854 TOP3YLR234W 1971 nt8.18□□□□□ -1.1
TDA11P38854 PMA2YPL036W 2844 nt8.18□□□□□ -1.1
TDA11P38854 ABP1YCR088W 1779 nt8.17□□□□□ -1.1
TDA11P38854 CHA1YCL064C 1083 nt8.17□□□□□ -1.1
TDA11P38854 snR31snR31 225 nt8.17□□□□□ -1.1
TDA11P38854 GGA2YHR108W 1758 nt8.17□□□□□ -1.1
TDA11P38854 IMO32YGR031W 1029 nt8.16□□□□□ -1.1
TDA11P38854 YJR114WYJR114W 393 nt8.16□□□□□ -1.1
TDA11P38854 MRS4YKR052C 915 nt8.16□□□□□ -1.1
TDA11P38854 YMR316C-BYMR316C-B 309 nt8.16□□□□□ -1.1
TDA11P38854 FRT1YOR324C 1809 nt8.16□□□□□ -1.1
TDA11P38854 KGD2YDR148C 1392 nt8.15□□□□□ -1.1
TDA11P38854 snR86snR86 1004 nt8.14□□□□□ -1.11
TDA11P38854 MET1YKR069W 1782 nt8.14□□□□□ -1.11
TDA11P38854 BSP1YPR171W 1731 nt8.14□□□□□ -1.11
TDA11P38854 ADE8YDR408C 645 nt8.13□□□□□ -1.11
TDA11P38854 RIB7YBR153W 735 nt8.13□□□□□ -1.11
TDA11P38854 BEM1YBR200W 1656 nt8.13□□□□□ -1.11
TDA11P38854 YRF1-3YGR296W 5580 nt8.13□□□□□ -1.11
TDA11P38854 YRF1-6YNL339C 5580 nt8.13□□□□□ -1.11
TDA11P38854 YRF1-7YPL283C 5580 nt8.13□□□□□ -1.11
TDA11P38854 YJL064WYJL064W 396 nt8.12□□□□□ -1.11
TDA11P38854 OPI3YJR073C 621 nt8.12□□□□□ -1.11
TDA11P38854 GGC1YDL198C 903 nt8.11□□□□□ -1.11
TDA11P38854 ATP10YLR393W 840 nt8.11□□□□□ -1.11
TDA11P38854 TAF13YML098W 504 nt8.11□□□□□ -1.11
TDA11P38854 SNZ1YMR096W 894 nt8.11□□□□□ -1.11
TDA11P38854 PAU19YMR325W 375 nt8.11□□□□□ -1.11
TDA11P38854 SWT21YNL187W 1074 nt8.11□□□□□ -1.11
TDA11P38854 SPE4YLR146C 903 nt8.1□□□□□ -1.11
TDA11P38854 YPR126CYPR126C 309 nt8.1□□□□□ -1.11
TDA11P38854 HIS3YOR202W 663 nt8.09□□□□□ -1.11
TDA11P38854 YPL264CYPL264C 1062 nt8.09□□□□□ -1.11
TDA11P38854 YEL034C-AYEL034C-A 603 nt8.08□□□□□ -1.12
TDA11P38854 MHF1YOL086W-A 273 nt8.08□□□□□ -1.12
TDA11P38854 AAC3YBR085W 924 nt8.07□□□□□ -1.12
TDA11P38854 HXT9YJL219W 1704 nt8.06□□□□□ -1.12
TDA11P38854 PAR32YDL173W 888 nt8.05□□□□□ -1.12
TDA11P38854 SBP1YHL034C 885 nt8.05□□□□□ -1.12
TDA11P38854 NDE2YDL085W 1638 nt8.04□□□□□ -1.12
TDA11P38854 ERG6YML008C 1152 nt8.04□□□□□ -1.12
TDA11P38854 GSF2YML048W 1212 nt8.04□□□□□ -1.12
TDA11P38854 ERR3YMR323W 1314 nt8.03□□□□□ -1.12
TDA11P38854 ERR1YOR393W 1314 nt8.03□□□□□ -1.12
TDA11P38854 ERR2YPL281C 1314 nt8.03□□□□□ -1.12
TDA11P38854 POT1YIL160C 1254 nt8.03□□□□□ -1.12
TDA11P38854 CTF3YLR381W 2202 nt8.03□□□□□ -1.12
TDA11P38854 WSC4YHL028W 1818 nt8.03□□□□□ -1.12
TDA11P38854 YFR036W-AYFR036W-A 651 nt8.02□□□□□ -1.13
TDA11P38854 YKL053WYKL053W 375 nt8.02□□□□□ -1.13
TDA11P38854 YMR253CYMR253C 1245 nt8.02□□□□□ -1.13
TDA11P38854 TUB4YLR212C 1422 nt8.02□□□□□ -1.13
TDA11P38854 YER152CYER152C 1332 nt8.02□□□□□ -1.13
TDA11P38854 LYS20YDL182W 1287 nt8.01□□□□□ -1.13
TDA11P38854 MET13YGL125W 1803 nt8.01□□□□□ -1.13
TDA11P38854 SAN1YDR143C 1833 nt8□□□□□ -1.13
TDA11P38854 CTI6YPL181W 1521 nt7.99□□□□□ -1.13
TDA11P38854 TVP23YDR084C 600 nt7.99□□□□□ -1.13
TDA11P38854 AFG2YLR397C 2343 nt7.99□□□□□ -1.13
TDA11P38854 IML3YBR107C 738 nt7.99□□□□□ -1.13
TDA11P38854 RRT6YGL146C 936 nt7.98□□□□□ -1.13
TDA11P38854 NIF3YGL221C 867 nt7.98□□□□□ -1.13
TDA11P38854 SLG1YOR008C 1137 nt7.98□□□□□ -1.13
TDA11P38854 FRA1YLL029W 2250 nt7.98□□□□□ -1.13
TDA11P38854 TIF3YPR163C 1311 nt7.97□□□□□ -1.13
TDA11P38854 ADE5,7YGL234W 2409 nt7.96□□□□□ -1.14
TDA11P38854 APS2YJR058C 444 nt7.96□□□□□ -1.14
TDA11P38854 NDE1YMR145C 1683 nt7.95□□□□□ -1.14
TDA11P38854 TMS1YDR105C 1422 nt7.95□□□□□ -1.14
TDA11P38854 SGF73YGL066W 1974 nt7.95□□□□□ -1.14
TDA11P38854 AQR1YNL065W 1761 nt7.95□□□□□ -1.14
TDA11P38854 SAM50YNL026W 1455 nt7.94□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms