Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 TOM6YOR045W 186 nt7.68□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)BtD(GUC)B 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)DtD(GUC)D 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)G1tD(GUC)G1 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)G2tD(GUC)G2 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)I1tD(GUC)I1 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)I2tD(GUC)I2 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)J1tD(GUC)J1 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)J2tD(GUC)J2 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)J3tD(GUC)J3 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)J4tD(GUC)J4 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)KtD(GUC)K 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)L1tD(GUC)L1 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)L2tD(GUC)L2 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)MtD(GUC)M 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 tD(GUC)OtD(GUC)O 72 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 SAM1YLR180W 1149 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 NEJ1YLR265C 1029 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 DIA1YMR316W 1011 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 LSR1LSR1 1175 nt7.67□□□□□ -1.18
TY1A-LR2P0CX72 HEM13YDR044W 987 nt7.66□□□□□ -1.18
TY1A-LR2P0CX72 TVP23YDR084C 600 nt7.66□□□□□ -1.18
TY1A-LR2P0CX72 ISY1YJR050W 708 nt7.66□□□□□ -1.18
TY1A-LR2P0CX72 PEX22YAL055W 543 nt7.66□□□□□ -1.18
TY1A-LR2P0CX72 ARR1YPR199C 885 nt7.66□□□□□ -1.18
TY1A-LR2P0CX72 MTG2YHR168W 1557 nt7.66□□□□□ -1.18
TY1A-LR2P0CX72 MMS2YGL087C 414 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 DUR3YHL016C 2208 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 NEM1YHR004C 1341 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 TRT2tT(CGU)K 72 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 REV7YIL139C 738 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 RSA3YLR221C 663 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 NMD4YLR363C 657 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 OST3YOR085W 1053 nt7.65□□□□□ -1.18
TY1A-LR2P0CX72 SFA1YDL168W 1161 nt7.64□□□□□ -1.19
TY1A-LR2P0CX72 TRP1YDR007W 675 nt7.64□□□□□ -1.19
TY1A-LR2P0CX72 ERP5YHR110W 639 nt7.64□□□□□ -1.19
TY1A-LR2P0CX72 MIM1YOL026C 342 nt7.64□□□□□ -1.19
TY1A-LR2P0CX72 INP54YOL065C 1155 nt7.64□□□□□ -1.19
TY1A-LR2P0CX72 TIF6YPR016C 738 nt7.64□□□□□ -1.19
TY1A-LR2P0CX72 LPD1YFL018C 1500 nt7.63□□□□□ -1.19
TY1A-LR2P0CX72 YJR115WYJR115W 510 nt7.63□□□□□ -1.19
TY1A-LR2P0CX72 YAR028WYAR028W 705 nt7.63□□□□□ -1.19
TY1A-LR2P0CX72 YLR412C-AYLR412C-A 207 nt7.63□□□□□ -1.19
TY1A-LR2P0CX72 HBS1YKR084C 1836 nt7.63□□□□□ -1.19
TY1A-LR2P0CX72 RPD3YNL330C 1302 nt7.62□□□□□ -1.19
TY1A-LR2P0CX72 EDC1YGL222C 528 nt7.62□□□□□ -1.19
TY1A-LR2P0CX72 TIM44YIL022W 1296 nt7.62□□□□□ -1.19
TY1A-LR2P0CX72 YET2YMR040W 483 nt7.62□□□□□ -1.19
TY1A-LR2P0CX72 GFD1YMR255W 567 nt7.62□□□□□ -1.19
TY1A-LR2P0CX72 DLD3YEL071W 1491 nt7.62□□□□□ -1.19
TY1A-LR2P0CX72 DUS3YLR401C 2007 nt7.61□□□□□ -1.19
TY1A-LR2P0CX72 PEX27YOR193W 1131 nt7.61□□□□□ -1.19
TY1A-LR2P0CX72 KTR3YBR205W 1215 nt7.61□□□□□ -1.19
TY1A-LR2P0CX72 DPB2YPR175W 2070 nt7.61□□□□□ -1.19
TY1A-LR2P0CX72 VPS28YPL065W 729 nt7.6□□□□□ -1.19
TY1A-LR2P0CX72 POS5YPL188W 1245 nt7.6□□□□□ -1.19
TY1A-LR2P0CX72 DPL1YDR294C 1770 nt7.6□□□□□ -1.19
TY1A-LR2P0CX72 WHI4YDL224C 1950 nt7.59□□□□□ -1.19
TY1A-LR2P0CX72 YMR262WYMR262W 942 nt7.59□□□□□ -1.19
TY1A-LR2P0CX72 GPI18YBR004C 1302 nt7.58□□□□□ -1.2
TY1A-LR2P0CX72 YHL019W-AYHL019W-A 594 nt7.58□□□□□ -1.2
TY1A-LR2P0CX72 YMR103CYMR103C 363 nt7.58□□□□□ -1.2
TY1A-LR2P0CX72 RIM2YBR192W 1134 nt7.58□□□□□ -1.2
TY1A-LR2P0CX72 UTH1YKR042W 1098 nt7.57□□□□□ -1.2
TY1A-LR2P0CX72 PEX25YPL112C 1185 nt7.57□□□□□ -1.2
TY1A-LR2P0CX72 SAS4YDR181C 1446 nt7.57□□□□□ -1.2
TY1A-LR2P0CX72 DML1YMR211W 1428 nt7.57□□□□□ -1.2
TY1A-LR2P0CX72 TPN1YGL186C 1740 nt7.57□□□□□ -1.2
TY1A-LR2P0CX72 ARO10YDR380W 1908 nt7.56□□□□□ -1.2
TY1A-LR2P0CX72 MED2YDL005C 1296 nt7.56□□□□□ -1.2
TY1A-LR2P0CX72 AIR1YIL079C 1083 nt7.56□□□□□ -1.2
TY1A-LR2P0CX72 MHO1YJR008W 1017 nt7.56□□□□□ -1.2
TY1A-LR2P0CX72 AIM2YAL049C 741 nt7.56□□□□□ -1.2
TY1A-LR2P0CX72 RRP40YOL142W 723 nt7.56□□□□□ -1.2
TY1A-LR2P0CX72 LSM5YER146W 282 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 tL(GAG)GtL(GAG)G 82 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 PEX2YJL210W 816 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 RBG1YAL036C 1110 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 OMA1YKR087C 1038 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 RUF21RUF21 707 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 PHA2YNL316C 1005 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 ITR2YOL103W 1830 nt7.55□□□□□ -1.2
TY1A-LR2P0CX72 LEU4YNL104C 1860 nt7.54□□□□□ -1.2
TY1A-LR2P0CX72 TSR2YLR435W 618 nt7.54□□□□□ -1.2
TY1A-LR2P0CX72 TSR3YOR006C 942 nt7.54□□□□□ -1.2
TY1A-LR2P0CX72 MUM3YOR298W 1440 nt7.53□□□□□ -1.2
TY1A-LR2P0CX72 PET18YCR020C 648 nt7.53□□□□□ -1.2
TY1A-LR2P0CX72 YIR017W-AYIR017W-A 600 nt7.53□□□□□ -1.2
TY1A-LR2P0CX72 AIM1YAL046C 357 nt7.53□□□□□ -1.2
TY1A-LR2P0CX72 ADD66YKL206C 804 nt7.53□□□□□ -1.2
TY1A-LR2P0CX72 PRE6YOL038W 765 nt7.53□□□□□ -1.2
TY1A-LR2P0CX72 HIP1YGR191W 1812 nt7.52□□□□□ -1.2
TY1A-LR2P0CX72 NPP2YEL016C 1482 nt7.52□□□□□ -1.21
TY1A-LR2P0CX72 RTN1YDR233C 888 nt7.52□□□□□ -1.21
TY1A-LR2P0CX72 YNL319WYNL319W 441 nt7.52□□□□□ -1.21
TY1A-LR2P0CX72 VAM3YOR106W 852 nt7.52□□□□□ -1.21
TY1A-LR2P0CX72 YDR010CYDR010C 333 nt7.51□□□□□ -1.21
TY1A-LR2P0CX72 YPR1YDR368W 939 nt7.51□□□□□ -1.21
TY1A-LR2P0CX72 RPC31YNL151C 756 nt7.51□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 69.6 ms