Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 COS10YNR075W 1125 nt13.04□□□□□ -0.32
TY2B-LR1P0C2J3 OPI10YOL032W 741 nt13.04□□□□□ -0.32
TY2B-LR1P0C2J3 CCT2YIL142W 1584 nt13.04□□□□□ -0.32
TY2B-LR1P0C2J3 ITR2YOL103W 1830 nt13.04□□□□□ -0.32
TY2B-LR1P0C2J3 YAT1YAR035W 2064 nt13.03□□□□□ -0.32
TY2B-LR1P0C2J3 TAD2YJL035C 753 nt13.03□□□□□ -0.32
TY2B-LR1P0C2J3 YLR358CYLR358C 564 nt13.02□□□□□ -0.32
TY2B-LR1P0C2J3 NUP53YMR153W 1428 nt13.01□□□□□ -0.33
TY2B-LR1P0C2J3 MFT1YML062C 1179 nt12.99□□□□□ -0.33
TY2B-LR1P0C2J3 SBP1YHL034C 885 nt12.99□□□□□ -0.33
TY2B-LR1P0C2J3 YOR325WYOR325W 474 nt12.99□□□□□ -0.33
TY2B-LR1P0C2J3 YER156CYER156C 1017 nt12.98□□□□□ -0.33
TY2B-LR1P0C2J3 RPS6AYPL090C 711 nt12.98□□□□□ -0.33
TY2B-LR1P0C2J3 RPS6BYBR181C 711 nt12.98□□□□□ -0.33
TY2B-LR1P0C2J3 PBP1YGR178C 2169 nt12.97□□□□□ -0.33
TY2B-LR1P0C2J3 BXI1YNL305C 894 nt12.97□□□□□ -0.33
TY2B-LR1P0C2J3 TDH1YJL052W 999 nt12.95□□□□□ -0.34
TY2B-LR1P0C2J3 NCA3YJL116C 1014 nt12.95□□□□□ -0.34
TY2B-LR1P0C2J3 ENT4YLL038C 744 nt12.95□□□□□ -0.34
TY2B-LR1P0C2J3 CRC1YOR100C 984 nt12.95□□□□□ -0.34
TY2B-LR1P0C2J3 KEL3YPL263C 1956 nt12.94□□□□□ -0.34
TY2B-LR1P0C2J3 LSR1LSR1 1175 nt12.93□□□□□ -0.34
TY2B-LR1P0C2J3 VMA11YPL234C 495 nt12.92□□□□□ -0.34
TY2B-LR1P0C2J3 HAP5YOR358W 729 nt12.92□□□□□ -0.34
TY2B-LR1P0C2J3 SAN1YDR143C 1833 nt12.91□□□□□ -0.34
TY2B-LR1P0C2J3 YIL100C-AYIL100C-A 339 nt12.91□□□□□ -0.34
TY2B-LR1P0C2J3 DLD3YEL071W 1491 nt12.9□□□□□ -0.34
TY2B-LR1P0C2J3 HAC1YFL031W 717 nt12.89□□□□□ -0.35
TY2B-LR1P0C2J3 YIL168WYIL168W 384 nt12.89□□□□□ -0.35
TY2B-LR1P0C2J3 RIM2YBR192W 1134 nt12.89□□□□□ -0.35
TY2B-LR1P0C2J3 YPT11YNL304W 1254 nt12.88□□□□□ -0.35
TY2B-LR1P0C2J3 PTC6YCR079W 1329 nt12.88□□□□□ -0.35
TY2B-LR1P0C2J3 YMR265CYMR265C 1386 nt12.88□□□□□ -0.35
TY2B-LR1P0C2J3 SRY1YKL218C 981 nt12.86□□□□□ -0.35
TY2B-LR1P0C2J3 ILV3YJR016C 1758 nt12.85□□□□□ -0.35
TY2B-LR1P0C2J3 RRT6YGL146C 936 nt12.85□□□□□ -0.35
TY2B-LR1P0C2J3 NAR1YNL240C 1476 nt12.83□□□□□ -0.35
TY2B-LR1P0C2J3 KGD2YDR148C 1392 nt12.82□□□□□ -0.36
TY2B-LR1P0C2J3 RPR1RPR1 369 nt12.82□□□□□ -0.36
TY2B-LR1P0C2J3 YPR084WYPR084W 1371 nt12.81□□□□□ -0.36
TY2B-LR1P0C2J3 OCH1YGL038C 1443 nt12.8□□□□□ -0.36
TY2B-LR1P0C2J3 CAK1YFL029C 1107 nt12.79□□□□□ -0.36
TY2B-LR1P0C2J3 YFR020WYFR020W 699 nt12.79□□□□□ -0.36
TY2B-LR1P0C2J3 MET22YOL064C 1074 nt12.79□□□□□ -0.36
TY2B-LR1P0C2J3 snR31snR31 225 nt12.79□□□□□ -0.36
TY2B-LR1P0C2J3 YML079WYML079W 606 nt12.76□□□□□ -0.37
TY2B-LR1P0C2J3 SPG1YGR236C 288 nt12.75□□□□□ -0.37
TY2B-LR1P0C2J3 YBL095WYBL095W 813 nt12.74□□□□□ -0.37
TY2B-LR1P0C2J3 RRT14YIL127C 621 nt12.71□□□□□ -0.37
TY2B-LR1P0C2J3 URA1YKL216W 945 nt12.71□□□□□ -0.37
TY2B-LR1P0C2J3 SHC1YER096W 1539 nt12.71□□□□□ -0.38
TY2B-LR1P0C2J3 CYT2YKL087C 675 nt12.71□□□□□ -0.38
TY2B-LR1P0C2J3 GAS1YMR307W 1680 nt12.7□□□□□ -0.38
TY2B-LR1P0C2J3 YHR219WYHR219W 1875 nt12.7□□□□□ -0.38
TY2B-LR1P0C2J3 RDN25-1RDN25-1 3396 nt12.7□□□□□ -0.38
TY2B-LR1P0C2J3 RDN25-2RDN25-2 3396 nt12.7□□□□□ -0.38
TY2B-LR1P0C2J3 RSM7YJR113C 744 nt12.69□□□□□ -0.38
TY2B-LR1P0C2J3 RPC82YPR190C 1965 nt12.69□□□□□ -0.38
TY2B-LR1P0C2J3 MRS6YOR370C 1812 nt12.69□□□□□ -0.38
TY2B-LR1P0C2J3 GID8YMR135C 1368 nt12.68□□□□□ -0.38
TY2B-LR1P0C2J3 PUP2YGR253C 783 nt12.68□□□□□ -0.38
TY2B-LR1P0C2J3 CHS7YHR142W 951 nt12.68□□□□□ -0.38
TY2B-LR1P0C2J3 SNX3YOR357C 489 nt12.66□□□□□ -0.38
TY2B-LR1P0C2J3 ALG12YNR030W 1656 nt12.65□□□□□ -0.38
TY2B-LR1P0C2J3 RPN14YGL004C 1254 nt12.64□□□□□ -0.39
TY2B-LR1P0C2J3 CYS3YAL012W 1185 nt12.62□□□□□ -0.39
TY2B-LR1P0C2J3 YKL133CYKL133C 1392 nt12.62□□□□□ -0.39
TY2B-LR1P0C2J3 APT1YML022W 564 nt12.61□□□□□ -0.39
TY2B-LR1P0C2J3 PIH1YHR034C 1035 nt12.59□□□□□ -0.39
TY2B-LR1P0C2J3 YJL144WYJL144W 315 nt12.59□□□□□ -0.39
TY2B-LR1P0C2J3 YLR460CYLR460C 1131 nt12.58□□□□□ -0.39
TY2B-LR1P0C2J3 YDR476CYDR476C 675 nt12.57□□□□□ -0.4
TY2B-LR1P0C2J3 INA1YLR413W 2028 nt12.57□□□□□ -0.4
TY2B-LR1P0C2J3 RHO1YPR165W 630 nt12.55□□□□□ -0.4
TY2B-LR1P0C2J3 ARO8YGL202W 1503 nt12.54□□□□□ -0.4
TY2B-LR1P0C2J3 YAL019W-AYAL019W-A 570 nt12.53□□□□□ -0.4
TY2B-LR1P0C2J3 PDC6YGR087C 1692 nt12.53□□□□□ -0.4
TY2B-LR1P0C2J3 RNA170RNA170 169 nt12.53□□□□□ -0.4
TY2B-LR1P0C2J3 YOR111WYOR111W 699 nt12.53□□□□□ -0.4
TY2B-LR1P0C2J3 UME1YPL139C 1383 nt12.52□□□□□ -0.4
TY2B-LR1P0C2J3 YPT31YER031C 672 nt12.52□□□□□ -0.41
TY2B-LR1P0C2J3 SPR1YOR190W 1338 nt12.52□□□□□ -0.41
TY2B-LR1P0C2J3 MAS2YHR024C 1449 nt12.51□□□□□ -0.41
TY2B-LR1P0C2J3 YHL030W-AYHL030W-A 462 nt12.51□□□□□ -0.41
TY2B-LR1P0C2J3 SLM3YDL033C 1254 nt12.5□□□□□ -0.41
TY2B-LR1P0C2J3 DOC1YGL240W 753 nt12.48□□□□□ -0.41
TY2B-LR1P0C2J3 ATP23YNR020C 813 nt12.48□□□□□ -0.41
TY2B-LR1P0C2J3 KES1YPL145C 1305 nt12.48□□□□□ -0.41
TY2B-LR1P0C2J3 LAT1YNL071W 1449 nt12.47□□□□□ -0.41
TY2B-LR1P0C2J3 YMR316C-BYMR316C-B 309 nt12.46□□□□□ -0.42
TY2B-LR1P0C2J3 ESBP6YNL125C 2022 nt12.45□□□□□ -0.42
TY2B-LR1P0C2J3 THI3YDL080C 1830 nt12.45□□□□□ -0.42
TY2B-LR1P0C2J3 PUS4YNL292W 1212 nt12.45□□□□□ -0.42
TY2B-LR1P0C2J3 NVJ2YPR091C 2313 nt12.44□□□□□ -0.42
TY2B-LR1P0C2J3 ATP2YJR121W 1536 nt12.44□□□□□ -0.42
TY2B-LR1P0C2J3 YOX1YML027W 1158 nt12.42□□□□□ -0.42
TY2B-LR1P0C2J3 COQ8YGL119W 1506 nt12.42□□□□□ -0.42
TY2B-LR1P0C2J3 THI73YLR004C 1572 nt12.41□□□□□ -0.42
TY2B-LR1P0C2J3 SPE3YPR069C 882 nt12.41□□□□□ -0.42
TY2B-LR1P0C2J3 PSP2YML017W 1782 nt12.41□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms