Protein–RNA interactions for Protein: Q06677

SWA2, Auxilin-like clathrin uncoating factor SWA2, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWA2Q06677 ANS1YHR126C 480 nt1.06□□□□□ -2.24
SWA2Q06677 PRP16YKR086W 3216 nt1.06□□□□□ -2.24
SWA2Q06677 BFR2YDR299W 1605 nt1.06□□□□□ -2.24
SWA2Q06677 BEM2YER155C 6504 nt1.05□□□□□ -2.24
SWA2Q06677 YLR041WYLR041W 321 nt1.05□□□□□ -2.24
SWA2Q06677 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
SWA2Q06677 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
SWA2Q06677 YGR151CYGR151C 336 nt1.04□□□□□ -2.24
SWA2Q06677 BUD3YCL014W 4911 nt1.03□□□□□ -2.24
SWA2Q06677 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
SWA2Q06677 PRP42YDR235W 1635 nt1.03□□□□□ -2.24
SWA2Q06677 YPR160W-AYPR160W-A 81 nt1.02□□□□□ -2.25
SWA2Q06677 FYV10YIL097W 1551 nt1.01□□□□□ -2.25
SWA2Q06677 PRP5YBR237W 2550 nt1.01□□□□□ -2.25
SWA2Q06677 YLR399W-AYLR399W-A 105 nt1.01□□□□□ -2.25
SWA2Q06677 UTP8YGR128C 2142 nt1.01□□□□□ -2.25
SWA2Q06677 tV(UAC)BtV(UAC)B 74 nt1□□□□□ -2.25
SWA2Q06677 tV(UAC)DtV(UAC)D 74 nt1□□□□□ -2.25
SWA2Q06677 YPR117WYPR117W 7470 nt0.99□□□□□ -2.25
SWA2Q06677 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
SWA2Q06677 YGR130CYGR130C 2451 nt0.98□□□□□ -2.25
SWA2Q06677 YOR381W-AYOR381W-A 168 nt0.98□□□□□ -2.25
SWA2Q06677 SIP4YJL089W 2490 nt0.98□□□□□ -2.25
SWA2Q06677 TRS65YGR166W 1683 nt0.97□□□□□ -2.25
SWA2Q06677 UBP3YER151C 2739 nt0.97□□□□□ -2.25
SWA2Q06677 YDL073WYDL073W 2955 nt0.96□□□□□ -2.26
SWA2Q06677 tN(GUU)QtN(GUU)Q 71 nt0.93□□□□□ -2.26
SWA2Q06677 YGL182CYGL182C 324 nt0.92□□□□□ -2.26
SWA2Q06677 YHR131W-AYHR131W-A 246 nt0.92□□□□□ -2.26
SWA2Q06677 YBL039C-AYBL039C-A 84 nt0.92□□□□□ -2.26
SWA2Q06677 YNL338WYNL338W 159 nt0.92□□□□□ -2.26
SWA2Q06677 TAH1YCR060W 336 nt0.91□□□□□ -2.26
SWA2Q06677 RKR1YMR247C 4689 nt0.9□□□□□ -2.26
SWA2Q06677 YLR232WYLR232W 348 nt0.9□□□□□ -2.27
SWA2Q06677 YLR294CYLR294C 330 nt0.89□□□□□ -2.27
SWA2Q06677 CHS6YJL099W 2241 nt0.89□□□□□ -2.27
SWA2Q06677 OST4YDL232W 111 nt0.88□□□□□ -2.27
SWA2Q06677 SNU13YEL026W 381 nt0.88□□□□□ -2.27
SWA2Q06677 YOR170WYOR170W 306 nt0.87□□□□□ -2.27
SWA2Q06677 YSP1YHR155W 3687 nt0.87□□□□□ -2.27
SWA2Q06677 snR48snR48 113 nt0.85□□□□□ -2.27
SWA2Q06677 PAU24YBR301W 363 nt0.85□□□□□ -2.27
SWA2Q06677 BEM3YPL115C 3387 nt0.84□□□□□ -2.28
SWA2Q06677 YHL015W-AYHL015W-A 84 nt0.81□□□□□ -2.28
SWA2Q06677 YOR102WYOR102W 351 nt0.81□□□□□ -2.28
SWA2Q06677 RPM2YML091C 3609 nt0.81□□□□□ -2.28
SWA2Q06677 YDR544CYDR544C 429 nt0.79□□□□□ -2.28
SWA2Q06677 YJL127W-AYJL127W-A 117 nt0.79□□□□□ -2.28
SWA2Q06677 SEC1YDR164C 2175 nt0.79□□□□□ -2.28
SWA2Q06677 LTE1YAL024C 4308 nt0.78□□□□□ -2.28
SWA2Q06677 YBL053WYBL053W 375 nt0.77□□□□□ -2.29
SWA2Q06677 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
SWA2Q06677 YOR314W-AYOR314W-A 111 nt0.76□□□□□ -2.29
SWA2Q06677 tL(UAA)QtL(UAA)Q 85 nt0.75□□□□□ -2.29
SWA2Q06677 COG6YNL041C 2520 nt0.75□□□□□ -2.29
SWA2Q06677 YDL007C-AYDL007C-A 258 nt0.74□□□□□ -2.29
SWA2Q06677 YOR329W-AYOR329W-A 210 nt0.74□□□□□ -2.29
SWA2Q06677 YBR072C-AYBR072C-A 162 nt0.74□□□□□ -2.29
SWA2Q06677 ULP2YIL031W 3105 nt0.74□□□□□ -2.29
SWA2Q06677 NNF2YGR089W 2811 nt0.74□□□□□ -2.29
SWA2Q06677 GLG1YKR058W 1851 nt0.72□□□□□ -2.29
SWA2Q06677 SDH6YDR379C-A 240 nt0.71□□□□□ -2.3
SWA2Q06677 YLL006W-AYLL006W-A 177 nt0.71□□□□□ -2.3
SWA2Q06677 tM(CAU)Q2tM(CAU)Q2 78 nt0.69□□□□□ -2.3
SWA2Q06677 STF2YGR008C 255 nt0.69□□□□□ -2.3
SWA2Q06677 PET111YMR257C 2403 nt0.69□□□□□ -2.3
SWA2Q06677 QCR9YGR183C 201 nt0.68□□□□□ -2.3
SWA2Q06677 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
SWA2Q06677 YOR192C-BYOR192C-B 5313 nt0.68□□□□□ -2.3
SWA2Q06677 HUG1YML058W-A 207 nt0.67□□□□□ -2.3
SWA2Q06677 snR39BsnR39B 96 nt0.67□□□□□ -2.3
SWA2Q06677 NIP1YMR309C 2439 nt0.66□□□□□ -2.3
SWA2Q06677 BUL2YML111W 2763 nt0.65□□□□□ -2.3
SWA2Q06677 YDR210WYDR210W 228 nt0.65□□□□□ -2.31
SWA2Q06677 PAU12YGR294W 363 nt0.65□□□□□ -2.31
SWA2Q06677 YIL142C-AYIL142C-A 333 nt0.65□□□□□ -2.31
SWA2Q06677 RPS26AYGL189C 360 nt0.63□□□□□ -2.31
SWA2Q06677 YNL067W-BYNL067W-B 141 nt0.63□□□□□ -2.31
SWA2Q06677 YDR371C-AYDR371C-A 105 nt0.62□□□□□ -2.31
SWA2Q06677 YGR164WYGR164W 336 nt0.62□□□□□ -2.31
SWA2Q06677 YGR146C-AYGR146C-A 162 nt0.61□□□□□ -2.31
SWA2Q06677 MLP1YKR095W 5628 nt0.6□□□□□ -2.31
SWA2Q06677 UTP10YJL109C 5310 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
SWA2Q06677 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
SWA2Q06677 CSE1YGL238W 2883 nt0.57□□□□□ -2.32
SWA2Q06677 UTP20YBL004W 7482 nt0.56□□□□□ -2.32
SWA2Q06677 SBH1YER087C-B 249 nt0.56□□□□□ -2.32
SWA2Q06677 ORC3YLL004W 1851 nt0.55□□□□□ -2.32
SWA2Q06677 YMR160WYMR160W 2451 nt0.54□□□□□ -2.32
SWA2Q06677 RCO1YMR075W 2055 nt0.52□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 49.9 ms