Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 YOR015WYOR015W 360 nt0.31□□□□□ -2.36
VPS9P54787 YDL240C-AYDL240C-A 138 nt0.29□□□□□ -2.36
VPS9P54787 YGL149WYGL149W 306 nt0.29□□□□□ -2.36
VPS9P54787 YGR069WYGR069W 336 nt0.29□□□□□ -2.36
VPS9P54787 BLI1YKL061W 342 nt0.29□□□□□ -2.36
VPS9P54787 YNL028WYNL028W 318 nt0.29□□□□□ -2.36
VPS9P54787 YNL146WYNL146W 303 nt0.29□□□□□ -2.36
VPS9P54787 YFL032WYFL032W 321 nt0.28□□□□□ -2.36
VPS9P54787 ATP6Q0085 780 nt0.27□□□□□ -2.37
VPS9P54787 YLR041WYLR041W 321 nt0.27□□□□□ -2.37
VPS9P54787 NIP1YMR309C 2439 nt0.26□□□□□ -2.37
VPS9P54787 RCO1YMR075W 2055 nt0.25□□□□□ -2.37
VPS9P54787 BIR1YJR089W 2865 nt0.25□□□□□ -2.37
VPS9P54787 YLR120W-AYLR120W-A 102 nt0.24□□□□□ -2.37
VPS9P54787 YOL013W-AYOL013W-A 192 nt0.24□□□□□ -2.37
VPS9P54787 YOR072W-BYOR072W-B 162 nt0.23□□□□□ -2.37
VPS9P54787 YNL054W-BYNL054W-B 5250 nt0.23□□□□□ -2.37
VPS9P54787 YHR131W-AYHR131W-A 246 nt0.22□□□□□ -2.37
VPS9P54787 YKL100W-AYKL100W-A 90 nt0.21□□□□□ -2.38
VPS9P54787 YDR413CYDR413C 576 nt0.2□□□□□ -2.38
VPS9P54787 SNU13YEL026W 381 nt0.2□□□□□ -2.38
VPS9P54787 YER097WYER097W 330 nt0.2□□□□□ -2.38
VPS9P54787 YLL006W-AYLL006W-A 177 nt0.2□□□□□ -2.38
VPS9P54787 BUL2YML111W 2763 nt0.19□□□□□ -2.38
VPS9P54787 ESP1YGR098C 4893 nt0.19□□□□□ -2.38
VPS9P54787 snR74snR74 88 nt0.19□□□□□ -2.38
VPS9P54787 RAD61YDR014W 1944 nt0.19□□□□□ -2.38
VPS9P54787 GIM4YEL003W 336 nt0.18□□□□□ -2.38
VPS9P54787 STE5YDR103W 2754 nt0.17□□□□□ -2.38
VPS9P54787 YER053C-AYER053C-A 114 nt0.17□□□□□ -2.38
VPS9P54787 YKL118WYKL118W 312 nt0.17□□□□□ -2.38
VPS9P54787 COX12YLR038C 252 nt0.17□□□□□ -2.38
VPS9P54787 YDR366CYDR366C 399 nt0.16□□□□□ -2.38
VPS9P54787 MLP2YIL149C 5040 nt0.14□□□□□ -2.39
VPS9P54787 RPL39YJL189W 156 nt0.14□□□□□ -2.39
VPS9P54787 YGL052WYGL052W 306 nt0.13□□□□□ -2.39
VPS9P54787 YBL100W-BYBL100W-B 5313 nt0.12□□□□□ -2.39
VPS9P54787 YER078W-AYER078W-A 165 nt0.12□□□□□ -2.39
VPS9P54787 YHR175W-AYHR175W-A 150 nt0.12□□□□□ -2.39
VPS9P54787 YMR172C-AYMR172C-A 384 nt0.12□□□□□ -2.39
VPS9P54787 YEL073CYEL073C 324 nt0.11□□□□□ -2.39
VPS9P54787 YKU70YMR284W 1809 nt0.1□□□□□ -2.39
VPS9P54787 HMRA1YCR097W 381 nt0.1□□□□□ -2.39
VPS9P54787 YOR186C-AYOR186C-A 210 nt0.1□□□□□ -2.39
VPS9P54787 YBR072C-AYBR072C-A 162 nt0.1□□□□□ -2.39
VPS9P54787 THO2YNL139C 4794 nt0.1□□□□□ -2.39
VPS9P54787 snR56snR56 88 nt0.07□□□□□ -2.4
VPS9P54787 YCR038W-AYCR038W-A 126 nt0.07□□□□□ -2.4
VPS9P54787 YIL002W-AYIL002W-A 210 nt0.07□□□□□ -2.4
VPS9P54787 tR(ACG)Q2tR(ACG)Q2 74 nt0.04□□□□□ -2.4
VPS9P54787 YOR008C-AYOR008C-A 225 nt0.03□□□□□ -2.4
VPS9P54787 YNL277W-AYNL277W-A 189 nt0.02□□□□□ -2.41
VPS9P54787 SOV1YMR066W 2697 nt0.01□□□□□ -2.41
VPS9P54787 YLR232WYLR232W 348 nt0□□□□□ -2.41
VPS9P54787 YMR158W-BYMR158W-B 321 nt0□□□□□ -2.41
VPS9P54787 UTP8YGR128C 2142 nt-0.03□□□□□ -2.41
VPS9P54787 APQ12YIL040W 417 nt-0.03□□□□□ -2.41
VPS9P54787 YIR030W-AYIR030W-A 384 nt-0.03□□□□□ -2.41
VPS9P54787 SDH6YDR379C-A 240 nt-0.04□□□□□ -2.42
VPS9P54787 GLG1YKR058W 1851 nt-0.05□□□□□ -2.42
VPS9P54787 YPR010C-AYPR010C-A 219 nt-0.07□□□□□ -2.42
VPS9P54787 snR45snR45 172 nt-0.07□□□□□ -2.42
VPS9P54787 CSE1YGL238W 2883 nt-0.07□□□□□ -2.42
VPS9P54787 TAH1YCR060W 336 nt-0.09□□□□□ -2.42
VPS9P54787 YDR544CYDR544C 429 nt-0.09□□□□□ -2.42
VPS9P54787 YBR099CYBR099C 384 nt-0.09□□□□□ -2.42
VPS9P54787 YBR182C-AYBR182C-A 195 nt-0.09□□□□□ -2.42
VPS9P54787 tF(GAA)QtF(GAA)Q 75 nt-0.12□□□□□ -2.43
VPS9P54787 PRP39YML046W 1890 nt-0.14□□□□□ -2.43
VPS9P54787 YGL041CYGL041C 204 nt-0.16□□□□□ -2.44
VPS9P54787 COG6YNL041C 2520 nt-0.17□□□□□ -2.44
VPS9P54787 YBL039C-AYBL039C-A 84 nt-0.17□□□□□ -2.44
VPS9P54787 snR65snR65 100 nt-0.18□□□□□ -2.44
VPS9P54787 EST1YLR233C 2100 nt-0.19□□□□□ -2.44
VPS9P54787 snR128snR128 126 nt-0.19□□□□□ -2.44
VPS9P54787 snR8snR8 190 nt-0.22□□□□□ -2.44
VPS9P54787 YDR524W-CYDR524W-C 90 nt-0.22□□□□□ -2.44
VPS9P54787 YER181CYER181C 324 nt-0.22□□□□□ -2.44
VPS9P54787 snR49snR49 165 nt-0.22□□□□□ -2.44
VPS9P54787 snR55snR55 98 nt-0.23□□□□□ -2.45
VPS9P54787 YBR131C-AYBR131C-A 90 nt-0.23□□□□□ -2.45
VPS9P54787 YGL182CYGL182C 324 nt-0.26□□□□□ -2.45
VPS9P54787 YPL152W-AYPL152W-A 99 nt-0.26□□□□□ -2.45
VPS9P54787 YML099W-AYML099W-A 330 nt-0.27□□□□□ -2.45
VPS9P54787 YOR314W-AYOR314W-A 111 nt-0.28□□□□□ -2.45
VPS9P54787 YDR210WYDR210W 228 nt-0.29□□□□□ -2.46
VPS9P54787 YEL014CYEL014C 306 nt-0.29□□□□□ -2.46
VPS9P54787 YJL182CYJL182C 318 nt-0.32□□□□□ -2.46
VPS9P54787 YNL097C-BYNL097C-B 123 nt-0.34□□□□□ -2.46
VPS9P54787 YOL155W-AYOL155W-A 135 nt-0.34□□□□□ -2.46
VPS9P54787 TFB5YDR079C-A 219 nt-0.36□□□□□ -2.47
VPS9P54787 YOR231C-AYOR231C-A 201 nt-0.38□□□□□ -2.47
VPS9P54787 YOR302WYOR302W 78 nt-0.39□□□□□ -2.47
VPS9P54787 YOR381W-AYOR381W-A 168 nt-0.41□□□□□ -2.48
VPS9P54787 RPM2YML091C 3609 nt-0.42□□□□□ -2.48
VPS9P54787 YGR164WYGR164W 336 nt-0.42□□□□□ -2.48
VPS9P54787 YPL060C-AYPL060C-A 3315 nt-0.42□□□□□ -2.48
VPS9P54787 YOR170WYOR170W 306 nt-0.45□□□□□ -2.48
VPS9P54787 SBH2YER019C-A 267 nt-0.46□□□□□ -2.48
VPS9P54787 YGL188C-AYGL188C-A 141 nt-0.48□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms