Protein–RNA interactions for Protein: P53969

SAM50, Sorting assembly machinery 50 kDa subunit, yeastyeast

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SAM50P53969 SIP4YJL089W 2490 nt0.99□□□□□ -2.25
SAM50P53969 KAP120YPL125W 3099 nt0.99□□□□□ -2.25
SAM50P53969 YGR130CYGR130C 2451 nt0.98□□□□□ -2.25
SAM50P53969 TRS65YGR166W 1683 nt0.98□□□□□ -2.25
SAM50P53969 BFR2YDR299W 1605 nt0.98□□□□□ -2.25
SAM50P53969 ROM2YLR371W 4071 nt0.98□□□□□ -2.25
SAM50P53969 YML002WYML002W 2214 nt0.97□□□□□ -2.25
SAM50P53969 PRP42YDR235W 1635 nt0.96□□□□□ -2.26
SAM50P53969 YNL338WYNL338W 159 nt0.95□□□□□ -2.26
SAM50P53969 PRP5YBR237W 2550 nt0.95□□□□□ -2.26
SAM50P53969 FYV10YIL097W 1551 nt0.94□□□□□ -2.26
SAM50P53969 UTP8YGR128C 2142 nt0.94□□□□□ -2.26
SAM50P53969 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
SAM50P53969 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
SAM50P53969 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
SAM50P53969 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
SAM50P53969 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
SAM50P53969 SEC8YPR055W 3198 nt0.93□□□□□ -2.26
SAM50P53969 YLR041WYLR041W 321 nt0.92□□□□□ -2.26
SAM50P53969 YLR294CYLR294C 330 nt0.92□□□□□ -2.26
SAM50P53969 YOR381W-AYOR381W-A 168 nt0.92□□□□□ -2.26
SAM50P53969 YPR160W-AYPR160W-A 81 nt0.91□□□□□ -2.26
SAM50P53969 RKR1YMR247C 4689 nt0.9□□□□□ -2.26
SAM50P53969 YLR399W-AYLR399W-A 105 nt0.9□□□□□ -2.27
SAM50P53969 DOP1YDR141C 5097 nt0.9□□□□□ -2.27
SAM50P53969 STF2YGR008C 255 nt0.89□□□□□ -2.27
SAM50P53969 PRP16YKR086W 3216 nt0.89□□□□□ -2.27
SAM50P53969 UBP3YER151C 2739 nt0.89□□□□□ -2.27
SAM50P53969 tN(GUU)QtN(GUU)Q 71 nt0.88□□□□□ -2.27
SAM50P53969 TAH1YCR060W 336 nt0.87□□□□□ -2.27
SAM50P53969 YGL182CYGL182C 324 nt0.87□□□□□ -2.27
SAM50P53969 YBL039C-AYBL039C-A 84 nt0.86□□□□□ -2.27
SAM50P53969 HUG1YML058W-A 207 nt0.85□□□□□ -2.27
SAM50P53969 YHR131W-AYHR131W-A 246 nt0.84□□□□□ -2.27
SAM50P53969 YBL053WYBL053W 375 nt0.84□□□□□ -2.27
SAM50P53969 YHL015W-AYHL015W-A 84 nt0.83□□□□□ -2.28
SAM50P53969 YLR232WYLR232W 348 nt0.83□□□□□ -2.28
SAM50P53969 YDL073WYDL073W 2955 nt0.83□□□□□ -2.28
SAM50P53969 BEM2YER155C 6504 nt0.82□□□□□ -2.28
SAM50P53969 SNU13YEL026W 381 nt0.82□□□□□ -2.28
SAM50P53969 CHS6YJL099W 2241 nt0.82□□□□□ -2.28
SAM50P53969 YOR170WYOR170W 306 nt0.81□□□□□ -2.28
SAM50P53969 OST4YDL232W 111 nt0.8□□□□□ -2.28
SAM50P53969 YDR544CYDR544C 429 nt0.8□□□□□ -2.28
SAM50P53969 YPR117WYPR117W 7470 nt0.8□□□□□ -2.28
SAM50P53969 YOR102WYOR102W 351 nt0.79□□□□□ -2.28
SAM50P53969 snR48snR48 113 nt0.78□□□□□ -2.28
SAM50P53969 BEM3YPL115C 3387 nt0.77□□□□□ -2.29
SAM50P53969 PAU24YBR301W 363 nt0.77□□□□□ -2.29
SAM50P53969 YSP1YHR155W 3687 nt0.75□□□□□ -2.29
SAM50P53969 YDL007C-AYDL007C-A 258 nt0.75□□□□□ -2.29
SAM50P53969 tL(UAA)QtL(UAA)Q 85 nt0.75□□□□□ -2.29
SAM50P53969 YOR329W-AYOR329W-A 210 nt0.73□□□□□ -2.29
SAM50P53969 YJL127W-AYJL127W-A 117 nt0.72□□□□□ -2.29
SAM50P53969 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
SAM50P53969 SEC1YDR164C 2175 nt0.71□□□□□ -2.3
SAM50P53969 COG6YNL041C 2520 nt0.71□□□□□ -2.3
SAM50P53969 YBR072C-AYBR072C-A 162 nt0.7□□□□□ -2.3
SAM50P53969 UTP20YBL004W 7482 nt0.7□□□□□ -2.3
SAM50P53969 YOR314W-AYOR314W-A 111 nt0.69□□□□□ -2.3
SAM50P53969 YOR192C-BYOR192C-B 5313 nt0.69□□□□□ -2.3
SAM50P53969 SDH6YDR379C-A 240 nt0.68□□□□□ -2.3
SAM50P53969 tM(CAU)Q2tM(CAU)Q2 78 nt0.68□□□□□ -2.3
SAM50P53969 snR39BsnR39B 96 nt0.68□□□□□ -2.3
SAM50P53969 NNF2YGR089W 2811 nt0.68□□□□□ -2.3
SAM50P53969 QCR9YGR183C 201 nt0.67□□□□□ -2.3
SAM50P53969 YLL006W-AYLL006W-A 177 nt0.67□□□□□ -2.3
SAM50P53969 LTE1YAL024C 4308 nt0.64□□□□□ -2.31
SAM50P53969 YDR210WYDR210W 228 nt0.64□□□□□ -2.31
SAM50P53969 GLG1YKR058W 1851 nt0.64□□□□□ -2.31
SAM50P53969 YGR164WYGR164W 336 nt0.63□□□□□ -2.31
SAM50P53969 YNL067W-BYNL067W-B 141 nt0.63□□□□□ -2.31
SAM50P53969 PET111YMR257C 2403 nt0.63□□□□□ -2.31
SAM50P53969 YIL142C-AYIL142C-A 333 nt0.62□□□□□ -2.31
SAM50P53969 ULP2YIL031W 3105 nt0.62□□□□□ -2.31
SAM50P53969 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
SAM50P53969 NIP1YMR309C 2439 nt0.6□□□□□ -2.31
SAM50P53969 tF(GAA)BtF(GAA)B 73 nt0.59□□□□□ -2.31
SAM50P53969 tF(GAA)FtF(GAA)F 73 nt0.59□□□□□ -2.31
SAM50P53969 tF(GAA)GtF(GAA)G 73 nt0.59□□□□□ -2.31
SAM50P53969 tF(GAA)H1tF(GAA)H1 73 nt0.59□□□□□ -2.31
SAM50P53969 tF(GAA)H2tF(GAA)H2 73 nt0.59□□□□□ -2.31
SAM50P53969 tF(GAA)MtF(GAA)M 73 nt0.59□□□□□ -2.31
SAM50P53969 tF(GAA)P1tF(GAA)P1 73 nt0.59□□□□□ -2.31
SAM50P53969 tF(GAA)P2tF(GAA)P2 73 nt0.59□□□□□ -2.31
SAM50P53969 PAU12YGR294W 363 nt0.59□□□□□ -2.31
SAM50P53969 RPS26AYGL189C 360 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)BtT(AGU)B 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)CtT(AGU)C 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)DtT(AGU)D 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)HtT(AGU)H 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)I1tT(AGU)I1 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)I2tT(AGU)I2 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)JtT(AGU)J 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)N1tT(AGU)N1 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)N2tT(AGU)N2 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)O1tT(AGU)O1 73 nt0.58□□□□□ -2.32
SAM50P53969 tT(AGU)O2tT(AGU)O2 73 nt0.58□□□□□ -2.32
SAM50P53969 BUL2YML111W 2763 nt0.57□□□□□ -2.32
SAM50P53969 YDR371C-AYDR371C-A 105 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 9.4 ms