Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 YDL073WYDL073W 2955 nt0.87□□□□□ -2.27
CAF40P53829 IML1YJR138W 4755 nt0.87□□□□□ -2.27
CAF40P53829 PRP16YKR086W 3216 nt0.87□□□□□ -2.27
CAF40P53829 SIP4YJL089W 2490 nt0.87□□□□□ -2.27
CAF40P53829 YML002WYML002W 2214 nt0.86□□□□□ -2.27
CAF40P53829 FYV10YIL097W 1551 nt0.85□□□□□ -2.27
CAF40P53829 YLR041WYLR041W 321 nt0.85□□□□□ -2.27
CAF40P53829 PRP39YML046W 1890 nt0.85□□□□□ -2.27
CAF40P53829 tN(GUU)QtN(GUU)Q 71 nt0.84□□□□□ -2.27
CAF40P53829 ANS1YHR126C 480 nt0.84□□□□□ -2.27
CAF40P53829 YLR466C-BYLR466C-B 117 nt0.84□□□□□ -2.27
CAF40P53829 YPR160W-AYPR160W-A 81 nt0.84□□□□□ -2.27
CAF40P53829 SEC8YPR055W 3198 nt0.84□□□□□ -2.28
CAF40P53829 PRP42YDR235W 1635 nt0.83□□□□□ -2.28
CAF40P53829 YKL100W-AYKL100W-A 90 nt0.83□□□□□ -2.28
CAF40P53829 YGR130CYGR130C 2451 nt0.82□□□□□ -2.28
CAF40P53829 PRP5YBR237W 2550 nt0.82□□□□□ -2.28
CAF40P53829 YEL073CYEL073C 324 nt0.8□□□□□ -2.28
CAF40P53829 YLR342W-AYLR342W-A 174 nt0.8□□□□□ -2.28
CAF40P53829 MYO1YHR023W 5787 nt0.8□□□□□ -2.28
CAF40P53829 CHS6YJL099W 2241 nt0.79□□□□□ -2.28
CAF40P53829 YLR399W-AYLR399W-A 105 nt0.79□□□□□ -2.28
CAF40P53829 YOR225WYOR225W 330 nt0.79□□□□□ -2.28
CAF40P53829 YGL007C-AYGL007C-A 87 nt0.78□□□□□ -2.28
CAF40P53829 YGR151CYGR151C 336 nt0.78□□□□□ -2.28
CAF40P53829 UTP8YGR128C 2142 nt0.77□□□□□ -2.29
CAF40P53829 TRS65YGR166W 1683 nt0.76□□□□□ -2.29
CAF40P53829 TAH1YCR060W 336 nt0.76□□□□□ -2.29
CAF40P53829 YBL039C-AYBL039C-A 84 nt0.76□□□□□ -2.29
CAF40P53829 OST4YDL232W 111 nt0.75□□□□□ -2.29
CAF40P53829 YGL182CYGL182C 324 nt0.74□□□□□ -2.29
CAF40P53829 YHR131W-AYHR131W-A 246 nt0.74□□□□□ -2.29
CAF40P53829 YNL338WYNL338W 159 nt0.74□□□□□ -2.29
CAF40P53829 PAU24YBR301W 363 nt0.74□□□□□ -2.29
CAF40P53829 Q0032Q0032 291 nt0.73□□□□□ -2.29
CAF40P53829 YOR381W-AYOR381W-A 168 nt0.73□□□□□ -2.29
CAF40P53829 SNU13YEL026W 381 nt0.72□□□□□ -2.29
CAF40P53829 YLR232WYLR232W 348 nt0.71□□□□□ -2.3
CAF40P53829 YBL053WYBL053W 375 nt0.71□□□□□ -2.3
CAF40P53829 UBP3YER151C 2739 nt0.7□□□□□ -2.3
CAF40P53829 YDR544CYDR544C 429 nt0.7□□□□□ -2.3
CAF40P53829 YJL127W-AYJL127W-A 117 nt0.68□□□□□ -2.3
CAF40P53829 LTE1YAL024C 4308 nt0.68□□□□□ -2.3
CAF40P53829 SEC1YDR164C 2175 nt0.67□□□□□ -2.3
CAF40P53829 YOR192C-BYOR192C-B 5313 nt0.67□□□□□ -2.3
CAF40P53829 YOR170WYOR170W 306 nt0.65□□□□□ -2.31
CAF40P53829 YSP1YHR155W 3687 nt0.65□□□□□ -2.31
CAF40P53829 YLR294CYLR294C 330 nt0.64□□□□□ -2.31
CAF40P53829 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
CAF40P53829 snR48snR48 113 nt0.64□□□□□ -2.31
CAF40P53829 BEM3YPL115C 3387 nt0.63□□□□□ -2.31
CAF40P53829 tL(UAA)QtL(UAA)Q 85 nt0.62□□□□□ -2.31
CAF40P53829 SDH6YDR379C-A 240 nt0.61□□□□□ -2.31
CAF40P53829 YHL015W-AYHL015W-A 84 nt0.61□□□□□ -2.31
CAF40P53829 YOR102WYOR102W 351 nt0.61□□□□□ -2.31
CAF40P53829 YOR329W-AYOR329W-A 210 nt0.61□□□□□ -2.31
CAF40P53829 NNF2YGR089W 2811 nt0.61□□□□□ -2.31
CAF40P53829 COG6YNL041C 2520 nt0.61□□□□□ -2.31
CAF40P53829 YOR314W-AYOR314W-A 111 nt0.6□□□□□ -2.31
CAF40P53829 YBR072C-AYBR072C-A 162 nt0.6□□□□□ -2.31
CAF40P53829 PAU12YGR294W 363 nt0.59□□□□□ -2.31
CAF40P53829 YLL006W-AYLL006W-A 177 nt0.59□□□□□ -2.31
CAF40P53829 YPR159C-AYPR159C-A 102 nt0.59□□□□□ -2.31
CAF40P53829 snR39BsnR39B 96 nt0.59□□□□□ -2.31
CAF40P53829 BUL2YML111W 2763 nt0.57□□□□□ -2.32
CAF40P53829 PET111YMR257C 2403 nt0.57□□□□□ -2.32
CAF40P53829 YDL007C-AYDL007C-A 258 nt0.56□□□□□ -2.32
CAF40P53829 NIP1YMR309C 2439 nt0.55□□□□□ -2.32
CAF40P53829 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
CAF40P53829 YDR371C-AYDR371C-A 105 nt0.55□□□□□ -2.32
CAF40P53829 RPS26AYGL189C 360 nt0.55□□□□□ -2.32
CAF40P53829 ULP2YIL031W 3105 nt0.54□□□□□ -2.32
CAF40P53829 YDR210WYDR210W 228 nt0.54□□□□□ -2.32
CAF40P53829 QCR9YGR183C 201 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)BtT(AGU)B 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)CtT(AGU)C 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)DtT(AGU)D 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)HtT(AGU)H 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)I1tT(AGU)I1 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)I2tT(AGU)I2 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)JtT(AGU)J 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)N1tT(AGU)N1 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)N2tT(AGU)N2 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)O1tT(AGU)O1 73 nt0.54□□□□□ -2.32
CAF40P53829 tT(AGU)O2tT(AGU)O2 73 nt0.54□□□□□ -2.32
CAF40P53829 GLG1YKR058W 1851 nt0.53□□□□□ -2.32
CAF40P53829 ORC3YLL004W 1851 nt0.53□□□□□ -2.32
CAF40P53829 YIL142C-AYIL142C-A 333 nt0.52□□□□□ -2.33
CAF40P53829 tM(CAU)Q2tM(CAU)Q2 78 nt0.51□□□□□ -2.33
CAF40P53829 SBH1YER087C-B 249 nt0.5□□□□□ -2.33
CAF40P53829 YNL067W-BYNL067W-B 141 nt0.48□□□□□ -2.33
CAF40P53829 CSE1YGL238W 2883 nt0.45□□□□□ -2.34
CAF40P53829 RPM2YML091C 3609 nt0.43□□□□□ -2.34
CAF40P53829 YGR146C-AYGR146C-A 162 nt0.43□□□□□ -2.34
CAF40P53829 STF2YGR008C 255 nt0.42□□□□□ -2.34
CAF40P53829 YPL060C-AYPL060C-A 3315 nt0.42□□□□□ -2.34
CAF40P53829 RCO1YMR075W 2055 nt0.42□□□□□ -2.34
CAF40P53829 YGR164WYGR164W 336 nt0.41□□□□□ -2.34
CAF40P53829 YBL100W-BYBL100W-B 5313 nt0.41□□□□□ -2.34
CAF40P53829 YMR160WYMR160W 2451 nt0.41□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms