Protein–RNA interactions for Protein: P53172

SDS23, Protein SDS23, yeastyeast

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS23P53172 YCR022CYCR022C 345 nt0.39□□□□□ -2.35
SDS23P53172 YNL277W-AYNL277W-A 189 nt0.39□□□□□ -2.35
SDS23P53172 YMR160WYMR160W 2451 nt0.39□□□□□ -2.35
SDS23P53172 YSP1YHR155W 3687 nt0.38□□□□□ -2.35
SDS23P53172 YOR008C-AYOR008C-A 225 nt0.38□□□□□ -2.35
SDS23P53172 YKL100W-AYKL100W-A 90 nt0.36□□□□□ -2.35
SDS23P53172 NNF2YGR089W 2811 nt0.35□□□□□ -2.35
SDS23P53172 YER053C-AYER053C-A 114 nt0.34□□□□□ -2.36
SDS23P53172 COX12YLR038C 252 nt0.34□□□□□ -2.36
SDS23P53172 YCR038W-AYCR038W-A 126 nt0.33□□□□□ -2.36
SDS23P53172 YLR041WYLR041W 321 nt0.33□□□□□ -2.36
SDS23P53172 ESP1YGR098C 4893 nt0.33□□□□□ -2.36
SDS23P53172 BEM3YPL115C 3387 nt0.32□□□□□ -2.36
SDS23P53172 snR65snR65 100 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)BtF(GAA)B 73 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)FtF(GAA)F 73 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)GtF(GAA)G 73 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)H1tF(GAA)H1 73 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)H2tF(GAA)H2 73 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)MtF(GAA)M 73 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)P1tF(GAA)P1 73 nt0.32□□□□□ -2.36
SDS23P53172 tF(GAA)P2tF(GAA)P2 73 nt0.32□□□□□ -2.36
SDS23P53172 Q0142Q0142 177 nt0.32□□□□□ -2.36
SDS23P53172 YHR131W-AYHR131W-A 246 nt0.32□□□□□ -2.36
SDS23P53172 YDR366CYDR366C 399 nt0.31□□□□□ -2.36
SDS23P53172 YDR371C-AYDR371C-A 105 nt0.31□□□□□ -2.36
SDS23P53172 RPS26AYGL189C 360 nt0.31□□□□□ -2.36
SDS23P53172 ORC3YLL004W 1851 nt0.31□□□□□ -2.36
SDS23P53172 UTP20YBL004W 7482 nt0.3□□□□□ -2.36
SDS23P53172 SNU13YEL026W 381 nt0.3□□□□□ -2.36
SDS23P53172 YNL146WYNL146W 303 nt0.3□□□□□ -2.36
SDS23P53172 YKL145W-AYKL145W-A 93 nt0.29□□□□□ -2.36
SDS23P53172 YIR030W-AYIR030W-A 384 nt0.28□□□□□ -2.36
SDS23P53172 YLL006W-AYLL006W-A 177 nt0.28□□□□□ -2.36
SDS23P53172 ABF2YMR072W 552 nt0.28□□□□□ -2.36
SDS23P53172 MLP1YKR095W 5628 nt0.28□□□□□ -2.37
SDS23P53172 YIL002W-AYIL002W-A 210 nt0.27□□□□□ -2.37
SDS23P53172 NIP1YMR309C 2439 nt0.27□□□□□ -2.37
SDS23P53172 tF(GAA)QtF(GAA)Q 75 nt0.26□□□□□ -2.37
SDS23P53172 snR49snR49 165 nt0.26□□□□□ -2.37
SDS23P53172 TRS65YGR166W 1683 nt0.26□□□□□ -2.37
SDS23P53172 ULP2YIL031W 3105 nt0.26□□□□□ -2.37
SDS23P53172 UTP8YGR128C 2142 nt0.25□□□□□ -2.37
SDS23P53172 YKU70YMR284W 1809 nt0.25□□□□□ -2.37
SDS23P53172 snR55snR55 98 nt0.25□□□□□ -2.37
SDS23P53172 YOR231C-AYOR231C-A 201 nt0.25□□□□□ -2.37
SDS23P53172 YBR182C-AYBR182C-A 195 nt0.25□□□□□ -2.37
SDS23P53172 BIR1YJR089W 2865 nt0.24□□□□□ -2.37
SDS23P53172 YGL041CYGL041C 204 nt0.24□□□□□ -2.37
SDS23P53172 APQ12YIL040W 417 nt0.24□□□□□ -2.37
SDS23P53172 YPL152W-AYPL152W-A 99 nt0.24□□□□□ -2.37
SDS23P53172 IQG1YPL242C 4488 nt0.24□□□□□ -2.37
SDS23P53172 QCR9YGR183C 201 nt0.22□□□□□ -2.37
SDS23P53172 YOL014WYOL014W 375 nt0.22□□□□□ -2.37
SDS23P53172 YBR072C-AYBR072C-A 162 nt0.22□□□□□ -2.37
SDS23P53172 YBR131C-AYBR131C-A 90 nt0.22□□□□□ -2.37
SDS23P53172 RCO1YMR075W 2055 nt0.22□□□□□ -2.38
SDS23P53172 AI1Q0050 2505 nt0.2□□□□□ -2.38
SDS23P53172 YLR232WYLR232W 348 nt0.2□□□□□ -2.38
SDS23P53172 YOL155W-AYOL155W-A 135 nt0.2□□□□□ -2.38
SDS23P53172 BUL2YML111W 2763 nt0.19□□□□□ -2.38
SDS23P53172 YDR544CYDR544C 429 nt0.19□□□□□ -2.38
SDS23P53172 YML099W-AYML099W-A 330 nt0.18□□□□□ -2.38
SDS23P53172 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
SDS23P53172 MLP2YIL149C 5040 nt0.18□□□□□ -2.38
SDS23P53172 TAH1YCR060W 336 nt0.17□□□□□ -2.38
SDS23P53172 YEL073CYEL073C 324 nt0.17□□□□□ -2.38
SDS23P53172 YER181CYER181C 324 nt0.17□□□□□ -2.38
SDS23P53172 CSE1YGL238W 2883 nt0.16□□□□□ -2.38
SDS23P53172 SDH6YDR379C-A 240 nt0.16□□□□□ -2.38
SDS23P53172 YOR186C-AYOR186C-A 210 nt0.16□□□□□ -2.38
SDS23P53172 YGL188C-AYGL188C-A 141 nt0.15□□□□□ -2.39
SDS23P53172 YBL100W-BYBL100W-B 5313 nt0.15□□□□□ -2.39
SDS23P53172 YEL014CYEL014C 306 nt0.14□□□□□ -2.39
SDS23P53172 YMR158W-BYMR158W-B 321 nt0.14□□□□□ -2.39
SDS23P53172 YNL054W-BYNL054W-B 5250 nt0.13□□□□□ -2.39
SDS23P53172 YOR302WYOR302W 78 nt0.13□□□□□ -2.39
SDS23P53172 PRP39YML046W 1890 nt0.13□□□□□ -2.39
SDS23P53172 YBL039C-AYBL039C-A 84 nt0.12□□□□□ -2.39
SDS23P53172 GLG1YKR058W 1851 nt0.12□□□□□ -2.39
SDS23P53172 snR80snR80 171 nt0.1□□□□□ -2.39
SDS23P53172 YJL182CYJL182C 318 nt0.1□□□□□ -2.39
SDS23P53172 COG6YNL041C 2520 nt0.08□□□□□ -2.4
SDS23P53172 YNL097C-BYNL097C-B 123 nt0.08□□□□□ -2.4
SDS23P53172 YGL182CYGL182C 324 nt0.07□□□□□ -2.4
SDS23P53172 YER078W-AYER078W-A 165 nt0.05□□□□□ -2.4
SDS23P53172 YBR099CYBR099C 384 nt0.04□□□□□ -2.4
SDS23P53172 SOV1YMR066W 2697 nt0.03□□□□□ -2.4
SDS23P53172 THO2YNL139C 4794 nt0.02□□□□□ -2.41
SDS23P53172 YOR314W-AYOR314W-A 111 nt0.02□□□□□ -2.41
SDS23P53172 YOR381W-AYOR381W-A 168 nt0.02□□□□□ -2.41
SDS23P53172 EST1YLR233C 2100 nt0.01□□□□□ -2.41
SDS23P53172 snR8snR8 190 nt0□□□□□ -2.41
SDS23P53172 snR52snR52 92 nt-0.01□□□□□ -2.41
SDS23P53172 YDR210WYDR210W 228 nt-0.02□□□□□ -2.41
SDS23P53172 snR128snR128 126 nt-0.04□□□□□ -2.42
SDS23P53172 snR45snR45 172 nt-0.05□□□□□ -2.42
SDS23P53172 tM(CAU)Q2tM(CAU)Q2 78 nt-0.07□□□□□ -2.42
SDS23P53172 YOR170WYOR170W 306 nt-0.07□□□□□ -2.42
SDS23P53172 snR46snR46 197 nt-0.08□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 83.4 ms