Protein–RNA interactions for Protein: P53047

RTA1, Protein RTA1, yeastyeast

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTA1P53047 YLR041WYLR041W 321 nt1.39□□□□□ -2.19
RTA1P53047 ASE1YOR058C 2658 nt1.38□□□□□ -2.19
RTA1P53047 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
RTA1P53047 TAH1YCR060W 336 nt1.37□□□□□ -2.19
RTA1P53047 YIL020C-AYIL020C-A 339 nt1.37□□□□□ -2.19
RTA1P53047 PRP16YKR086W 3216 nt1.37□□□□□ -2.19
RTA1P53047 CDC39YCR093W 6327 nt1.37□□□□□ -2.19
RTA1P53047 SDH6YDR379C-A 240 nt1.36□□□□□ -2.19
RTA1P53047 FYV8YGR196C 2454 nt1.36□□□□□ -2.19
RTA1P53047 YLR232WYLR232W 348 nt1.36□□□□□ -2.19
RTA1P53047 YBL039C-AYBL039C-A 84 nt1.35□□□□□ -2.19
RTA1P53047 CHS6YJL099W 2241 nt1.35□□□□□ -2.19
RTA1P53047 RPM2YML091C 3609 nt1.34□□□□□ -2.2
RTA1P53047 RAD9YDR217C 3930 nt1.34□□□□□ -2.2
RTA1P53047 tH(GUG)E1tH(GUG)E1 72 nt1.32□□□□□ -2.2
RTA1P53047 tH(GUG)E2tH(GUG)E2 72 nt1.32□□□□□ -2.2
RTA1P53047 tH(GUG)G1tH(GUG)G1 72 nt1.32□□□□□ -2.2
RTA1P53047 tH(GUG)G2tH(GUG)G2 72 nt1.32□□□□□ -2.2
RTA1P53047 tH(GUG)HtH(GUG)H 72 nt1.32□□□□□ -2.2
RTA1P53047 tH(GUG)KtH(GUG)K 72 nt1.32□□□□□ -2.2
RTA1P53047 tH(GUG)MtH(GUG)M 72 nt1.32□□□□□ -2.2
RTA1P53047 YPR160W-AYPR160W-A 81 nt1.32□□□□□ -2.2
RTA1P53047 BEM3YPL115C 3387 nt1.3□□□□□ -2.2
RTA1P53047 YHR131W-AYHR131W-A 246 nt1.3□□□□□ -2.2
RTA1P53047 YBL053WYBL053W 375 nt1.29□□□□□ -2.2
RTA1P53047 UBP3YER151C 2739 nt1.28□□□□□ -2.2
RTA1P53047 YSP1YHR155W 3687 nt1.27□□□□□ -2.21
RTA1P53047 YNL284C-BYNL284C-B 5268 nt1.27□□□□□ -2.21
RTA1P53047 BUD3YCL014W 4911 nt1.25□□□□□ -2.21
RTA1P53047 tM(CAU)Q2tM(CAU)Q2 78 nt1.25□□□□□ -2.21
RTA1P53047 ANS1YHR126C 480 nt1.25□□□□□ -2.21
RTA1P53047 tL(UAA)QtL(UAA)Q 85 nt1.23□□□□□ -2.21
RTA1P53047 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
RTA1P53047 YOR329W-AYOR329W-A 210 nt1.21□□□□□ -2.22
RTA1P53047 YDL073WYDL073W 2955 nt1.21□□□□□ -2.22
RTA1P53047 QCR9YGR183C 201 nt1.2□□□□□ -2.22
RTA1P53047 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
RTA1P53047 IML1YJR138W 4755 nt1.2□□□□□ -2.22
RTA1P53047 NST1YNL091W 3723 nt1.19□□□□□ -2.22
RTA1P53047 YNL067W-BYNL067W-B 141 nt1.19□□□□□ -2.22
RTA1P53047 tN(GUU)QtN(GUU)Q 71 nt1.18□□□□□ -2.22
RTA1P53047 YGR130CYGR130C 2451 nt1.18□□□□□ -2.22
RTA1P53047 YDR544CYDR544C 429 nt1.17□□□□□ -2.22
RTA1P53047 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
RTA1P53047 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
RTA1P53047 SIP4YJL089W 2490 nt1.16□□□□□ -2.22
RTA1P53047 snR39BsnR39B 96 nt1.15□□□□□ -2.23
RTA1P53047 LTE1YAL024C 4308 nt1.15□□□□□ -2.23
RTA1P53047 COG6YNL041C 2520 nt1.15□□□□□ -2.23
RTA1P53047 YCR095W-AYCR095W-A 159 nt1.14□□□□□ -2.23
RTA1P53047 OST4YDL232W 111 nt1.14□□□□□ -2.23
RTA1P53047 YPR117WYPR117W 7470 nt1.13□□□□□ -2.23
RTA1P53047 ULP2YIL031W 3105 nt1.12□□□□□ -2.23
RTA1P53047 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
RTA1P53047 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
RTA1P53047 GLG1YKR058W 1851 nt1.1□□□□□ -2.23
RTA1P53047 YCL001W-BYCL001W-B 255 nt1.1□□□□□ -2.23
RTA1P53047 YJL127W-AYJL127W-A 117 nt1.09□□□□□ -2.23
RTA1P53047 YBR072C-AYBR072C-A 162 nt1.09□□□□□ -2.23
RTA1P53047 YDR210WYDR210W 228 nt1.08□□□□□ -2.24
RTA1P53047 SOM1YEL059C-A 225 nt1.07□□□□□ -2.24
RTA1P53047 YGR146C-AYGR146C-A 162 nt1.06□□□□□ -2.24
RTA1P53047 VAM6YDL077C 3150 nt1.05□□□□□ -2.24
RTA1P53047 BEM2YER155C 6504 nt1.05□□□□□ -2.24
RTA1P53047 YLL006W-AYLL006W-A 177 nt1.03□□□□□ -2.24
RTA1P53047 NNF2YGR089W 2811 nt1.02□□□□□ -2.25
RTA1P53047 YBR099CYBR099C 384 nt0.99□□□□□ -2.25
RTA1P53047 SEC1YDR164C 2175 nt0.98□□□□□ -2.25
RTA1P53047 YNL205CYNL205C 423 nt0.98□□□□□ -2.25
RTA1P53047 RKR1YMR247C 4689 nt0.98□□□□□ -2.25
RTA1P53047 STF2YGR008C 255 nt0.96□□□□□ -2.26
RTA1P53047 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
RTA1P53047 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
RTA1P53047 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
RTA1P53047 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
RTA1P53047 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
RTA1P53047 MLP1YKR095W 5628 nt0.94□□□□□ -2.26
RTA1P53047 Q0143Q0143 153 nt0.93□□□□□ -2.26
RTA1P53047 PET111YMR257C 2403 nt0.93□□□□□ -2.26
RTA1P53047 CSE1YGL238W 2883 nt0.92□□□□□ -2.26
RTA1P53047 PAU24YBR301W 363 nt0.91□□□□□ -2.26
RTA1P53047 HUG1YML058W-A 207 nt0.89□□□□□ -2.27
RTA1P53047 NIP1YMR309C 2439 nt0.88□□□□□ -2.27
RTA1P53047 DOP1YDR141C 5097 nt0.88□□□□□ -2.27
RTA1P53047 BIR1YJR089W 2865 nt0.87□□□□□ -2.27
RTA1P53047 YIL071W-AYIL071W-A 477 nt0.87□□□□□ -2.27
RTA1P53047 YOR192C-BYOR192C-B 5313 nt0.83□□□□□ -2.28
RTA1P53047 snR85snR85 171 nt0.83□□□□□ -2.28
RTA1P53047 YPR159C-AYPR159C-A 102 nt0.83□□□□□ -2.28
RTA1P53047 BUL2YML111W 2763 nt0.82□□□□□ -2.28
RTA1P53047 YNL266WYNL266W 420 nt0.82□□□□□ -2.28
RTA1P53047 RPS26AYGL189C 360 nt0.81□□□□□ -2.28
RTA1P53047 IQG1YPL242C 4488 nt0.81□□□□□ -2.28
RTA1P53047 PAU12YGR294W 363 nt0.8□□□□□ -2.28
RTA1P53047 YDR371C-AYDR371C-A 105 nt0.79□□□□□ -2.28
RTA1P53047 PMP2YEL017C-A 132 nt0.78□□□□□ -2.28
RTA1P53047 YJL077W-AYJL077W-A 87 nt0.77□□□□□ -2.29
RTA1P53047 RCO1YMR075W 2055 nt0.75□□□□□ -2.29
RTA1P53047 YIL142C-AYIL142C-A 333 nt0.74□□□□□ -2.29
RTA1P53047 SEC10YLR166C 2616 nt0.73□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms