Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YIL134C-AYIL134C-A 204 nt1□□□□□ -2.25
VPS4P52917 COX12YLR038C 252 nt1□□□□□ -2.25
VPS4P52917 BLI1YKL061W 342 nt0.99□□□□□ -2.25
VPS4P52917 YOR161W-AYOR161W-A 81 nt0.99□□□□□ -2.25
VPS4P52917 SEC8YPR055W 3198 nt0.98□□□□□ -2.25
VPS4P52917 RKR1YMR247C 4689 nt0.97□□□□□ -2.25
VPS4P52917 YCR038W-AYCR038W-A 126 nt0.97□□□□□ -2.25
VPS4P52917 SPG3YDR504C 384 nt0.97□□□□□ -2.25
VPS4P52917 COX5BYIL111W 456 nt0.97□□□□□ -2.25
VPS4P52917 YKL100W-AYKL100W-A 90 nt0.96□□□□□ -2.26
VPS4P52917 PRP16YKR086W 3216 nt0.96□□□□□ -2.26
VPS4P52917 YNL097C-BYNL097C-B 123 nt0.95□□□□□ -2.26
VPS4P52917 YML002WYML002W 2214 nt0.95□□□□□ -2.26
VPS4P52917 YER053C-AYER053C-A 114 nt0.94□□□□□ -2.26
VPS4P52917 APQ12YIL040W 417 nt0.94□□□□□ -2.26
VPS4P52917 YPR160W-AYPR160W-A 81 nt0.94□□□□□ -2.26
VPS4P52917 YDL073WYDL073W 2955 nt0.93□□□□□ -2.26
VPS4P52917 YIL002W-AYIL002W-A 210 nt0.93□□□□□ -2.26
VPS4P52917 YLR399W-AYLR399W-A 105 nt0.93□□□□□ -2.26
VPS4P52917 JLP2YMR132C 627 nt0.92□□□□□ -2.26
VPS4P52917 HAL9YOL089C 3093 nt0.92□□□□□ -2.26
VPS4P52917 YMR046W-AYMR046W-A 129 nt0.9□□□□□ -2.27
VPS4P52917 FYV10YIL097W 1551 nt0.9□□□□□ -2.27
VPS4P52917 CHS6YJL099W 2241 nt0.89□□□□□ -2.27
VPS4P52917 UTP8YGR128C 2142 nt0.88□□□□□ -2.27
VPS4P52917 YEL014CYEL014C 306 nt0.88□□□□□ -2.27
VPS4P52917 PRP5YBR237W 2550 nt0.88□□□□□ -2.27
VPS4P52917 TRS65YGR166W 1683 nt0.88□□□□□ -2.27
VPS4P52917 YDR406W-AYDR406W-A 246 nt0.86□□□□□ -2.27
VPS4P52917 tM(CAU)Q1tM(CAU)Q1 76 nt0.86□□□□□ -2.27
VPS4P52917 tN(GUU)QtN(GUU)Q 71 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)BtT(AGU)B 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)CtT(AGU)C 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)DtT(AGU)D 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)HtT(AGU)H 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)I1tT(AGU)I1 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)I2tT(AGU)I2 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)JtT(AGU)J 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)N1tT(AGU)N1 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)N2tT(AGU)N2 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)O1tT(AGU)O1 73 nt0.86□□□□□ -2.27
VPS4P52917 tT(AGU)O2tT(AGU)O2 73 nt0.86□□□□□ -2.27
VPS4P52917 YLR041WYLR041W 321 nt0.86□□□□□ -2.27
VPS4P52917 SEC1YDR164C 2175 nt0.83□□□□□ -2.28
VPS4P52917 PRP42YDR235W 1635 nt0.82□□□□□ -2.28
VPS4P52917 OST4YDL232W 111 nt0.82□□□□□ -2.28
VPS4P52917 YJL182CYJL182C 318 nt0.82□□□□□ -2.28
VPS4P52917 snR46snR46 197 nt0.8□□□□□ -2.28
VPS4P52917 snR52snR52 92 nt0.8□□□□□ -2.28
VPS4P52917 YHR131W-AYHR131W-A 246 nt0.79□□□□□ -2.28
VPS4P52917 PRP39YML046W 1890 nt0.78□□□□□ -2.28
VPS4P52917 BIR1YJR089W 2865 nt0.77□□□□□ -2.29
VPS4P52917 YJL127W-AYJL127W-A 117 nt0.77□□□□□ -2.29
VPS4P52917 SNU13YEL026W 381 nt0.76□□□□□ -2.29
VPS4P52917 TAH1YCR060W 336 nt0.75□□□□□ -2.29
VPS4P52917 YSP1YHR155W 3687 nt0.74□□□□□ -2.29
VPS4P52917 BEM3YPL115C 3387 nt0.74□□□□□ -2.29
VPS4P52917 YLR232WYLR232W 348 nt0.74□□□□□ -2.29
VPS4P52917 YLR342W-AYLR342W-A 174 nt0.74□□□□□ -2.29
VPS4P52917 YMR272W-AYMR272W-A 114 nt0.74□□□□□ -2.29
VPS4P52917 YEL073CYEL073C 324 nt0.73□□□□□ -2.29
VPS4P52917 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
VPS4P52917 ULP2YIL031W 3105 nt0.72□□□□□ -2.29
VPS4P52917 LTE1YAL024C 4308 nt0.72□□□□□ -2.29
VPS4P52917 FMP27YLR454W 7887 nt0.7□□□□□ -2.3
VPS4P52917 YGL182CYGL182C 324 nt0.7□□□□□ -2.3
VPS4P52917 YBL039C-AYBL039C-A 84 nt0.7□□□□□ -2.3
VPS4P52917 YOR192C-BYOR192C-B 5313 nt0.7□□□□□ -2.3
VPS4P52917 YJL150WYJL150W 303 nt0.69□□□□□ -2.3
VPS4P52917 NNF2YGR089W 2811 nt0.68□□□□□ -2.3
VPS4P52917 PET111YMR257C 2403 nt0.68□□□□□ -2.3
VPS4P52917 AI1Q0050 2505 nt0.67□□□□□ -2.3
VPS4P52917 YDR544CYDR544C 429 nt0.66□□□□□ -2.3
VPS4P52917 YOR381W-AYOR381W-A 168 nt0.65□□□□□ -2.31
VPS4P52917 YLL006W-AYLL006W-A 177 nt0.64□□□□□ -2.31
VPS4P52917 YBR072C-AYBR072C-A 162 nt0.64□□□□□ -2.31
VPS4P52917 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
VPS4P52917 BUL2YML111W 2763 nt0.63□□□□□ -2.31
VPS4P52917 YNL337WYNL337W 255 nt0.6□□□□□ -2.31
VPS4P52917 YOR170WYOR170W 306 nt0.59□□□□□ -2.31
VPS4P52917 NIP1YMR309C 2439 nt0.58□□□□□ -2.32
VPS4P52917 COG6YNL041C 2520 nt0.58□□□□□ -2.32
VPS4P52917 YDR371C-AYDR371C-A 105 nt0.58□□□□□ -2.32
VPS4P52917 SDH6YDR379C-A 240 nt0.58□□□□□ -2.32
VPS4P52917 RPS26AYGL189C 360 nt0.58□□□□□ -2.32
VPS4P52917 YER078W-AYER078W-A 165 nt0.57□□□□□ -2.32
VPS4P52917 SBH1YER087C-B 249 nt0.57□□□□□ -2.32
VPS4P52917 YLR466C-BYLR466C-B 117 nt0.57□□□□□ -2.32
VPS4P52917 YNL198CYNL198C 303 nt0.57□□□□□ -2.32
VPS4P52917 GLG1YKR058W 1851 nt0.56□□□□□ -2.32
VPS4P52917 YGR151CYGR151C 336 nt0.54□□□□□ -2.32
VPS4P52917 YOR314W-AYOR314W-A 111 nt0.54□□□□□ -2.32
VPS4P52917 ORC3YLL004W 1851 nt0.54□□□□□ -2.32
VPS4P52917 MLP1YKR095W 5628 nt0.53□□□□□ -2.32
VPS4P52917 IQG1YPL242C 4488 nt0.51□□□□□ -2.33
VPS4P52917 YHL015W-AYHL015W-A 84 nt0.51□□□□□ -2.33
VPS4P52917 snR48snR48 113 nt0.5□□□□□ -2.33
VPS4P52917 tM(CAU)Q2tM(CAU)Q2 78 nt0.49□□□□□ -2.33
VPS4P52917 YOR329W-AYOR329W-A 210 nt0.49□□□□□ -2.33
VPS4P52917 CSE1YGL238W 2883 nt0.48□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 52.1 ms