Protein–RNA interactions for Protein: P52492

UBC11, Ubiquitin-conjugating enzyme E2-18 kDa, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBC11P52492 AZF1YOR113W 2745 nt1.4□□□□□ -2.19
UBC11P52492 DNF3YMR162C 4971 nt1.39□□□□□ -2.19
UBC11P52492 STF2YGR008C 255 nt1.39□□□□□ -2.19
UBC11P52492 NUP145YGL092W 3954 nt1.39□□□□□ -2.19
UBC11P52492 CHS1YNL192W 3396 nt1.38□□□□□ -2.19
UBC11P52492 RAD9YDR217C 3930 nt1.36□□□□□ -2.19
UBC11P52492 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
UBC11P52492 EST2YLR318W 2655 nt1.35□□□□□ -2.19
UBC11P52492 YGL041C-BYGL041C-B 183 nt1.35□□□□□ -2.19
UBC11P52492 YOL019W-AYOL019W-A 153 nt1.35□□□□□ -2.19
UBC11P52492 SEC3YER008C 4011 nt1.35□□□□□ -2.19
UBC11P52492 SXM1YDR395W 2835 nt1.34□□□□□ -2.19
UBC11P52492 PIK1YNL267W 3201 nt1.34□□□□□ -2.19
UBC11P52492 YDR210WYDR210W 228 nt1.34□□□□□ -2.19
UBC11P52492 YJL127W-AYJL127W-A 117 nt1.34□□□□□ -2.19
UBC11P52492 CDC39YCR093W 6327 nt1.34□□□□□ -2.2
UBC11P52492 FIG2YCR089W 4830 nt1.33□□□□□ -2.2
UBC11P52492 SPC110YDR356W 2835 nt1.32□□□□□ -2.2
UBC11P52492 tC(GCA)BtC(GCA)B 72 nt1.32□□□□□ -2.2
UBC11P52492 tC(GCA)GtC(GCA)G 72 nt1.32□□□□□ -2.2
UBC11P52492 tC(GCA)P1tC(GCA)P1 72 nt1.32□□□□□ -2.2
UBC11P52492 tC(GCA)P2tC(GCA)P2 72 nt1.32□□□□□ -2.2
UBC11P52492 SBH1YER087C-B 249 nt1.32□□□□□ -2.2
UBC11P52492 FAB1YFR019W 6837 nt1.32□□□□□ -2.2
UBC11P52492 PRP16YKR086W 3216 nt1.31□□□□□ -2.2
UBC11P52492 KAP120YPL125W 3099 nt1.31□□□□□ -2.2
UBC11P52492 YNL284C-BYNL284C-B 5268 nt1.31□□□□□ -2.2
UBC11P52492 YDL247W-AYDL247W-A 75 nt1.31□□□□□ -2.2
UBC11P52492 SEC8YPR055W 3198 nt1.31□□□□□ -2.2
UBC11P52492 RCO1YMR075W 2055 nt1.31□□□□□ -2.2
UBC11P52492 COG6YNL041C 2520 nt1.31□□□□□ -2.2
UBC11P52492 BEM3YPL115C 3387 nt1.28□□□□□ -2.2
UBC11P52492 CDC25YLR310C 4770 nt1.27□□□□□ -2.21
UBC11P52492 tN(GUU)QtN(GUU)Q 71 nt1.27□□□□□ -2.21
UBC11P52492 YGR146C-AYGR146C-A 162 nt1.27□□□□□ -2.21
UBC11P52492 IRA1YBR140C 9279 nt1.26□□□□□ -2.21
UBC11P52492 SEC1YDR164C 2175 nt1.26□□□□□ -2.21
UBC11P52492 YLR399W-AYLR399W-A 105 nt1.26□□□□□ -2.21
UBC11P52492 YDL073WYDL073W 2955 nt1.26□□□□□ -2.21
UBC11P52492 FYV8YGR196C 2454 nt1.25□□□□□ -2.21
UBC11P52492 ROM2YLR371W 4071 nt1.25□□□□□ -2.21
UBC11P52492 BIR1YJR089W 2865 nt1.25□□□□□ -2.21
UBC11P52492 YPR160W-AYPR160W-A 81 nt1.25□□□□□ -2.21
UBC11P52492 PET127YOR017W 2403 nt1.25□□□□□ -2.21
UBC11P52492 YNL266WYNL266W 420 nt1.23□□□□□ -2.21
UBC11P52492 MEC1YBR136W 7107 nt1.23□□□□□ -2.21
UBC11P52492 HKR1YDR420W 5409 nt1.23□□□□□ -2.21
UBC11P52492 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
UBC11P52492 YMR272W-BYMR272W-B 108 nt1.21□□□□□ -2.22
UBC11P52492 REV3YPL167C 4515 nt1.2□□□□□ -2.22
UBC11P52492 UBP3YER151C 2739 nt1.19□□□□□ -2.22
UBC11P52492 YBR072C-AYBR072C-A 162 nt1.19□□□□□ -2.22
UBC11P52492 YSP1YHR155W 3687 nt1.18□□□□□ -2.22
UBC11P52492 BRR2YER172C 6492 nt1.17□□□□□ -2.22
UBC11P52492 snR81snR81 201 nt1.16□□□□□ -2.22
UBC11P52492 tQ(UUG)E2tQ(UUG)E2 72 nt1.15□□□□□ -2.23
UBC11P52492 SPT7YBR081C 3999 nt1.15□□□□□ -2.23
UBC11P52492 YJR029WYJR029W 5268 nt1.15□□□□□ -2.23
UBC11P52492 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.23
UBC11P52492 CLU1YMR012W 3834 nt1.13□□□□□ -2.23
UBC11P52492 RPM2YML091C 3609 nt1.13□□□□□ -2.23
UBC11P52492 tS(GCU)Q1tS(GCU)Q1 86 nt1.13□□□□□ -2.23
UBC11P52492 GLG1YKR058W 1851 nt1.13□□□□□ -2.23
UBC11P52492 YAL037C-AYAL037C-A 93 nt1.12□□□□□ -2.23
UBC11P52492 NNF2YGR089W 2811 nt1.12□□□□□ -2.23
UBC11P52492 YIL142C-AYIL142C-A 333 nt1.1□□□□□ -2.23
UBC11P52492 LAA1YJL207C 6045 nt1.1□□□□□ -2.23
UBC11P52492 YBR196C-AYBR196C-A 150 nt1.09□□□□□ -2.23
UBC11P52492 ULP2YIL031W 3105 nt1.09□□□□□ -2.24
UBC11P52492 YGR130CYGR130C 2451 nt1.08□□□□□ -2.24
UBC11P52492 YOL083C-AYOL083C-A 141 nt1.08□□□□□ -2.24
UBC11P52492 MSH3YCR092C 3057 nt1.07□□□□□ -2.24
UBC11P52492 SEC10YLR166C 2616 nt1.07□□□□□ -2.24
UBC11P52492 RKR1YMR247C 4689 nt1.03□□□□□ -2.24
UBC11P52492 YLL006W-AYLL006W-A 177 nt1.03□□□□□ -2.24
UBC11P52492 YLL066W-BYLL066W-B 171 nt1.02□□□□□ -2.25
UBC11P52492 NST1YNL091W 3723 nt1.02□□□□□ -2.25
UBC11P52492 CSE1YGL238W 2883 nt1.02□□□□□ -2.25
UBC11P52492 CAT8YMR280C 4302 nt1.01□□□□□ -2.25
UBC11P52492 YBL071C-BYBL071C-B 99 nt1.01□□□□□ -2.25
UBC11P52492 ANS1YHR126C 480 nt1□□□□□ -2.25
UBC11P52492 snR45snR45 172 nt1□□□□□ -2.25
UBC11P52492 HUG1YML058W-A 207 nt0.99□□□□□ -2.25
UBC11P52492 BUD3YCL014W 4911 nt0.99□□□□□ -2.25
UBC11P52492 RPS26AYGL189C 360 nt0.98□□□□□ -2.25
UBC11P52492 EST1YLR233C 2100 nt0.97□□□□□ -2.25
UBC11P52492 YLR286W-AYLR286W-A 135 nt0.97□□□□□ -2.25
UBC11P52492 snR62snR62 100 nt0.96□□□□□ -2.26
UBC11P52492 tD(GUC)QtD(GUC)Q 75 nt0.96□□□□□ -2.26
UBC11P52492 snR69snR69 101 nt0.95□□□□□ -2.26
UBC11P52492 NIP1YMR309C 2439 nt0.95□□□□□ -2.26
UBC11P52492 SCC2YDR180W 4482 nt0.92□□□□□ -2.26
UBC11P52492 YOL164W-AYOL164W-A 183 nt0.92□□□□□ -2.26
UBC11P52492 YOR192C-BYOR192C-B 5313 nt0.92□□□□□ -2.26
UBC11P52492 YBL100W-CYBL100W-C 120 nt0.91□□□□□ -2.26
UBC11P52492 NUP192YJL039C 5052 nt0.91□□□□□ -2.26
UBC11P52492 RDS3YPR094W 324 nt0.89□□□□□ -2.27
UBC11P52492 YPR117WYPR117W 7470 nt0.89□□□□□ -2.27
UBC11P52492 MYO1YHR023W 5787 nt0.88□□□□□ -2.27
UBC11P52492 BUL2YML111W 2763 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 58.8 ms