Protein–RNA interactions for Protein: P46963

CTK3, CTD kinase subunit gamma, yeastyeast

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK3P46963 YML002WYML002W 2214 nt0.62□□□□□ -2.31
CTK3P46963 YKL100W-AYKL100W-A 90 nt0.61□□□□□ -2.31
CTK3P46963 YLR282CYLR282C 342 nt0.61□□□□□ -2.31
CTK3P46963 YOR161W-AYOR161W-A 81 nt0.6□□□□□ -2.31
CTK3P46963 snR49snR49 165 nt0.6□□□□□ -2.31
CTK3P46963 YGL123C-AYGL123C-A 231 nt0.59□□□□□ -2.31
CTK3P46963 BLI1YKL061W 342 nt0.59□□□□□ -2.31
CTK3P46963 FYV10YIL097W 1551 nt0.58□□□□□ -2.32
CTK3P46963 PRP5YBR237W 2550 nt0.58□□□□□ -2.32
CTK3P46963 snR55snR55 98 nt0.57□□□□□ -2.32
CTK3P46963 tF(GAA)QtF(GAA)Q 75 nt0.57□□□□□ -2.32
CTK3P46963 YIR030W-AYIR030W-A 384 nt0.57□□□□□ -2.32
CTK3P46963 YML099W-AYML099W-A 330 nt0.57□□□□□ -2.32
CTK3P46963 UTP20YBL004W 7482 nt0.57□□□□□ -2.32
CTK3P46963 HAL9YOL089C 3093 nt0.56□□□□□ -2.32
CTK3P46963 ULI1YFR026C 510 nt0.56□□□□□ -2.32
CTK3P46963 YJL127W-AYJL127W-A 117 nt0.56□□□□□ -2.32
CTK3P46963 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
CTK3P46963 tN(GUU)QtN(GUU)Q 71 nt0.55□□□□□ -2.32
CTK3P46963 YBR182C-AYBR182C-A 195 nt0.55□□□□□ -2.32
CTK3P46963 YKU70YMR284W 1809 nt0.54□□□□□ -2.32
CTK3P46963 OST4YDL232W 111 nt0.54□□□□□ -2.32
CTK3P46963 YGL041CYGL041C 204 nt0.54□□□□□ -2.32
CTK3P46963 COX12YLR038C 252 nt0.54□□□□□ -2.32
CTK3P46963 YOL155W-AYOL155W-A 135 nt0.54□□□□□ -2.32
CTK3P46963 PRP42YDR235W 1635 nt0.53□□□□□ -2.32
CTK3P46963 YIL134C-AYIL134C-A 204 nt0.53□□□□□ -2.32
CTK3P46963 TRS65YGR166W 1683 nt0.53□□□□□ -2.33
CTK3P46963 YER053C-AYER053C-A 114 nt0.52□□□□□ -2.33
CTK3P46963 YGL188C-AYGL188C-A 141 nt0.52□□□□□ -2.33
CTK3P46963 YOR345CYOR345C 351 nt0.52□□□□□ -2.33
CTK3P46963 BEM3YPL115C 3387 nt0.52□□□□□ -2.33
CTK3P46963 PET111YMR257C 2403 nt0.52□□□□□ -2.33
CTK3P46963 YCR022CYCR022C 345 nt0.51□□□□□ -2.33
CTK3P46963 YCR038W-AYCR038W-A 126 nt0.51□□□□□ -2.33
CTK3P46963 MLP1YKR095W 5628 nt0.51□□□□□ -2.33
CTK3P46963 ABF2YMR072W 552 nt0.5□□□□□ -2.33
CTK3P46963 YOR192C-BYOR192C-B 5313 nt0.49□□□□□ -2.33
CTK3P46963 YIL002W-AYIL002W-A 210 nt0.48□□□□□ -2.33
CTK3P46963 YLR041WYLR041W 321 nt0.48□□□□□ -2.33
CTK3P46963 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
CTK3P46963 YDR366CYDR366C 399 nt0.46□□□□□ -2.34
CTK3P46963 YHR131W-AYHR131W-A 246 nt0.46□□□□□ -2.34
CTK3P46963 APQ12YIL040W 417 nt0.46□□□□□ -2.34
CTK3P46963 YBR131C-AYBR131C-A 90 nt0.46□□□□□ -2.34
CTK3P46963 ULP2YIL031W 3105 nt0.45□□□□□ -2.34
CTK3P46963 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
CTK3P46963 snR80snR80 171 nt0.45□□□□□ -2.34
CTK3P46963 UTP8YGR128C 2142 nt0.44□□□□□ -2.34
CTK3P46963 YOR302WYOR302W 78 nt0.44□□□□□ -2.34
CTK3P46963 NNF2YGR089W 2811 nt0.44□□□□□ -2.34
CTK3P46963 snR8snR8 190 nt0.43□□□□□ -2.34
CTK3P46963 SNU13YEL026W 381 nt0.43□□□□□ -2.34
CTK3P46963 SBH1YER087C-B 249 nt0.42□□□□□ -2.34
CTK3P46963 AI1Q0050 2505 nt0.4□□□□□ -2.35
CTK3P46963 YDR371C-AYDR371C-A 105 nt0.38□□□□□ -2.35
CTK3P46963 YLL006W-AYLL006W-A 177 nt0.38□□□□□ -2.35
CTK3P46963 YLR232WYLR232W 348 nt0.38□□□□□ -2.35
CTK3P46963 RPS26AYGL189C 360 nt0.37□□□□□ -2.35
CTK3P46963 YNL097C-BYNL097C-B 123 nt0.37□□□□□ -2.35
CTK3P46963 TAH1YCR060W 336 nt0.36□□□□□ -2.35
CTK3P46963 NIP1YMR309C 2439 nt0.36□□□□□ -2.35
CTK3P46963 ORC3YLL004W 1851 nt0.35□□□□□ -2.35
CTK3P46963 PRP39YML046W 1890 nt0.35□□□□□ -2.35
CTK3P46963 YEL014CYEL014C 306 nt0.35□□□□□ -2.35
CTK3P46963 YBR072C-AYBR072C-A 162 nt0.35□□□□□ -2.35
CTK3P46963 YJL182CYJL182C 318 nt0.34□□□□□ -2.36
CTK3P46963 MLP2YIL149C 5040 nt0.33□□□□□ -2.36
CTK3P46963 IQG1YPL242C 4488 nt0.33□□□□□ -2.36
CTK3P46963 BUL2YML111W 2763 nt0.32□□□□□ -2.36
CTK3P46963 YDR544CYDR544C 429 nt0.32□□□□□ -2.36
CTK3P46963 BIR1YJR089W 2865 nt0.31□□□□□ -2.36
CTK3P46963 YBL039C-AYBL039C-A 84 nt0.31□□□□□ -2.36
CTK3P46963 YGL182CYGL182C 324 nt0.29□□□□□ -2.36
CTK3P46963 YBL100W-BYBL100W-B 5313 nt0.29□□□□□ -2.36
CTK3P46963 SDH6YDR379C-A 240 nt0.28□□□□□ -2.36
CTK3P46963 YOR186C-AYOR186C-A 210 nt0.28□□□□□ -2.36
CTK3P46963 YNL054W-BYNL054W-B 5250 nt0.27□□□□□ -2.37
CTK3P46963 GLG1YKR058W 1851 nt0.27□□□□□ -2.37
CTK3P46963 RCO1YMR075W 2055 nt0.27□□□□□ -2.37
CTK3P46963 YER078W-AYER078W-A 165 nt0.27□□□□□ -2.37
CTK3P46963 YMR158W-BYMR158W-B 321 nt0.27□□□□□ -2.37
CTK3P46963 snR52snR52 92 nt0.25□□□□□ -2.37
CTK3P46963 COG6YNL041C 2520 nt0.25□□□□□ -2.37
CTK3P46963 YEL073CYEL073C 324 nt0.24□□□□□ -2.37
CTK3P46963 snR46snR46 197 nt0.24□□□□□ -2.37
CTK3P46963 CSE1YGL238W 2883 nt0.24□□□□□ -2.37
CTK3P46963 YOR381W-AYOR381W-A 168 nt0.22□□□□□ -2.37
CTK3P46963 YDR406W-AYDR406W-A 246 nt0.21□□□□□ -2.38
CTK3P46963 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
CTK3P46963 YLR342W-AYLR342W-A 174 nt0.2□□□□□ -2.38
CTK3P46963 YOR314W-AYOR314W-A 111 nt0.2□□□□□ -2.38
CTK3P46963 ESP1YGR098C 4893 nt0.19□□□□□ -2.38
CTK3P46963 THO2YNL139C 4794 nt0.18□□□□□ -2.38
CTK3P46963 YOR170WYOR170W 306 nt0.18□□□□□ -2.38
CTK3P46963 RPM2YML091C 3609 nt0.17□□□□□ -2.38
CTK3P46963 SPG3YDR504C 384 nt0.17□□□□□ -2.38
CTK3P46963 YMR046W-AYMR046W-A 129 nt0.16□□□□□ -2.38
CTK3P46963 JLP2YMR132C 627 nt0.15□□□□□ -2.39
CTK3P46963 YDR210WYDR210W 228 nt0.14□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms