Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YOR008C-AYOR008C-A 225 nt0.52□□□□□ -2.33
NDE1P40215 PAU12YGR294W 363 nt0.51□□□□□ -2.33
NDE1P40215 ULI1YFR026C 510 nt0.5□□□□□ -2.33
NDE1P40215 YLR041WYLR041W 321 nt0.5□□□□□ -2.33
NDE1P40215 YOR345CYOR345C 351 nt0.5□□□□□ -2.33
NDE1P40215 SBH1YER087C-B 249 nt0.49□□□□□ -2.33
NDE1P40215 RAD61YDR014W 1944 nt0.48□□□□□ -2.33
NDE1P40215 tN(GUU)QtN(GUU)Q 71 nt0.48□□□□□ -2.33
NDE1P40215 ULP2YIL031W 3105 nt0.47□□□□□ -2.33
NDE1P40215 YKL145W-AYKL145W-A 93 nt0.47□□□□□ -2.33
NDE1P40215 NNF2YGR089W 2811 nt0.47□□□□□ -2.33
NDE1P40215 YPR092WYPR092W 306 nt0.46□□□□□ -2.34
NDE1P40215 QCR9YGR183C 201 nt0.45□□□□□ -2.34
NDE1P40215 YOR015WYOR015W 360 nt0.45□□□□□ -2.34
NDE1P40215 YOR161W-AYOR161W-A 81 nt0.45□□□□□ -2.34
NDE1P40215 YGR069WYGR069W 336 nt0.44□□□□□ -2.34
NDE1P40215 YMR172C-AYMR172C-A 384 nt0.44□□□□□ -2.34
NDE1P40215 YHR131W-AYHR131W-A 246 nt0.43□□□□□ -2.34
NDE1P40215 YGL052WYGL052W 306 nt0.42□□□□□ -2.34
NDE1P40215 YOR192C-BYOR192C-B 5313 nt0.4□□□□□ -2.34
NDE1P40215 YDR366CYDR366C 399 nt0.4□□□□□ -2.35
NDE1P40215 ABF2YMR072W 552 nt0.4□□□□□ -2.35
NDE1P40215 YOL014WYOL014W 375 nt0.4□□□□□ -2.35
NDE1P40215 YDR524W-CYDR524W-C 90 nt0.39□□□□□ -2.35
NDE1P40215 RPS26AYGL189C 360 nt0.38□□□□□ -2.35
NDE1P40215 COX12YLR038C 252 nt0.38□□□□□ -2.35
NDE1P40215 RPM2YML091C 3609 nt0.38□□□□□ -2.35
NDE1P40215 NIP1YMR309C 2439 nt0.37□□□□□ -2.35
NDE1P40215 YDR371C-AYDR371C-A 105 nt0.37□□□□□ -2.35
NDE1P40215 SNU13YEL026W 381 nt0.37□□□□□ -2.35
NDE1P40215 YNL277W-AYNL277W-A 189 nt0.37□□□□□ -2.35
NDE1P40215 AI1Q0050 2505 nt0.37□□□□□ -2.35
NDE1P40215 TRS65YGR166W 1683 nt0.37□□□□□ -2.35
NDE1P40215 BIR1YJR089W 2865 nt0.34□□□□□ -2.35
NDE1P40215 YIL002W-AYIL002W-A 210 nt0.34□□□□□ -2.36
NDE1P40215 YLL006W-AYLL006W-A 177 nt0.34□□□□□ -2.36
NDE1P40215 YNL146WYNL146W 303 nt0.34□□□□□ -2.36
NDE1P40215 YBL100W-BYBL100W-B 5313 nt0.33□□□□□ -2.36
NDE1P40215 snR65snR65 100 nt0.33□□□□□ -2.36
NDE1P40215 YOR186C-AYOR186C-A 210 nt0.33□□□□□ -2.36
NDE1P40215 snR74snR74 88 nt0.32□□□□□ -2.36
NDE1P40215 YER053C-AYER053C-A 114 nt0.3□□□□□ -2.36
NDE1P40215 YIR030W-AYIR030W-A 384 nt0.3□□□□□ -2.36
NDE1P40215 YOL013W-AYOL013W-A 192 nt0.29□□□□□ -2.36
NDE1P40215 BUL2YML111W 2763 nt0.29□□□□□ -2.36
NDE1P40215 UTP8YGR128C 2142 nt0.28□□□□□ -2.37
NDE1P40215 ORC3YLL004W 1851 nt0.27□□□□□ -2.37
NDE1P40215 RCO1YMR075W 2055 nt0.26□□□□□ -2.37
NDE1P40215 YBR182C-AYBR182C-A 195 nt0.25□□□□□ -2.37
NDE1P40215 YKU70YMR284W 1809 nt0.24□□□□□ -2.37
NDE1P40215 MYO1YHR023W 5787 nt0.24□□□□□ -2.37
NDE1P40215 YLR232WYLR232W 348 nt0.24□□□□□ -2.37
NDE1P40215 YBR072C-AYBR072C-A 162 nt0.24□□□□□ -2.37
NDE1P40215 GLG1YKR058W 1851 nt0.22□□□□□ -2.37
NDE1P40215 YCR038W-AYCR038W-A 126 nt0.22□□□□□ -2.37
NDE1P40215 ESP1YGR098C 4893 nt0.2□□□□□ -2.38
NDE1P40215 tF(GAA)QtF(GAA)Q 75 nt0.2□□□□□ -2.38
NDE1P40215 YER181CYER181C 324 nt0.2□□□□□ -2.38
NDE1P40215 YNL054W-BYNL054W-B 5250 nt0.2□□□□□ -2.38
NDE1P40215 snR55snR55 98 nt0.19□□□□□ -2.38
NDE1P40215 YML099W-AYML099W-A 330 nt0.19□□□□□ -2.38
NDE1P40215 snR49snR49 165 nt0.19□□□□□ -2.38
NDE1P40215 YPR010C-AYPR010C-A 219 nt0.16□□□□□ -2.38
NDE1P40215 YEL073CYEL073C 324 nt0.15□□□□□ -2.39
NDE1P40215 APQ12YIL040W 417 nt0.14□□□□□ -2.39
NDE1P40215 YMR158W-BYMR158W-B 321 nt0.14□□□□□ -2.39
NDE1P40215 YER078W-AYER078W-A 165 nt0.13□□□□□ -2.39
NDE1P40215 CSE1YGL238W 2883 nt0.12□□□□□ -2.39
NDE1P40215 YPL152W-AYPL152W-A 99 nt0.11□□□□□ -2.39
NDE1P40215 THO2YNL139C 4794 nt0.1□□□□□ -2.39
NDE1P40215 TAH1YCR060W 336 nt0.1□□□□□ -2.39
NDE1P40215 YOL155W-AYOL155W-A 135 nt0.09□□□□□ -2.4
NDE1P40215 YGL041CYGL041C 204 nt0.08□□□□□ -2.4
NDE1P40215 SDH6YDR379C-A 240 nt0.07□□□□□ -2.4
NDE1P40215 YDR544CYDR544C 429 nt0.07□□□□□ -2.4
NDE1P40215 YOR231C-AYOR231C-A 201 nt0.06□□□□□ -2.4
NDE1P40215 PRP39YML046W 1890 nt0.05□□□□□ -2.4
NDE1P40215 Q0142Q0142 177 nt0.04□□□□□ -2.4
NDE1P40215 YBR099CYBR099C 384 nt0.03□□□□□ -2.4
NDE1P40215 YBR131C-AYBR131C-A 90 nt0.02□□□□□ -2.41
NDE1P40215 COG6YNL041C 2520 nt0.02□□□□□ -2.41
NDE1P40215 YBL039C-AYBL039C-A 84 nt0.01□□□□□ -2.41
NDE1P40215 SOV1YMR066W 2697 nt-0.01□□□□□ -2.41
NDE1P40215 YGL188C-AYGL188C-A 141 nt-0.01□□□□□ -2.41
NDE1P40215 YGL182CYGL182C 324 nt-0.03□□□□□ -2.41
NDE1P40215 YOR314W-AYOR314W-A 111 nt-0.04□□□□□ -2.42
NDE1P40215 YEL014CYEL014C 306 nt-0.05□□□□□ -2.42
NDE1P40215 snR45snR45 172 nt-0.05□□□□□ -2.42
NDE1P40215 YJL182CYJL182C 318 nt-0.06□□□□□ -2.42
NDE1P40215 snR128snR128 126 nt-0.07□□□□□ -2.42
NDE1P40215 EST1YLR233C 2100 nt-0.07□□□□□ -2.42
NDE1P40215 YNL097C-BYNL097C-B 123 nt-0.11□□□□□ -2.43
NDE1P40215 YOR302WYOR302W 78 nt-0.11□□□□□ -2.43
NDE1P40215 YOR381W-AYOR381W-A 168 nt-0.13□□□□□ -2.43
NDE1P40215 snR8snR8 190 nt-0.14□□□□□ -2.43
NDE1P40215 YOR170WYOR170W 306 nt-0.15□□□□□ -2.43
NDE1P40215 tM(CAU)Q2tM(CAU)Q2 78 nt-0.16□□□□□ -2.44
NDE1P40215 YPL060C-AYPL060C-A 3315 nt-0.17□□□□□ -2.44
NDE1P40215 YDR210WYDR210W 228 nt-0.17□□□□□ -2.44
NDE1P40215 snR80snR80 171 nt-0.19□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 32.3 ms