Protein–RNA interactions for Protein: P40092

SPI1, Uncharacterized cell wall protein SPI1, yeast

Predictions only

Length 148 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	P40092	YHR007C-A	YHR007C-A	216 nt		-2.38	□□□□□ -2.79
SPI1	P40092	YJL077W-A	YJL077W-A	87 nt		-2.38	□□□□□ -2.79
SPI1	P40092	YOR121C	YOR121C	306 nt		-2.38	□□□□□ -2.79
SPI1	P40092	YPR002C-A	YPR002C-A	198 nt		-2.38	□□□□□ -2.79
SPI1	P40092	snR81	snR81	201 nt		-2.39	□□□□□ -2.79
SPI1	P40092	YBR285W	YBR285W	435 nt		-2.4	□□□□□ -2.79
SPI1	P40092	ATG16	YMR159C	453 nt		-2.41	□□□□□ -2.8
SPI1	P40092	YAF9	YNL107W	681 nt		-2.46	□□□□□ -2.8
SPI1	P40092	tQ(UUG)Q	tQ(UUG)Q	76 nt		-2.47	□□□□□ -2.8
SPI1	P40092	snR39B	snR39B	96 nt		-2.47	□□□□□ -2.8
SPI1	P40092	snR77	snR77	88 nt		-2.48	□□□□□ -2.81
SPI1	P40092	YFL012W	YFL012W	447 nt		-2.49	□□□□□ -2.81
SPI1	P40092	VPS20	YMR077C	666 nt		-2.5	□□□□□ -2.81
SPI1	P40092	YDR426C	YDR426C	378 nt		-2.51	□□□□□ -2.81
SPI1	P40092	YMR315W-A	YMR315W-A	108 nt		-2.51	□□□□□ -2.81
SPI1	P40092	YNL266W	YNL266W	420 nt		-2.51	□□□□□ -2.81
SPI1	P40092	YNL205C	YNL205C	423 nt		-2.52	□□□□□ -2.81
SPI1	P40092	YER090C-A	YER090C-A	90 nt		-2.53	□□□□□ -2.81
SPI1	P40092	BI2	Q0110	1272 nt		-2.53	□□□□□ -2.81
SPI1	P40092	RDS3	YPR094W	324 nt		-2.53	□□□□□ -2.81
SPI1	P40092	YDL011C	YDL011C	324 nt		-2.54	□□□□□ -2.82
SPI1	P40092	YMR193C-A	YMR193C-A	387 nt		-2.54	□□□□□ -2.82
SPI1	P40092	YKL044W	YKL044W	321 nt		-2.56	□□□□□ -2.82
SPI1	P40092	TOM22	YNL131W	459 nt		-2.58	□□□□□ -2.82
SPI1	P40092	YOR293C-A	YOR293C-A	150 nt		-2.59	□□□□□ -2.82
SPI1	P40092	PRM3	YPL192C	402 nt		-2.59	□□□□□ -2.82
SPI1	P40092	YDR544C	YDR544C	429 nt		-2.6	□□□□□ -2.83
SPI1	P40092	YGR270C-A	YGR270C-A	219 nt		-2.6	□□□□□ -2.83
SPI1	P40092	snR50	snR50	90 nt		-2.6	□□□□□ -2.83
SPI1	P40092	YML054C-A	YML054C-A	159 nt		-2.62	□□□□□ -2.83
SPI1	P40092	YLR217W	YLR217W	324 nt		-2.65	□□□□□ -2.83
SPI1	P40092	RPS27B	YHR021C	249 nt		-2.67	□□□□□ -2.84
SPI1	P40092	PCC1	YKR095W-A	267 nt		-2.67	□□□□□ -2.84
SPI1	P40092	YLR202C	YLR202C	327 nt		-2.68	□□□□□ -2.84
SPI1	P40092	GPI15	YNL038W	690 nt		-2.68	□□□□□ -2.84
SPI1	P40092	YER175W-A	YER175W-A	165 nt		-2.69	□□□□□ -2.84
SPI1	P40092	snR69	snR69	101 nt		-2.7	□□□□□ -2.84
SPI1	P40092	YDR048C	YDR048C	315 nt		-2.7	□□□□□ -2.84
SPI1	P40092	TSC3	YBR058C-A	243 nt		-2.7	□□□□□ -2.84
SPI1	P40092	YDR543C	YDR543C	300 nt		-2.72	□□□□□ -2.84
SPI1	P40092	YGR069W	YGR069W	336 nt		-2.72	□□□□□ -2.84
SPI1	P40092	YAL068W-A	YAL068W-A	255 nt		-2.72	□□□□□ -2.84
SPI1	P40092	YML099W-A	YML099W-A	330 nt		-2.73	□□□□□ -2.85
SPI1	P40092	snR67	snR67	82 nt		-2.74	□□□□□ -2.85
SPI1	P40092	YBL071C	YBL071C	309 nt		-2.75	□□□□□ -2.85
SPI1	P40092	snR9	snR9	187 nt		-2.77	□□□□□ -2.85
SPI1	P40092	EAF6	YJR082C	342 nt		-2.77	□□□□□ -2.85
SPI1	P40092	YOR314W-A	YOR314W-A	111 nt		-2.78	□□□□□ -2.85
SPI1	P40092	YOR309C	YOR309C	381 nt		-2.82	□□□□□ -2.86
SPI1	P40092	YDL016C	YDL016C	303 nt		-2.83	□□□□□ -2.86
SPI1	P40092	YGR174W-A	YGR174W-A	87 nt		-2.84	□□□□□ -2.86
SPI1	P40092	YBL039C-A	YBL039C-A	84 nt		-2.85	□□□□□ -2.87
SPI1	P40092	YGL149W	YGL149W	306 nt		-2.87	□□□□□ -2.87
SPI1	P40092	YDR102C	YDR102C	333 nt		-2.88	□□□□□ -2.87
SPI1	P40092	YLL019W-A	YLL019W-A	93 nt		-2.89	□□□□□ -2.87
SPI1	P40092	snR34	snR34	203 nt		-2.89	□□□□□ -2.87
SPI1	P40092	HMRA1	YCR097W	381 nt		-2.9	□□□□□ -2.87
SPI1	P40092	YJL197C-A	YJL197C-A	282 nt		-2.9	□□□□□ -2.87
SPI1	P40092	YIL029C	YIL029C	429 nt		-2.91	□□□□□ -2.88
SPI1	P40092	YMR172C-A	YMR172C-A	384 nt		-2.91	□□□□□ -2.88
SPI1	P40092	YOR008C-A	YOR008C-A	225 nt		-2.92	□□□□□ -2.88
SPI1	P40092	YOL166W-A	YOL166W-A	156 nt		-2.97	□□□□□ -2.88
SPI1	P40092	YIR021W-A	YIR021W-A	213 nt		-2.99	□□□□□ -2.89
SPI1	P40092	YAR047C	YAR047C	321 nt		-3.01	□□□□□ -2.89
SPI1	P40092	YLR269C	YLR269C	351 nt		-3.03	□□□□□ -2.89
SPI1	P40092	YER137W-A	YER137W-A	306 nt		-3.07	□□□□□ -2.9
SPI1	P40092	YDR524W-C	YDR524W-C	90 nt		-3.08	□□□□□ -2.9
SPI1	P40092	Q0142	Q0142	177 nt		-3.08	□□□□□ -2.9
SPI1	P40092	YIL115W-A	YIL115W-A	372 nt		-3.09	□□□□□ -2.9
SPI1	P40092	ATP19	YOL077W-A	207 nt		-3.1	□□□□□ -2.91
SPI1	P40092	YOL083C-A	YOL083C-A	141 nt		-3.12	□□□□□ -2.91
SPI1	P40092	YBR182C-A	YBR182C-A	195 nt		-3.12	□□□□□ -2.91
SPI1	P40092	YER097W	YER097W	330 nt		-3.16	□□□□□ -2.92
SPI1	P40092	YLR286W-A	YLR286W-A	135 nt		-3.18	□□□□□ -2.92
SPI1	P40092	YOR072W-B	YOR072W-B	162 nt		-3.18	□□□□□ -2.92
SPI1	P40092	YDL158C	YDL158C	309 nt		-3.2	□□□□□ -2.92
SPI1	P40092	YLR342W-A	YLR342W-A	174 nt		-3.2	□□□□□ -2.92
SPI1	P40092	YOR376W-A	YOR376W-A	156 nt		-3.22	□□□□□ -2.92
SPI1	P40092	CSN9	YDR179C	489 nt		-3.23	□□□□□ -2.93
SPI1	P40092	tD(GUC)Q	tD(GUC)Q	75 nt		-3.24	□□□□□ -2.93
SPI1	P40092	YKL063C	YKL063C	504 nt		-3.27	□□□□□ -2.93
SPI1	P40092	YGR146C-A	YGR146C-A	162 nt		-3.28	□□□□□ -2.93
SPI1	P40092	YDL159C-B	YDL159C-B	177 nt		-3.33	□□□□□ -2.94
SPI1	P40092	MPC1	YGL080W	393 nt		-3.35	□□□□□ -2.95
SPI1	P40092	tM(CAU)Q2	tM(CAU)Q2	78 nt		-3.35	□□□□□ -2.95
SPI1	P40092	YFL032W	YFL032W	321 nt		-3.38	□□□□□ -2.95
SPI1	P40092	YBR178W	YBR178W	375 nt		-3.39	□□□□□ -2.95
SPI1	P40092	YFL019C	YFL019C	354 nt		-3.42	□□□□□ -2.96
SPI1	P40092	YLR406C-A	YLR406C-A	150 nt		-3.44	□□□□□ -2.96
SPI1	P40092	YOR316C-A	YOR316C-A	210 nt		-3.45	□□□□□ -2.96
SPI1	P40092	YBR196C-A	YBR196C-A	150 nt		-3.45	□□□□□ -2.96
SPI1	P40092	ATP6	Q0085	780 nt		-3.52	□□□□□ -2.97
SPI1	P40092	YJR157W	YJR157W	363 nt		-3.53	□□□□□ -2.97
SPI1	P40092	snR60	snR60	104 nt		-3.57	□□□□□ -2.98
SPI1	P40092	YLR412C-A	YLR412C-A	207 nt		-3.58	□□□□□ -2.98
SPI1	P40092	YPR197C	YPR197C	564 nt		-3.58	□□□□□ -2.98
SPI1	P40092	YOR381W-A	YOR381W-A	168 nt		-3.59	□□□□□ -2.98
SPI1	P40092	snR41	snR41	95 nt		-3.61	□□□□□ -2.99
SPI1	P40092	snR55	snR55	98 nt		-3.62	□□□□□ -2.99
SPI1	P40092	YLR299C-A	YLR299C-A	93 nt		-3.65	□□□□□ -2.99

Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms