Protein–RNA interactions for Protein: P40046

VTC1, Vacuolar transporter chaperone 1, yeastyeast

RIP-Chip data

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC1P40046 YMR193C-AYMR193C-A 387 nt0.16□□□□□ -2.38
VTC1P40046 AI1Q0050 2505 nt0.15□□□□□ -2.39
VTC1P40046 YER053C-AYER053C-A 114 nt0.15□□□□□ -2.39
VTC1P40046 YDL240C-AYDL240C-A 138 nt0.14□□□□□ -2.39
VTC1P40046 YEL073CYEL073C 324 nt0.14□□□□□ -2.39
VTC1P40046 YER097WYER097W 330 nt0.14□□□□□ -2.39
VTC1P40046 YMR172C-AYMR172C-A 384 nt0.14□□□□□ -2.39
VTC1P40046 tF(GAA)BtF(GAA)B 73 nt0.13□□□□□ -2.39
VTC1P40046 tF(GAA)FtF(GAA)F 73 nt0.13□□□□□ -2.39
VTC1P40046 tF(GAA)GtF(GAA)G 73 nt0.13□□□□□ -2.39
VTC1P40046 tF(GAA)H1tF(GAA)H1 73 nt0.13□□□□□ -2.39
VTC1P40046 tF(GAA)H2tF(GAA)H2 73 nt0.13□□□□□ -2.39
VTC1P40046 tF(GAA)MtF(GAA)M 73 nt0.13□□□□□ -2.39
VTC1P40046 tF(GAA)P1tF(GAA)P1 73 nt0.13□□□□□ -2.39
VTC1P40046 tF(GAA)P2tF(GAA)P2 73 nt0.13□□□□□ -2.39
VTC1P40046 YHR131W-AYHR131W-A 246 nt0.13□□□□□ -2.39
VTC1P40046 YNL028WYNL028W 318 nt0.13□□□□□ -2.39
VTC1P40046 YOL013W-AYOL013W-A 192 nt0.13□□□□□ -2.39
VTC1P40046 SOV1YMR066W 2697 nt0.11□□□□□ -2.39
VTC1P40046 HMRA1YCR097W 381 nt0.11□□□□□ -2.39
VTC1P40046 YDR413CYDR413C 576 nt0.11□□□□□ -2.39
VTC1P40046 YPL038W-AYPL038W-A 192 nt0.11□□□□□ -2.39
VTC1P40046 TRS65YGR166W 1683 nt0.11□□□□□ -2.39
VTC1P40046 YNL054W-BYNL054W-B 5250 nt0.1□□□□□ -2.39
VTC1P40046 MLP2YIL149C 5040 nt0.1□□□□□ -2.39
VTC1P40046 GIM4YEL003W 336 nt0.1□□□□□ -2.39
VTC1P40046 SNU13YEL026W 381 nt0.1□□□□□ -2.39
VTC1P40046 YGL149WYGL149W 306 nt0.1□□□□□ -2.39
VTC1P40046 BLI1YKL061W 342 nt0.1□□□□□ -2.39
VTC1P40046 YLL006W-AYLL006W-A 177 nt0.1□□□□□ -2.39
VTC1P40046 YPL060C-AYPL060C-A 3315 nt0.1□□□□□ -2.39
VTC1P40046 RAD61YDR014W 1944 nt0.1□□□□□ -2.39
VTC1P40046 YKL118WYKL118W 312 nt0.09□□□□□ -2.4
VTC1P40046 THO2YNL139C 4794 nt0.09□□□□□ -2.4 RIP-Chip
VTC1P40046 STE5YDR103W 2754 nt0.08□□□□□ -2.4
VTC1P40046 YGL052WYGL052W 306 nt0.08□□□□□ -2.4
VTC1P40046 YPR010C-AYPR010C-A 219 nt0.08□□□□□ -2.4
VTC1P40046 BIR1YJR089W 2865 nt0.08□□□□□ -2.4
VTC1P40046 YKU70YMR284W 1809 nt0.08□□□□□ -2.4
VTC1P40046 YDR366CYDR366C 399 nt0.07□□□□□ -2.4
VTC1P40046 YCR038W-AYCR038W-A 126 nt0.06□□□□□ -2.4
VTC1P40046 YOR072W-BYOR072W-B 162 nt0.06□□□□□ -2.4
VTC1P40046 YIL002W-AYIL002W-A 210 nt0.04□□□□□ -2.4
VTC1P40046 YNL277W-AYNL277W-A 189 nt0.04□□□□□ -2.4
VTC1P40046 tR(ACG)Q2tR(ACG)Q2 74 nt0.03□□□□□ -2.4
VTC1P40046 YHR175W-AYHR175W-A 150 nt0.02□□□□□ -2.41
VTC1P40046 YIR030W-AYIR030W-A 384 nt0.02□□□□□ -2.41
VTC1P40046 YKL100W-AYKL100W-A 90 nt0.02□□□□□ -2.41
VTC1P40046 RPL39YJL189W 156 nt0.01□□□□□ -2.41
VTC1P40046 YOL014WYOL014W 375 nt0.01□□□□□ -2.41
VTC1P40046 YBR072C-AYBR072C-A 162 nt0.01□□□□□ -2.41
VTC1P40046 snR56snR56 88 nt0□□□□□ -2.41
VTC1P40046 tF(GAA)QtF(GAA)Q 75 nt0□□□□□ -2.41
VTC1P40046 SDH6YDR379C-A 240 nt-0.01□□□□□ -2.41
VTC1P40046 APQ12YIL040W 417 nt-0.01□□□□□ -2.41
VTC1P40046 YMR158W-BYMR158W-B 321 nt-0.01□□□□□ -2.41
VTC1P40046 PRP39YML046W 1890 nt-0.01□□□□□ -2.41
VTC1P40046 YOR008C-AYOR008C-A 225 nt-0.03□□□□□ -2.41
VTC1P40046 YOR186C-AYOR186C-A 210 nt-0.03□□□□□ -2.41
VTC1P40046 YDR544CYDR544C 429 nt-0.05□□□□□ -2.42
VTC1P40046 YLR232WYLR232W 348 nt-0.05□□□□□ -2.42
VTC1P40046 TAH1YCR060W 336 nt-0.06□□□□□ -2.42
VTC1P40046 YER078W-AYER078W-A 165 nt-0.06□□□□□ -2.42
VTC1P40046 QCR9YGR183C 201 nt-0.07□□□□□ -2.42
VTC1P40046 YBL039C-AYBL039C-A 84 nt-0.07□□□□□ -2.42
VTC1P40046 YBR099CYBR099C 384 nt-0.07□□□□□ -2.42
VTC1P40046 GLG1YKR058W 1851 nt-0.07□□□□□ -2.42
VTC1P40046 YBR131C-AYBR131C-A 90 nt-0.09□□□□□ -2.42
VTC1P40046 YBR182C-AYBR182C-A 195 nt-0.09□□□□□ -2.42
VTC1P40046 CSE1YGL238W 2883 nt-0.1□□□□□ -2.43
VTC1P40046 COG6YNL041C 2520 nt-0.11□□□□□ -2.43
VTC1P40046 YGL041CYGL041C 204 nt-0.11□□□□□ -2.43
VTC1P40046 YNL097C-BYNL097C-B 123 nt-0.11□□□□□ -2.43
VTC1P40046 EST1YLR233C 2100 nt-0.11□□□□□ -2.43
VTC1P40046 snR45snR45 172 nt-0.13□□□□□ -2.43
VTC1P40046 snR65snR65 100 nt-0.14□□□□□ -2.43
VTC1P40046 YEL014CYEL014C 306 nt-0.14□□□□□ -2.43
VTC1P40046 YER181CYER181C 324 nt-0.14□□□□□ -2.43
VTC1P40046 YML099W-AYML099W-A 330 nt-0.14□□□□□ -2.43
VTC1P40046 YOR302WYOR302W 78 nt-0.14□□□□□ -2.43
VTC1P40046 YPL152W-AYPL152W-A 99 nt-0.14□□□□□ -2.43
VTC1P40046 UTP8YGR128C 2142 nt-0.14□□□□□ -2.43
VTC1P40046 snR8snR8 190 nt-0.15□□□□□ -2.43
VTC1P40046 YOR314W-AYOR314W-A 111 nt-0.15□□□□□ -2.43
VTC1P40046 YDR210WYDR210W 228 nt-0.16□□□□□ -2.44
VTC1P40046 YDR524W-CYDR524W-C 90 nt-0.16□□□□□ -2.44
VTC1P40046 YGL182CYGL182C 324 nt-0.16□□□□□ -2.44
VTC1P40046 YJL182CYJL182C 318 nt-0.16□□□□□ -2.44
VTC1P40046 snR128snR128 126 nt-0.16□□□□□ -2.44
VTC1P40046 snR49snR49 165 nt-0.17□□□□□ -2.44
VTC1P40046 snR55snR55 98 nt-0.19□□□□□ -2.44
VTC1P40046 YOR231C-AYOR231C-A 201 nt-0.19□□□□□ -2.44
VTC1P40046 RPM2YML091C 3609 nt-0.2□□□□□ -2.44
VTC1P40046 YGR164WYGR164W 336 nt-0.23□□□□□ -2.45
VTC1P40046 YOL155W-AYOL155W-A 135 nt-0.23□□□□□ -2.45
VTC1P40046 YOR381W-AYOR381W-A 168 nt-0.23□□□□□ -2.45
VTC1P40046 snR80snR80 171 nt-0.26□□□□□ -2.45
VTC1P40046 snR39BsnR39B 96 nt-0.28□□□□□ -2.45
VTC1P40046 YOR170WYOR170W 306 nt-0.3□□□□□ -2.46
VTC1P40046 YGL188C-AYGL188C-A 141 nt-0.32□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 60.1 ms