Protein–RNA interactions for Protein: P38883

RIX1, Pre-rRNA-processing protein RIX1, yeastyeast

Predicted RBP Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIX1P38883 SEC21YNL287W 2808 nt1.56□□□□□ -2.16
RIX1P38883 BRR2YER172C 6492 nt1.55□□□□□ -2.16
RIX1P38883 ALY2YJL084C 3141 nt1.54□□□□□ -2.16
RIX1P38883 KCS1YDR017C 3153 nt1.54□□□□□ -2.16
RIX1P38883 PAN2YGL094C 3348 nt1.54□□□□□ -2.16
RIX1P38883 YML002WYML002W 2214 nt1.54□□□□□ -2.16
RIX1P38883 YDR210WYDR210W 228 nt1.53□□□□□ -2.16
RIX1P38883 YAL037C-AYAL037C-A 93 nt1.53□□□□□ -2.16
RIX1P38883 KIP1YBL063W 3336 nt1.53□□□□□ -2.16
RIX1P38883 MMS4YBR098W 2076 nt1.53□□□□□ -2.16
RIX1P38883 YAR009CYAR009C 3591 nt1.53□□□□□ -2.17
RIX1P38883 KAP120YPL125W 3099 nt1.53□□□□□ -2.17
RIX1P38883 EMC5YIL027C 426 nt1.52□□□□□ -2.17
RIX1P38883 SMC1YFL008W 3678 nt1.52□□□□□ -2.17
RIX1P38883 YJL127W-AYJL127W-A 117 nt1.51□□□□□ -2.17
RIX1P38883 BIR1YJR089W 2865 nt1.5□□□□□ -2.17
RIX1P38883 snR62snR62 100 nt1.5□□□□□ -2.17
RIX1P38883 YLR041WYLR041W 321 nt1.5□□□□□ -2.17
RIX1P38883 YNL266WYNL266W 420 nt1.5□□□□□ -2.17
RIX1P38883 snR14snR14 160 nt1.5□□□□□ -2.17
RIX1P38883 YBR072C-AYBR072C-A 162 nt1.5□□□□□ -2.17
RIX1P38883 YLR232WYLR232W 348 nt1.49□□□□□ -2.17
RIX1P38883 SLX4YLR135W 2247 nt1.49□□□□□ -2.17
RIX1P38883 FYV10YIL097W 1551 nt1.49□□□□□ -2.17
RIX1P38883 SMC4YLR086W 4257 nt1.48□□□□□ -2.17
RIX1P38883 KAP122YGL016W 3246 nt1.47□□□□□ -2.17
RIX1P38883 SEC1YDR164C 2175 nt1.47□□□□□ -2.17
RIX1P38883 PIK1YNL267W 3201 nt1.46□□□□□ -2.18
RIX1P38883 NOP9YJL010C 2001 nt1.45□□□□□ -2.18
RIX1P38883 BST1YFL025C 3090 nt1.45□□□□□ -2.18
RIX1P38883 YOL083C-AYOL083C-A 141 nt1.45□□□□□ -2.18
RIX1P38883 VAM6YDL077C 3150 nt1.45□□□□□ -2.18
RIX1P38883 YGR146C-AYGR146C-A 162 nt1.44□□□□□ -2.18
RIX1P38883 snR190snR190 190 nt1.44□□□□□ -2.18
RIX1P38883 NUP192YJL039C 5052 nt1.44□□□□□ -2.18
RIX1P38883 TRM732YMR259C 4263 nt1.42□□□□□ -2.18
RIX1P38883 STO1YMR125W 2586 nt1.42□□□□□ -2.18
RIX1P38883 YBL071C-BYBL071C-B 99 nt1.41□□□□□ -2.18
RIX1P38883 SET3YKR029C 2256 nt1.41□□□□□ -2.18
RIX1P38883 RAD9YDR217C 3930 nt1.4□□□□□ -2.19
RIX1P38883 GEA2YEL022W 4380 nt1.4□□□□□ -2.19
RIX1P38883 ASE1YOR058C 2658 nt1.39□□□□□ -2.19
RIX1P38883 RPL26BYGR034W 384 nt1.39□□□□□ -2.19
RIX1P38883 WAR1YML076C 2835 nt1.39□□□□□ -2.19
RIX1P38883 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
RIX1P38883 EST2YLR318W 2655 nt1.36□□□□□ -2.19
RIX1P38883 NST1YNL091W 3723 nt1.36□□□□□ -2.19
RIX1P38883 YCS4YLR272C 3531 nt1.35□□□□□ -2.19
RIX1P38883 YDR034C-AYDR034C-A 177 nt1.35□□□□□ -2.19
RIX1P38883 YBR196C-AYBR196C-A 150 nt1.34□□□□□ -2.19
RIX1P38883 NUP188YML103C 4968 nt1.33□□□□□ -2.2
RIX1P38883 RPS26AYGL189C 360 nt1.33□□□□□ -2.2
RIX1P38883 AZF1YOR113W 2745 nt1.33□□□□□ -2.2
RIX1P38883 YDL073WYDL073W 2955 nt1.32□□□□□ -2.2
RIX1P38883 CAT8YMR280C 4302 nt1.31□□□□□ -2.2
RIX1P38883 EMT1tM(CAU)D 73 nt1.31□□□□□ -2.2
RIX1P38883 EMT5tM(CAU)J1 73 nt1.31□□□□□ -2.2
RIX1P38883 EMT3tM(CAU)J2 73 nt1.31□□□□□ -2.2
RIX1P38883 EMT4tM(CAU)M 73 nt1.31□□□□□ -2.2
RIX1P38883 EMT2tM(CAU)O2 73 nt1.31□□□□□ -2.2
RIX1P38883 YOL164W-AYOL164W-A 183 nt1.31□□□□□ -2.2
RIX1P38883 APL3YBL037W 3078 nt1.31□□□□□ -2.2
RIX1P38883 SWI4YER111C 3282 nt1.3□□□□□ -2.2
RIX1P38883 BEM2YER155C 6504 nt1.3□□□□□ -2.2
RIX1P38883 YBL100W-CYBL100W-C 120 nt1.3□□□□□ -2.2
RIX1P38883 RPM2YML091C 3609 nt1.29□□□□□ -2.2
RIX1P38883 SEC3YER008C 4011 nt1.29□□□□□ -2.2
RIX1P38883 ROM2YLR371W 4071 nt1.28□□□□□ -2.2
RIX1P38883 SEC10YLR166C 2616 nt1.28□□□□□ -2.2
RIX1P38883 MSN5YDR335W 3675 nt1.28□□□□□ -2.2
RIX1P38883 YGR240C-AYGR240C-A 201 nt1.28□□□□□ -2.2
RIX1P38883 YBR200W-AYBR200W-A 165 nt1.28□□□□□ -2.2
RIX1P38883 BEM3YPL115C 3387 nt1.28□□□□□ -2.21
RIX1P38883 NNF2YGR089W 2811 nt1.27□□□□□ -2.21
RIX1P38883 UBP3YER151C 2739 nt1.27□□□□□ -2.21
RIX1P38883 tN(GUU)QtN(GUU)Q 71 nt1.27□□□□□ -2.21
RIX1P38883 PRP16YKR086W 3216 nt1.27□□□□□ -2.21
RIX1P38883 CDC39YCR093W 6327 nt1.27□□□□□ -2.21
RIX1P38883 SEC8YPR055W 3198 nt1.26□□□□□ -2.21
RIX1P38883 LAA1YJL207C 6045 nt1.24□□□□□ -2.21
RIX1P38883 CDC25YLR310C 4770 nt1.24□□□□□ -2.21
RIX1P38883 YLR286W-AYLR286W-A 135 nt1.24□□□□□ -2.21
RIX1P38883 NUP145YGL092W 3954 nt1.23□□□□□ -2.21
RIX1P38883 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
RIX1P38883 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
RIX1P38883 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
RIX1P38883 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
RIX1P38883 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
RIX1P38883 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
RIX1P38883 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
RIX1P38883 YLR399W-AYLR399W-A 105 nt1.22□□□□□ -2.21
RIX1P38883 YPR160W-AYPR160W-A 81 nt1.22□□□□□ -2.21
RIX1P38883 snR47snR47 99 nt1.22□□□□□ -2.21
RIX1P38883 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
RIX1P38883 MSH3YCR092C 3057 nt1.21□□□□□ -2.22
RIX1P38883 ORC3YLL004W 1851 nt1.2□□□□□ -2.22
RIX1P38883 YGR130CYGR130C 2451 nt1.2□□□□□ -2.22
RIX1P38883 YSP1YHR155W 3687 nt1.19□□□□□ -2.22
RIX1P38883 GLG1YKR058W 1851 nt1.18□□□□□ -2.22
RIX1P38883 CLU1YMR012W 3834 nt1.17□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms