Protein–RNA interactions for Protein: P38861

NMD3, 60S ribosomal export protein NMD3, yeastyeast

Known RBP Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD3P38861 YLR232WYLR232W 348 nt1.87□□□□□ -2.11
NMD3P38861 SKI3YPR189W 4299 nt1.87□□□□□ -2.11
NMD3P38861 NOP9YJL010C 2001 nt1.84□□□□□ -2.11
NMD3P38861 SLX4YLR135W 2247 nt1.84□□□□□ -2.11
NMD3P38861 RCO1YMR075W 2055 nt1.84□□□□□ -2.12
NMD3P38861 YLL066W-BYLL066W-B 171 nt1.83□□□□□ -2.12
NMD3P38861 KAP120YPL125W 3099 nt1.83□□□□□ -2.12
NMD3P38861 SMC4YLR086W 4257 nt1.83□□□□□ -2.12
NMD3P38861 RPL26BYGR034W 384 nt1.82□□□□□ -2.12
NMD3P38861 YGR146C-AYGR146C-A 162 nt1.82□□□□□ -2.12
NMD3P38861 YAL037C-AYAL037C-A 93 nt1.82□□□□□ -2.12
NMD3P38861 SEC21YNL287W 2808 nt1.81□□□□□ -2.12
NMD3P38861 FYV10YIL097W 1551 nt1.81□□□□□ -2.12
NMD3P38861 YJL127W-AYJL127W-A 117 nt1.81□□□□□ -2.12
NMD3P38861 CHS1YNL192W 3396 nt1.81□□□□□ -2.12
NMD3P38861 BIR1YJR089W 2865 nt1.81□□□□□ -2.12
NMD3P38861 COG6YNL041C 2520 nt1.81□□□□□ -2.12
NMD3P38861 snR81snR81 201 nt1.79□□□□□ -2.12
NMD3P38861 YDR210WYDR210W 228 nt1.79□□□□□ -2.12
NMD3P38861 snR14snR14 160 nt1.79□□□□□ -2.12
NMD3P38861 KAP122YGL016W 3246 nt1.78□□□□□ -2.12
NMD3P38861 SEC1YDR164C 2175 nt1.78□□□□□ -2.12
NMD3P38861 BRR2YER172C 6492 nt1.78□□□□□ -2.12
NMD3P38861 SSK2YNR031C 4740 nt1.78□□□□□ -2.12
NMD3P38861 snR190snR190 190 nt1.78□□□□□ -2.12
NMD3P38861 YNL266WYNL266W 420 nt1.77□□□□□ -2.13
NMD3P38861 NUP157YER105C 4176 nt1.77□□□□□ -2.13
NMD3P38861 snR45snR45 172 nt1.76□□□□□ -2.13
NMD3P38861 SEC3YER008C 4011 nt1.75□□□□□ -2.13
NMD3P38861 YBR072C-AYBR072C-A 162 nt1.75□□□□□ -2.13
NMD3P38861 SET3YKR029C 2256 nt1.75□□□□□ -2.13
NMD3P38861 STO1YMR125W 2586 nt1.74□□□□□ -2.13
NMD3P38861 WAR1YML076C 2835 nt1.74□□□□□ -2.13
NMD3P38861 CFT1YDR301W 4074 nt1.73□□□□□ -2.13
NMD3P38861 BST1YFL025C 3090 nt1.73□□□□□ -2.13
NMD3P38861 snR62snR62 100 nt1.72□□□□□ -2.13
NMD3P38861 SWI4YER111C 3282 nt1.72□□□□□ -2.13
NMD3P38861 NUP145YGL092W 3954 nt1.71□□□□□ -2.14
NMD3P38861 MSH3YCR092C 3057 nt1.7□□□□□ -2.14
NMD3P38861 SEC8YPR055W 3198 nt1.7□□□□□ -2.14
NMD3P38861 APL3YBL037W 3078 nt1.69□□□□□ -2.14
NMD3P38861 TRM732YMR259C 4263 nt1.69□□□□□ -2.14
NMD3P38861 GEA2YEL022W 4380 nt1.69□□□□□ -2.14
NMD3P38861 ASE1YOR058C 2658 nt1.67□□□□□ -2.14
NMD3P38861 PIK1YNL267W 3201 nt1.67□□□□□ -2.14
NMD3P38861 YDL073WYDL073W 2955 nt1.67□□□□□ -2.14
NMD3P38861 YBR200W-AYBR200W-A 165 nt1.67□□□□□ -2.14
NMD3P38861 MSN5YDR335W 3675 nt1.66□□□□□ -2.14
NMD3P38861 YGR130CYGR130C 2451 nt1.66□□□□□ -2.14
NMD3P38861 SPC110YDR356W 2835 nt1.66□□□□□ -2.14
NMD3P38861 CCH1YGR217W 6120 nt1.65□□□□□ -2.14
NMD3P38861 YLR399W-AYLR399W-A 105 nt1.64□□□□□ -2.15
NMD3P38861 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
NMD3P38861 BEM3YPL115C 3387 nt1.62□□□□□ -2.15
NMD3P38861 YSP1YHR155W 3687 nt1.62□□□□□ -2.15
NMD3P38861 IRA1YBR140C 9279 nt1.61□□□□□ -2.15
NMD3P38861 YNL284C-BYNL284C-B 5268 nt1.61□□□□□ -2.15
NMD3P38861 PRP16YKR086W 3216 nt1.61□□□□□ -2.15
NMD3P38861 NUP188YML103C 4968 nt1.6□□□□□ -2.15
NMD3P38861 MEC1YBR136W 7107 nt1.6□□□□□ -2.15
NMD3P38861 YBR196C-AYBR196C-A 150 nt1.6□□□□□ -2.15
NMD3P38861 FYV8YGR196C 2454 nt1.58□□□□□ -2.16
NMD3P38861 PAU12YGR294W 363 nt1.58□□□□□ -2.16
NMD3P38861 YBL100W-CYBL100W-C 120 nt1.58□□□□□ -2.16
NMD3P38861 YOL083C-AYOL083C-A 141 nt1.58□□□□□ -2.16
NMD3P38861 PAU24YBR301W 363 nt1.58□□□□□ -2.16
NMD3P38861 ULP2YIL031W 3105 nt1.57□□□□□ -2.16
NMD3P38861 EST2YLR318W 2655 nt1.57□□□□□ -2.16
NMD3P38861 YPR160W-AYPR160W-A 81 nt1.56□□□□□ -2.16
NMD3P38861 AZF1YOR113W 2745 nt1.55□□□□□ -2.16
NMD3P38861 YBL071C-BYBL071C-B 99 nt1.55□□□□□ -2.16
NMD3P38861 PET127YOR017W 2403 nt1.55□□□□□ -2.16
NMD3P38861 GLG1YKR058W 1851 nt1.54□□□□□ -2.16
NMD3P38861 HKR1YDR420W 5409 nt1.54□□□□□ -2.16
NMD3P38861 SEC10YLR166C 2616 nt1.53□□□□□ -2.16
NMD3P38861 LAA1YJL207C 6045 nt1.52□□□□□ -2.17
NMD3P38861 RPS26AYGL189C 360 nt1.52□□□□□ -2.17
NMD3P38861 CDC39YCR093W 6327 nt1.51□□□□□ -2.17
NMD3P38861 IML1YJR138W 4755 nt1.51□□□□□ -2.17
NMD3P38861 NNF2YGR089W 2811 nt1.49□□□□□ -2.17
NMD3P38861 UBP3YER151C 2739 nt1.49□□□□□ -2.17
NMD3P38861 YDR034C-AYDR034C-A 177 nt1.47□□□□□ -2.17
NMD3P38861 tN(GUU)QtN(GUU)Q 71 nt1.47□□□□□ -2.17
NMD3P38861 YOL164W-AYOL164W-A 183 nt1.47□□□□□ -2.17
NMD3P38861 YGR240C-AYGR240C-A 201 nt1.45□□□□□ -2.18
NMD3P38861 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
NMD3P38861 YLR286W-AYLR286W-A 135 nt1.41□□□□□ -2.18
NMD3P38861 YPL060C-AYPL060C-A 3315 nt1.4□□□□□ -2.18
NMD3P38861 tH(GUG)E1tH(GUG)E1 72 nt1.4□□□□□ -2.19
NMD3P38861 tH(GUG)E2tH(GUG)E2 72 nt1.4□□□□□ -2.19
NMD3P38861 tH(GUG)G1tH(GUG)G1 72 nt1.4□□□□□ -2.19
NMD3P38861 tH(GUG)G2tH(GUG)G2 72 nt1.4□□□□□ -2.19
NMD3P38861 tH(GUG)HtH(GUG)H 72 nt1.4□□□□□ -2.19
NMD3P38861 tH(GUG)KtH(GUG)K 72 nt1.4□□□□□ -2.19
NMD3P38861 tH(GUG)MtH(GUG)M 72 nt1.4□□□□□ -2.19
NMD3P38861 tD(GUC)QtD(GUC)Q 75 nt1.39□□□□□ -2.19
NMD3P38861 tV(UAC)BtV(UAC)B 74 nt1.37□□□□□ -2.19
NMD3P38861 tV(UAC)DtV(UAC)D 74 nt1.37□□□□□ -2.19
NMD3P38861 NST1YNL091W 3723 nt1.37□□□□□ -2.19
NMD3P38861 BUD3YCL014W 4911 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 60.1 ms