Protein–RNA interactions for Protein: P38856

YAP1801, Clathrin coat assembly protein AP180A, yeastyeast

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YAP1801P38856 LAA1YJL207C 6045 nt1.71□□□□□ -2.14
YAP1801P38856 snR39BsnR39B 96 nt1.7□□□□□ -2.14
YAP1801P38856 RCO1YMR075W 2055 nt1.7□□□□□ -2.14
YAP1801P38856 SET3YKR029C 2256 nt1.69□□□□□ -2.14
YAP1801P38856 SPC110YDR356W 2835 nt1.69□□□□□ -2.14
YAP1801P38856 SXM1YDR395W 2835 nt1.69□□□□□ -2.14
YAP1801P38856 SEC21YNL287W 2808 nt1.69□□□□□ -2.14
YAP1801P38856 ROM2YLR371W 4071 nt1.69□□□□□ -2.14
YAP1801P38856 IRA1YBR140C 9279 nt1.69□□□□□ -2.14
YAP1801P38856 NOP9YJL010C 2001 nt1.69□□□□□ -2.14
YAP1801P38856 EST2YLR318W 2655 nt1.69□□□□□ -2.14
YAP1801P38856 YHR131W-AYHR131W-A 246 nt1.68□□□□□ -2.14
YAP1801P38856 COG6YNL041C 2520 nt1.67□□□□□ -2.14
YAP1801P38856 STF2YGR008C 255 nt1.67□□□□□ -2.14
YAP1801P38856 WAR1YML076C 2835 nt1.67□□□□□ -2.14
YAP1801P38856 VPS15YBR097W 4365 nt1.67□□□□□ -2.14
YAP1801P38856 tM(CAU)Q2tM(CAU)Q2 78 nt1.66□□□□□ -2.14
YAP1801P38856 FYV10YIL097W 1551 nt1.66□□□□□ -2.14
YAP1801P38856 GEA2YEL022W 4380 nt1.66□□□□□ -2.14
YAP1801P38856 PMD1YER132C 5262 nt1.64□□□□□ -2.15
YAP1801P38856 TRM732YMR259C 4263 nt1.64□□□□□ -2.15
YAP1801P38856 YGL041C-BYGL041C-B 183 nt1.64□□□□□ -2.15
YAP1801P38856 YLR041WYLR041W 321 nt1.64□□□□□ -2.15
YAP1801P38856 snR190snR190 190 nt1.64□□□□□ -2.15
YAP1801P38856 RPL26BYGR034W 384 nt1.63□□□□□ -2.15
YAP1801P38856 YLR232WYLR232W 348 nt1.63□□□□□ -2.15
YAP1801P38856 SSK2YNR031C 4740 nt1.61□□□□□ -2.15
YAP1801P38856 APL3YBL037W 3078 nt1.61□□□□□ -2.15
YAP1801P38856 SEC3YER008C 4011 nt1.6□□□□□ -2.15
YAP1801P38856 SWI4YER111C 3282 nt1.6□□□□□ -2.15
YAP1801P38856 YGR130CYGR130C 2451 nt1.59□□□□□ -2.16
YAP1801P38856 AZF1YOR113W 2745 nt1.58□□□□□ -2.16
YAP1801P38856 YBR200W-AYBR200W-A 165 nt1.58□□□□□ -2.16
YAP1801P38856 ASE1YOR058C 2658 nt1.57□□□□□ -2.16
YAP1801P38856 tS(GCU)Q1tS(GCU)Q1 86 nt1.57□□□□□ -2.16
YAP1801P38856 PIK1YNL267W 3201 nt1.57□□□□□ -2.16
YAP1801P38856 IML1YJR138W 4755 nt1.56□□□□□ -2.16
YAP1801P38856 HUG1YML058W-A 207 nt1.56□□□□□ -2.16
YAP1801P38856 YJL127W-AYJL127W-A 117 nt1.55□□□□□ -2.16
YAP1801P38856 NUP188YML103C 4968 nt1.55□□□□□ -2.16
YAP1801P38856 NUP145YGL092W 3954 nt1.54□□□□□ -2.16
YAP1801P38856 YDR210WYDR210W 228 nt1.54□□□□□ -2.16
YAP1801P38856 YIL142C-AYIL142C-A 333 nt1.54□□□□□ -2.16
YAP1801P38856 RAD9YDR217C 3930 nt1.52□□□□□ -2.17
YAP1801P38856 KAP120YPL125W 3099 nt1.52□□□□□ -2.17
YAP1801P38856 CDC25YLR310C 4770 nt1.52□□□□□ -2.17
YAP1801P38856 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
YAP1801P38856 snR81snR81 201 nt1.5□□□□□ -2.17
YAP1801P38856 NST1YNL091W 3723 nt1.5□□□□□ -2.17
YAP1801P38856 YGR146C-AYGR146C-A 162 nt1.48□□□□□ -2.17
YAP1801P38856 SEC8YPR055W 3198 nt1.48□□□□□ -2.17
YAP1801P38856 YDL073WYDL073W 2955 nt1.47□□□□□ -2.17
YAP1801P38856 PRP16YKR086W 3216 nt1.47□□□□□ -2.17
YAP1801P38856 BIR1YJR089W 2865 nt1.47□□□□□ -2.17
YAP1801P38856 BEM3YPL115C 3387 nt1.45□□□□□ -2.18
YAP1801P38856 snR45snR45 172 nt1.45□□□□□ -2.18
YAP1801P38856 YPR117WYPR117W 7470 nt1.44□□□□□ -2.18
YAP1801P38856 SEC1YDR164C 2175 nt1.44□□□□□ -2.18
YAP1801P38856 PET127YOR017W 2403 nt1.44□□□□□ -2.18
YAP1801P38856 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
YAP1801P38856 YLL066W-BYLL066W-B 171 nt1.44□□□□□ -2.18
YAP1801P38856 YNL266WYNL266W 420 nt1.44□□□□□ -2.18
YAP1801P38856 CDC39YCR093W 6327 nt1.43□□□□□ -2.18
YAP1801P38856 tH(GUG)E1tH(GUG)E1 72 nt1.42□□□□□ -2.18
YAP1801P38856 tH(GUG)E2tH(GUG)E2 72 nt1.42□□□□□ -2.18
YAP1801P38856 tH(GUG)G1tH(GUG)G1 72 nt1.42□□□□□ -2.18
YAP1801P38856 tH(GUG)G2tH(GUG)G2 72 nt1.42□□□□□ -2.18
YAP1801P38856 tH(GUG)HtH(GUG)H 72 nt1.42□□□□□ -2.18
YAP1801P38856 tH(GUG)KtH(GUG)K 72 nt1.42□□□□□ -2.18
YAP1801P38856 tH(GUG)MtH(GUG)M 72 nt1.42□□□□□ -2.18
YAP1801P38856 YLR399W-AYLR399W-A 105 nt1.42□□□□□ -2.18
YAP1801P38856 FYV8YGR196C 2454 nt1.42□□□□□ -2.18
YAP1801P38856 tN(GUU)QtN(GUU)Q 71 nt1.41□□□□□ -2.18
YAP1801P38856 YBR072C-AYBR072C-A 162 nt1.4□□□□□ -2.19
YAP1801P38856 YPR160W-AYPR160W-A 81 nt1.4□□□□□ -2.19
YAP1801P38856 RPM2YML091C 3609 nt1.38□□□□□ -2.19
YAP1801P38856 YAL037C-AYAL037C-A 93 nt1.37□□□□□ -2.19
YAP1801P38856 UBP3YER151C 2739 nt1.36□□□□□ -2.19
YAP1801P38856 YSP1YHR155W 3687 nt1.34□□□□□ -2.19
YAP1801P38856 tV(UAC)BtV(UAC)B 74 nt1.33□□□□□ -2.2
YAP1801P38856 tV(UAC)DtV(UAC)D 74 nt1.33□□□□□ -2.2
YAP1801P38856 YNL284C-BYNL284C-B 5268 nt1.33□□□□□ -2.2
YAP1801P38856 MYO1YHR023W 5787 nt1.32□□□□□ -2.2
YAP1801P38856 SIP4YJL089W 2490 nt1.31□□□□□ -2.2
YAP1801P38856 NNF2YGR089W 2811 nt1.31□□□□□ -2.2
YAP1801P38856 YBL071C-BYBL071C-B 99 nt1.31□□□□□ -2.2
YAP1801P38856 snR62snR62 100 nt1.3□□□□□ -2.2
YAP1801P38856 YOL083C-AYOL083C-A 141 nt1.3□□□□□ -2.2
YAP1801P38856 YPL060C-AYPL060C-A 3315 nt1.3□□□□□ -2.2
YAP1801P38856 GLG1YKR058W 1851 nt1.29□□□□□ -2.2
YAP1801P38856 YBR196C-AYBR196C-A 150 nt1.28□□□□□ -2.2
YAP1801P38856 RPS26AYGL189C 360 nt1.27□□□□□ -2.21
YAP1801P38856 ULP2YIL031W 3105 nt1.26□□□□□ -2.21
YAP1801P38856 SEC10YLR166C 2616 nt1.25□□□□□ -2.21
YAP1801P38856 SPT7YBR081C 3999 nt1.25□□□□□ -2.21
YAP1801P38856 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
YAP1801P38856 SCC2YDR180W 4482 nt1.18□□□□□ -2.22
YAP1801P38856 UTP20YBL004W 7482 nt1.17□□□□□ -2.22
YAP1801P38856 YLL006W-AYLL006W-A 177 nt1.16□□□□□ -2.22
YAP1801P38856 YLR286W-AYLR286W-A 135 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms