Protein–RNA interactions for Protein: P38779

CIC1, Proteasome-interacting protein CIC1, yeastyeast

Known RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIC1P38779 ROM2YLR371W 4071 nt1.81□□□□□ -2.12
CIC1P38779 CDC25YLR310C 4770 nt1.81□□□□□ -2.12
CIC1P38779 snR61snR61 90 nt1.8□□□□□ -2.12
CIC1P38779 NUP188YML103C 4968 nt1.8□□□□□ -2.12
CIC1P38779 NUP145YGL092W 3954 nt1.8□□□□□ -2.12
CIC1P38779 STF2YGR008C 255 nt1.79□□□□□ -2.12
CIC1P38779 YBR200W-AYBR200W-A 165 nt1.79□□□□□ -2.12
CIC1P38779 VPS15YBR097W 4365 nt1.78□□□□□ -2.12
CIC1P38779 GEA2YEL022W 4380 nt1.77□□□□□ -2.13
CIC1P38779 YLR232WYLR232W 348 nt1.77□□□□□ -2.13
CIC1P38779 RAD9YDR217C 3930 nt1.76□□□□□ -2.13
CIC1P38779 COG6YNL041C 2520 nt1.76□□□□□ -2.13
CIC1P38779 YHR217CYHR217C 462 nt1.76□□□□□ -2.13
CIC1P38779 MEC1YBR136W 7107 nt1.75□□□□□ -2.13
CIC1P38779 EST2YLR318W 2655 nt1.74□□□□□ -2.13
CIC1P38779 tM(CAU)Q2tM(CAU)Q2 78 nt1.74□□□□□ -2.13
CIC1P38779 RPM2YML091C 3609 nt1.74□□□□□ -2.13
CIC1P38779 CDC39YCR093W 6327 nt1.73□□□□□ -2.13
CIC1P38779 BRR2YER172C 6492 nt1.73□□□□□ -2.13
CIC1P38779 AZF1YOR113W 2745 nt1.73□□□□□ -2.13
CIC1P38779 CAT8YMR280C 4302 nt1.73□□□□□ -2.13
CIC1P38779 ANS1YHR126C 480 nt1.72□□□□□ -2.13
CIC1P38779 CHS1YNL192W 3396 nt1.72□□□□□ -2.13
CIC1P38779 KAP120YPL125W 3099 nt1.71□□□□□ -2.14
CIC1P38779 YDR210WYDR210W 228 nt1.69□□□□□ -2.14
CIC1P38779 PIK1YNL267W 3201 nt1.68□□□□□ -2.14
CIC1P38779 PRP16YKR086W 3216 nt1.68□□□□□ -2.14
CIC1P38779 SBH1YER087C-B 249 nt1.68□□□□□ -2.14
CIC1P38779 RCO1YMR075W 2055 nt1.68□□□□□ -2.14
CIC1P38779 MSN5YDR335W 3675 nt1.68□□□□□ -2.14
CIC1P38779 SEC8YPR055W 3198 nt1.67□□□□□ -2.14
CIC1P38779 REV3YPL167C 4515 nt1.67□□□□□ -2.14
CIC1P38779 CLU1YMR012W 3834 nt1.67□□□□□ -2.14
CIC1P38779 DNF3YMR162C 4971 nt1.66□□□□□ -2.14
CIC1P38779 NUP192YJL039C 5052 nt1.66□□□□□ -2.14
CIC1P38779 YDL073WYDL073W 2955 nt1.65□□□□□ -2.14
CIC1P38779 SSK2YNR031C 4740 nt1.65□□□□□ -2.15
CIC1P38779 SXM1YDR395W 2835 nt1.63□□□□□ -2.15
CIC1P38779 tQ(UUG)E2tQ(UUG)E2 72 nt1.63□□□□□ -2.15
CIC1P38779 YJL127W-AYJL127W-A 117 nt1.63□□□□□ -2.15
CIC1P38779 YGR146C-AYGR146C-A 162 nt1.62□□□□□ -2.15
CIC1P38779 SEC1YDR164C 2175 nt1.61□□□□□ -2.15
CIC1P38779 YGL041C-BYGL041C-B 183 nt1.61□□□□□ -2.15
CIC1P38779 YLR399W-AYLR399W-A 105 nt1.61□□□□□ -2.15
CIC1P38779 YPR160W-AYPR160W-A 81 nt1.61□□□□□ -2.15
CIC1P38779 tN(GUU)QtN(GUU)Q 71 nt1.6□□□□□ -2.15
CIC1P38779 CCH1YGR217W 6120 nt1.6□□□□□ -2.15
CIC1P38779 BIR1YJR089W 2865 nt1.59□□□□□ -2.16
CIC1P38779 PET127YOR017W 2403 nt1.58□□□□□ -2.16
CIC1P38779 FYV8YGR196C 2454 nt1.58□□□□□ -2.16
CIC1P38779 SPC110YDR356W 2835 nt1.57□□□□□ -2.16
CIC1P38779 YDL247W-AYDL247W-A 75 nt1.57□□□□□ -2.16
CIC1P38779 YSP1YHR155W 3687 nt1.52□□□□□ -2.17
CIC1P38779 tH(GUG)E1tH(GUG)E1 72 nt1.51□□□□□ -2.17
CIC1P38779 tH(GUG)E2tH(GUG)E2 72 nt1.51□□□□□ -2.17
CIC1P38779 tH(GUG)G1tH(GUG)G1 72 nt1.51□□□□□ -2.17
CIC1P38779 tH(GUG)G2tH(GUG)G2 72 nt1.51□□□□□ -2.17
CIC1P38779 tH(GUG)HtH(GUG)H 72 nt1.51□□□□□ -2.17
CIC1P38779 tH(GUG)KtH(GUG)K 72 nt1.51□□□□□ -2.17
CIC1P38779 tH(GUG)MtH(GUG)M 72 nt1.51□□□□□ -2.17
CIC1P38779 YNL266WYNL266W 420 nt1.51□□□□□ -2.17
CIC1P38779 MSH3YCR092C 3057 nt1.51□□□□□ -2.17
CIC1P38779 BEM3YPL115C 3387 nt1.5□□□□□ -2.17
CIC1P38779 YBR072C-AYBR072C-A 162 nt1.47□□□□□ -2.17
CIC1P38779 HKR1YDR420W 5409 nt1.47□□□□□ -2.17
CIC1P38779 ULP2YIL031W 3105 nt1.46□□□□□ -2.18
CIC1P38779 NNF2YGR089W 2811 nt1.44□□□□□ -2.18
CIC1P38779 snR81snR81 201 nt1.44□□□□□ -2.18
CIC1P38779 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
CIC1P38779 UBP3YER151C 2739 nt1.43□□□□□ -2.18
CIC1P38779 GLG1YKR058W 1851 nt1.42□□□□□ -2.18
CIC1P38779 tS(GCU)Q1tS(GCU)Q1 86 nt1.41□□□□□ -2.18
CIC1P38779 YAL037C-AYAL037C-A 93 nt1.4□□□□□ -2.19
CIC1P38779 YPL060C-AYPL060C-A 3315 nt1.4□□□□□ -2.19
CIC1P38779 YGR130CYGR130C 2451 nt1.39□□□□□ -2.19
CIC1P38779 FIG2YCR089W 4830 nt1.39□□□□□ -2.19
CIC1P38779 SPT7YBR081C 3999 nt1.39□□□□□ -2.19
CIC1P38779 SEC10YLR166C 2616 nt1.33□□□□□ -2.2
CIC1P38779 SIP4YJL089W 2490 nt1.31□□□□□ -2.2
CIC1P38779 YNL284C-BYNL284C-B 5268 nt1.3□□□□□ -2.2
CIC1P38779 YIL142C-AYIL142C-A 333 nt1.3□□□□□ -2.2
CIC1P38779 YBR196C-AYBR196C-A 150 nt1.3□□□□□ -2.2
CIC1P38779 YLL006W-AYLL006W-A 177 nt1.28□□□□□ -2.2
CIC1P38779 IML1YJR138W 4755 nt1.28□□□□□ -2.2
CIC1P38779 YOL083C-AYOL083C-A 141 nt1.27□□□□□ -2.21
CIC1P38779 RKR1YMR247C 4689 nt1.27□□□□□ -2.21
CIC1P38779 tV(UAC)BtV(UAC)B 74 nt1.25□□□□□ -2.21
CIC1P38779 tV(UAC)DtV(UAC)D 74 nt1.25□□□□□ -2.21
CIC1P38779 YBL071C-BYBL071C-B 99 nt1.25□□□□□ -2.21
CIC1P38779 YPR117WYPR117W 7470 nt1.24□□□□□ -2.21
CIC1P38779 BUL2YML111W 2763 nt1.24□□□□□ -2.21
CIC1P38779 NST1YNL091W 3723 nt1.24□□□□□ -2.21
CIC1P38779 BEM2YER155C 6504 nt1.23□□□□□ -2.21
CIC1P38779 RPS26AYGL189C 360 nt1.22□□□□□ -2.21
CIC1P38779 YLL066W-BYLL066W-B 171 nt1.22□□□□□ -2.21
CIC1P38779 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
CIC1P38779 VAM6YDL077C 3150 nt1.21□□□□□ -2.22
CIC1P38779 EST1YLR233C 2100 nt1.21□□□□□ -2.22
CIC1P38779 CSE1YGL238W 2883 nt1.2□□□□□ -2.22
CIC1P38779 snR45snR45 172 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 229 ms