Protein–RNA interactions for Protein: P38624

PRE3, Proteasome subunit beta type-1, yeastyeast

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE3P38624 PRP8YHR165C 7242 nt2.39□□□□□ -2.03
PRE3P38624 PET309YLR067C 2898 nt2.39□□□□□ -2.03
PRE3P38624 DRS2YAL026C 4068 nt2.38□□□□□ -2.03
PRE3P38624 ULP2YIL031W 3105 nt2.38□□□□□ -2.03
PRE3P38624 KOG1YHR186C 4674 nt2.38□□□□□ -2.03
PRE3P38624 PRP16YKR086W 3216 nt2.38□□□□□ -2.03
PRE3P38624 RAD50YNL250W 3939 nt2.37□□□□□ -2.03
PRE3P38624 tN(GUU)QtN(GUU)Q 71 nt2.37□□□□□ -2.03
PRE3P38624 tV(UAC)QtV(UAC)Q 76 nt2.37□□□□□ -2.03
PRE3P38624 YPL060C-AYPL060C-A 3315 nt2.37□□□□□ -2.03
PRE3P38624 SEC7YDR170C 6030 nt2.37□□□□□ -2.03
PRE3P38624 PAU12YGR294W 363 nt2.35□□□□□ -2.03
PRE3P38624 NUM1YDR150W 8247 nt2.35□□□□□ -2.03
PRE3P38624 SGS1YMR190C 4344 nt2.34□□□□□ -2.03
PRE3P38624 IRA2YOL081W 9240 nt2.34□□□□□ -2.03
PRE3P38624 TUS1YLR425W 3924 nt2.33□□□□□ -2.04
PRE3P38624 YLR419WYLR419W 4308 nt2.33□□□□□ -2.04
PRE3P38624 STH1YIL126W 4080 nt2.33□□□□□ -2.04
PRE3P38624 UTP21YLR409C 2820 nt2.33□□□□□ -2.04
PRE3P38624 KIP1YBL063W 3336 nt2.33□□□□□ -2.04
PRE3P38624 YPL216WYPL216W 3309 nt2.33□□□□□ -2.04
PRE3P38624 GEA2YEL022W 4380 nt2.33□□□□□ -2.04
PRE3P38624 GEA1YJR031C 4227 nt2.32□□□□□ -2.04
PRE3P38624 GIP3YPL137C 3831 nt2.32□□□□□ -2.04
PRE3P38624 TOP2YNL088W 4287 nt2.32□□□□□ -2.04
PRE3P38624 HUG1YML058W-A 207 nt2.32□□□□□ -2.04
PRE3P38624 SEC8YPR055W 3198 nt2.32□□□□□ -2.04
PRE3P38624 ILS1YBL076C 3219 nt2.32□□□□□ -2.04
PRE3P38624 MSH6YDR097C 3729 nt2.31□□□□□ -2.04
PRE3P38624 DNF1YER166W 4716 nt2.3□□□□□ -2.04
PRE3P38624 BNR1YIL159W 4128 nt2.3□□□□□ -2.04
PRE3P38624 YSP1YHR155W 3687 nt2.3□□□□□ -2.04
PRE3P38624 BPH1YCR032W 6504 nt2.29□□□□□ -2.04
PRE3P38624 YJL077W-AYJL077W-A 87 nt2.29□□□□□ -2.04
PRE3P38624 PSD2YGR170W 3417 nt2.29□□□□□ -2.04
PRE3P38624 IRC20YLR247C 4671 nt2.28□□□□□ -2.04
PRE3P38624 YOR296WYOR296W 3870 nt2.28□□□□□ -2.04
PRE3P38624 tQ(UUG)QtQ(UUG)Q 76 nt2.26□□□□□ -2.05
PRE3P38624 FKS3YMR306W 5358 nt2.25□□□□□ -2.05
PRE3P38624 SSD1YDR293C 3753 nt2.25□□□□□ -2.05
PRE3P38624 MSB2YGR014W 3921 nt2.25□□□□□ -2.05
PRE3P38624 MSH3YCR092C 3057 nt2.25□□□□□ -2.05
PRE3P38624 RAV1YJR033C 4074 nt2.24□□□□□ -2.05
PRE3P38624 TDA9YML081W 3756 nt2.23□□□□□ -2.05
PRE3P38624 BCK1YJL095W 4437 nt2.23□□□□□ -2.05
PRE3P38624 snR70snR70 164 nt2.22□□□□□ -2.05
PRE3P38624 KRE33YNL132W 3171 nt2.21□□□□□ -2.06
PRE3P38624 KAP122YGL016W 3246 nt2.21□□□□□ -2.06
PRE3P38624 UTP22YGR090W 3714 nt2.2□□□□□ -2.06
PRE3P38624 YLR399W-AYLR399W-A 105 nt2.2□□□□□ -2.06
PRE3P38624 UBP2YOR124C 3819 nt2.2□□□□□ -2.06
PRE3P38624 FAR11YNL127W 2862 nt2.2□□□□□ -2.06
PRE3P38624 SEC3YER008C 4011 nt2.2□□□□□ -2.06
PRE3P38624 YLR422WYLR422W 5799 nt2.18□□□□□ -2.06
PRE3P38624 CAT8YMR280C 4302 nt2.18□□□□□ -2.06
PRE3P38624 FYV8YGR196C 2454 nt2.18□□□□□ -2.06
PRE3P38624 SMC4YLR086W 4257 nt2.18□□□□□ -2.06
PRE3P38624 PDR11YIL013C 4236 nt2.15□□□□□ -2.06
PRE3P38624 YER090C-AYER090C-A 90 nt2.15□□□□□ -2.07
PRE3P38624 DNA2YHR164C 4569 nt2.15□□□□□ -2.07
PRE3P38624 MSN5YDR335W 3675 nt2.15□□□□□ -2.07
PRE3P38624 YMR160WYMR160W 2451 nt2.14□□□□□ -2.07
PRE3P38624 YKL106C-AYKL106C-A 120 nt2.14□□□□□ -2.07
PRE3P38624 UBR2YLR024C 5619 nt2.14□□□□□ -2.07
PRE3P38624 BNI1YNL271C 5862 nt2.14□□□□□ -2.07
PRE3P38624 SPF1YEL031W 3648 nt2.12□□□□□ -2.07
PRE3P38624 AXL1YPR122W 3627 nt2.12□□□□□ -2.07
PRE3P38624 MYO4YAL029C 4416 nt2.12□□□□□ -2.07
PRE3P38624 tW(CCA)G1tW(CCA)G1 72 nt2.12□□□□□ -2.07
PRE3P38624 tW(CCA)G2tW(CCA)G2 72 nt2.12□□□□□ -2.07
PRE3P38624 tW(CCA)JtW(CCA)J 72 nt2.12□□□□□ -2.07
PRE3P38624 tW(CCA)KtW(CCA)K 72 nt2.12□□□□□ -2.07
PRE3P38624 tW(CCA)MtW(CCA)M 72 nt2.12□□□□□ -2.07
PRE3P38624 tW(CCA)PtW(CCA)P 72 nt2.12□□□□□ -2.07
PRE3P38624 NUP170YBL079W 4509 nt2.1□□□□□ -2.07
PRE3P38624 APL3YBL037W 3078 nt2.09□□□□□ -2.08
PRE3P38624 YNL054W-BYNL054W-B 5250 nt2.08□□□□□ -2.08
PRE3P38624 YHR180W-AYHR180W-A 183 nt2.08□□□□□ -2.08
PRE3P38624 SEC16YPL085W 6588 nt2.08□□□□□ -2.08
PRE3P38624 ATG9YDL149W 2994 nt2.06□□□□□ -2.08
PRE3P38624 TOR2YKL203C 7425 nt2.05□□□□□ -2.08
PRE3P38624 YCS4YLR272C 3531 nt2.04□□□□□ -2.08
PRE3P38624 CDC25YLR310C 4770 nt2.04□□□□□ -2.08
PRE3P38624 snR67snR67 82 nt2.04□□□□□ -2.08
PRE3P38624 ESL2YKR096W 3588 nt2.04□□□□□ -2.08
PRE3P38624 YOL098CYOL098C 3114 nt2.02□□□□□ -2.09
PRE3P38624 YLL006W-AYLL006W-A 177 nt2.02□□□□□ -2.09
PRE3P38624 REV3YPL167C 4515 nt2.01□□□□□ -2.09
PRE3P38624 HER1YOR227W 3741 nt2□□□□□ -2.09
PRE3P38624 NUP192YJL039C 5052 nt1.97□□□□□ -2.09
PRE3P38624 YMR045CYMR045C 5268 nt1.96□□□□□ -2.1
PRE3P38624 SKI3YPR189W 4299 nt1.95□□□□□ -2.1
PRE3P38624 CLU1YMR012W 3834 nt1.93□□□□□ -2.1
PRE3P38624 MYO1YHR023W 5787 nt1.93□□□□□ -2.1
PRE3P38624 SWI4YER111C 3282 nt1.91□□□□□ -2.1
PRE3P38624 YHR214C-BYHR214C-B 5382 nt1.91□□□□□ -2.1
PRE3P38624 INO80YGL150C 4470 nt1.9□□□□□ -2.11
PRE3P38624 NEO1YIL048W 3456 nt1.89□□□□□ -2.11
PRE3P38624 VPS13YLL040C 9435 nt1.87□□□□□ -2.11
PRE3P38624 USO1YDL058W 5373 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 56.9 ms