Protein–RNA interactions for Protein: P38316

ATG12, Ubiquitin-like protein ATG12, yeast

Predictions only

Length 186 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	P38316	YOR161W-A	YOR161W-A	81 nt		0.65	□□□□□ -2.31
ATG12	P38316	NOP9	YJL010C	2001 nt		0.64	□□□□□ -2.31
ATG12	P38316	YIR030W-A	YIR030W-A	384 nt		0.64	□□□□□ -2.31
ATG12	P38316	YMR158W-B	YMR158W-B	321 nt		0.64	□□□□□ -2.31
ATG12	P38316	YPR159C-A	YPR159C-A	102 nt		0.64	□□□□□ -2.31
ATG12	P38316	COY1	YKL179C	2040 nt		0.64	□□□□□ -2.31
ATG12	P38316	ULP2	YIL031W	3105 nt		0.63	□□□□□ -2.31
ATG12	P38316	YOR072W-B	YOR072W-B	162 nt		0.63	□□□□□ -2.31
ATG12	P38316	YCR038W-A	YCR038W-A	126 nt		0.62	□□□□□ -2.31
ATG12	P38316	LTE1	YAL024C	4308 nt		0.61	□□□□□ -2.31
ATG12	P38316	YAL067W-A	YAL067W-A	228 nt		0.61	□□□□□ -2.31
ATG12	P38316	YPL044C	YPL044C	549 nt		0.61	□□□□□ -2.31
ATG12	P38316	YBR182C-A	YBR182C-A	195 nt		0.61	□□□□□ -2.31
ATG12	P38316	YKU70	YMR284W	1809 nt		0.61	□□□□□ -2.31
ATG12	P38316	BIR1	YJR089W	2865 nt		0.6	□□□□□ -2.31
ATG12	P38316	YCR018C-A	YCR018C-A	255 nt		0.6	□□□□□ -2.31
ATG12	P38316	YER053C-A	YER053C-A	114 nt		0.6	□□□□□ -2.31
ATG12	P38316	COX12	YLR038C	252 nt		0.6	□□□□□ -2.31
ATG12	P38316	PMP1	YCR024C-A	123 nt		0.59	□□□□□ -2.31
ATG12	P38316	YEL014C	YEL014C	306 nt		0.59	□□□□□ -2.31
ATG12	P38316	YNL097C-B	YNL097C-B	123 nt		0.59	□□□□□ -2.31
ATG12	P38316	FMP27	YLR454W	7887 nt		0.58	□□□□□ -2.32
ATG12	P38316	ULI1	YFR026C	510 nt		0.58	□□□□□ -2.32
ATG12	P38316	APQ12	YIL040W	417 nt		0.58	□□□□□ -2.32
ATG12	P38316	YMR272W-A	YMR272W-A	114 nt		0.58	□□□□□ -2.32
ATG12	P38316	tN(GUU)Q	tN(GUU)Q	71 nt		0.57	□□□□□ -2.32
ATG12	P38316	YLR282C	YLR282C	342 nt		0.57	□□□□□ -2.32
ATG12	P38316	JLP2	YMR132C	627 nt		0.57	□□□□□ -2.32
ATG12	P38316	snR190	snR190	190 nt		0.57	□□□□□ -2.32
ATG12	P38316	AI1	Q0050	2505 nt		0.57	□□□□□ -2.32
ATG12	P38316	YOR192C-B	YOR192C-B	5313 nt		0.57	□□□□□ -2.32
ATG12	P38316	YGL123C-A	YGL123C-A	231 nt		0.56	□□□□□ -2.32
ATG12	P38316	CHS6	YJL099W	2241 nt		0.56	□□□□□ -2.32
ATG12	P38316	TRS65	YGR166W	1683 nt		0.56	□□□□□ -2.32
ATG12	P38316	SPG3	YDR504C	384 nt		0.53	□□□□□ -2.32
ATG12	P38316	RPL26B	YGR034W	384 nt		0.53	□□□□□ -2.32
ATG12	P38316	PRP5	YBR237W	2550 nt		0.53	□□□□□ -2.32
ATG12	P38316	YML002W	YML002W	2214 nt		0.52	□□□□□ -2.33
ATG12	P38316	YJL182C	YJL182C	318 nt		0.52	□□□□□ -2.33
ATG12	P38316	FYV10	YIL097W	1551 nt		0.52	□□□□□ -2.33
ATG12	P38316	YPR160W-A	YPR160W-A	81 nt		0.51	□□□□□ -2.33
ATG12	P38316	YIL002W-A	YIL002W-A	210 nt		0.5	□□□□□ -2.33
ATG12	P38316	BLI1	YKL061W	342 nt		0.5	□□□□□ -2.33
ATG12	P38316	snR52	snR52	92 nt		0.5	□□□□□ -2.33
ATG12	P38316	IQG1	YPL242C	4488 nt		0.5	□□□□□ -2.33
ATG12	P38316	UTP10	YJL109C	5310 nt		0.5	□□□□□ -2.33
ATG12	P38316	YNL198C	YNL198C	303 nt		0.49	□□□□□ -2.33
ATG12	P38316	HAL9	YOL089C	3093 nt		0.48	□□□□□ -2.33
ATG12	P38316	YDR544C	YDR544C	429 nt		0.48	□□□□□ -2.33
ATG12	P38316	COX5B	YIL111W	456 nt		0.48	□□□□□ -2.33
ATG12	P38316	YJL150W	YJL150W	303 nt		0.48	□□□□□ -2.33
ATG12	P38316	PRP39	YML046W	1890 nt		0.48	□□□□□ -2.33
ATG12	P38316	SEC8	YPR055W	3198 nt		0.47	□□□□□ -2.33
ATG12	P38316	OST4	YDL232W	111 nt		0.46	□□□□□ -2.34
ATG12	P38316	PRP42	YDR235W	1635 nt		0.46	□□□□□ -2.34
ATG12	P38316	MLP1	YKR095W	5628 nt		0.45	□□□□□ -2.34
ATG12	P38316	YLR041W	YLR041W	321 nt		0.45	□□□□□ -2.34
ATG12	P38316	YJL127W-A	YJL127W-A	117 nt		0.44	□□□□□ -2.34
ATG12	P38316	snR46	snR46	197 nt		0.44	□□□□□ -2.34
ATG12	P38316	YNL054W-B	YNL054W-B	5250 nt		0.44	□□□□□ -2.34
ATG12	P38316	BEM3	YPL115C	3387 nt		0.43	□□□□□ -2.34
ATG12	P38316	TAH1	YCR060W	336 nt		0.43	□□□□□ -2.34
ATG12	P38316	YDR406W-A	YDR406W-A	246 nt		0.43	□□□□□ -2.34
ATG12	P38316	YBL053W	YBL053W	375 nt		0.43	□□□□□ -2.34
ATG12	P38316	YLR399W-A	YLR399W-A	105 nt		0.42	□□□□□ -2.34
ATG12	P38316	YBL039C-A	YBL039C-A	84 nt		0.42	□□□□□ -2.34
ATG12	P38316	SNU13	YEL026W	381 nt		0.41	□□□□□ -2.34
ATG12	P38316	YHR131W-A	YHR131W-A	246 nt		0.41	□□□□□ -2.34
ATG12	P38316	THO2	YNL139C	4794 nt		0.41	□□□□□ -2.34
ATG12	P38316	ORC3	YLL004W	1851 nt		0.41	□□□□□ -2.34
ATG12	P38316	PET111	YMR257C	2403 nt		0.4	□□□□□ -2.34
ATG12	P38316	YGL182C	YGL182C	324 nt		0.39	□□□□□ -2.35
ATG12	P38316	UTP8	YGR128C	2142 nt		0.38	□□□□□ -2.35
ATG12	P38316	YMR046W-A	YMR046W-A	129 nt		0.38	□□□□□ -2.35
ATG12	P38316	NNF2	YGR089W	2811 nt		0.37	□□□□□ -2.35
ATG12	P38316	YDR371C-A	YDR371C-A	105 nt		0.37	□□□□□ -2.35
ATG12	P38316	YKL100W-A	YKL100W-A	90 nt		0.37	□□□□□ -2.35
ATG12	P38316	YLR232W	YLR232W	348 nt		0.37	□□□□□ -2.35
ATG12	P38316	YOR381W-A	YOR381W-A	168 nt		0.37	□□□□□ -2.35
ATG12	P38316	BUL2	YML111W	2763 nt		0.36	□□□□□ -2.35
ATG12	P38316	SDH6	YDR379C-A	240 nt		0.36	□□□□□ -2.35
ATG12	P38316	SBH1	YER087C-B	249 nt		0.36	□□□□□ -2.35
ATG12	P38316	RPS26A	YGL189C	360 nt		0.36	□□□□□ -2.35
ATG12	P38316	YLL006W-A	YLL006W-A	177 nt		0.36	□□□□□ -2.35
ATG12	P38316	MLP2	YIL149C	5040 nt		0.35	□□□□□ -2.35
ATG12	P38316	YBR072C-A	YBR072C-A	162 nt		0.35	□□□□□ -2.35
ATG12	P38316	tM(CAU)Q1	tM(CAU)Q1	76 nt		0.34	□□□□□ -2.36
ATG12	P38316	YLR342W-A	YLR342W-A	174 nt		0.34	□□□□□ -2.36
ATG12	P38316	YLR466C-B	YLR466C-B	117 nt		0.34	□□□□□ -2.36
ATG12	P38316	snR39B	snR39B	96 nt		0.34	□□□□□ -2.36
ATG12	P38316	NIP1	YMR309C	2439 nt		0.33	□□□□□ -2.36
ATG12	P38316	YEL073C	YEL073C	324 nt		0.33	□□□□□ -2.36
ATG12	P38316	YNL338W	YNL338W	159 nt		0.33	□□□□□ -2.36
ATG12	P38316	COG6	YNL041C	2520 nt		0.32	□□□□□ -2.36
ATG12	P38316	YER078W-A	YER078W-A	165 nt		0.32	□□□□□ -2.36
ATG12	P38316	tL(UAA)Q	tL(UAA)Q	85 nt		0.32	□□□□□ -2.36
ATG12	P38316	YOR329W-A	YOR329W-A	210 nt		0.32	□□□□□ -2.36
ATG12	P38316	YSP1	YHR155W	3687 nt		0.31	□□□□□ -2.36
ATG12	P38316	YDR210W	YDR210W	228 nt		0.3	□□□□□ -2.36
ATG12	P38316	YGR151C	YGR151C	336 nt		0.3	□□□□□ -2.36

Retrieved 100 of 7,029 protein–RNA pairs in 31 ms