Protein–RNA interactions for Protein: P38241

ECM2, Pre-mRNA-splicing factor SLT11, yeastyeast

Known RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM2P38241 snR190snR190 190 nt1.88□□□□□ -2.11
ECM2P38241 REV3YPL167C 4515 nt1.87□□□□□ -2.11
ECM2P38241 WAR1YML076C 2835 nt1.86□□□□□ -2.11
ECM2P38241 tM(CAU)Q2tM(CAU)Q2 78 nt1.86□□□□□ -2.11
ECM2P38241 tS(GCU)Q1tS(GCU)Q1 86 nt1.86□□□□□ -2.11
ECM2P38241 YLR232WYLR232W 348 nt1.86□□□□□ -2.11
ECM2P38241 SEC21YNL287W 2808 nt1.85□□□□□ -2.11
ECM2P38241 PRP16YKR086W 3216 nt1.85□□□□□ -2.11
ECM2P38241 RPL26BYGR034W 384 nt1.84□□□□□ -2.11
ECM2P38241 YPL060C-AYPL060C-A 3315 nt1.83□□□□□ -2.12
ECM2P38241 CHS1YNL192W 3396 nt1.82□□□□□ -2.12
ECM2P38241 CLU1YMR012W 3834 nt1.82□□□□□ -2.12
ECM2P38241 MSH3YCR092C 3057 nt1.82□□□□□ -2.12
ECM2P38241 PKH3YDR466W 2697 nt1.82□□□□□ -2.12
ECM2P38241 BIR1YJR089W 2865 nt1.81□□□□□ -2.12
ECM2P38241 SMC1YFL008W 3678 nt1.8□□□□□ -2.12
ECM2P38241 snR81snR81 201 nt1.8□□□□□ -2.12
ECM2P38241 SEC1YDR164C 2175 nt1.79□□□□□ -2.12
ECM2P38241 NUP145YGL092W 3954 nt1.79□□□□□ -2.12
ECM2P38241 YGR146C-AYGR146C-A 162 nt1.79□□□□□ -2.12
ECM2P38241 YIL142C-AYIL142C-A 333 nt1.79□□□□□ -2.12
ECM2P38241 CFT1YDR301W 4074 nt1.79□□□□□ -2.12
ECM2P38241 CDC39YCR093W 6327 nt1.78□□□□□ -2.12
ECM2P38241 MEC1YBR136W 7107 nt1.77□□□□□ -2.13
ECM2P38241 YJL127W-AYJL127W-A 117 nt1.76□□□□□ -2.13
ECM2P38241 YBR200W-AYBR200W-A 165 nt1.75□□□□□ -2.13
ECM2P38241 BST1YFL025C 3090 nt1.75□□□□□ -2.13
ECM2P38241 NUP188YML103C 4968 nt1.74□□□□□ -2.13
ECM2P38241 BPH1YCR032W 6504 nt1.74□□□□□ -2.13
ECM2P38241 PMD1YER132C 5262 nt1.74□□□□□ -2.13
ECM2P38241 YNL266WYNL266W 420 nt1.74□□□□□ -2.13
ECM2P38241 MSN5YDR335W 3675 nt1.73□□□□□ -2.13
ECM2P38241 tT(UGU)HtT(UGU)H 72 nt1.73□□□□□ -2.13
ECM2P38241 YAL037C-AYAL037C-A 93 nt1.73□□□□□ -2.13
ECM2P38241 YBR072C-AYBR072C-A 162 nt1.73□□□□□ -2.13
ECM2P38241 SEC8YPR055W 3198 nt1.73□□□□□ -2.13
ECM2P38241 IRC20YLR247C 4671 nt1.72□□□□□ -2.13
ECM2P38241 EST2YLR318W 2655 nt1.7□□□□□ -2.14
ECM2P38241 BRR2YER172C 6492 nt1.7□□□□□ -2.14
ECM2P38241 YMR247W-AYMR247W-A 144 nt1.7□□□□□ -2.14
ECM2P38241 YOR093CYOR093C 4947 nt1.7□□□□□ -2.14
ECM2P38241 DNF3YMR162C 4971 nt1.68□□□□□ -2.14
ECM2P38241 YPR160W-AYPR160W-A 81 nt1.68□□□□□ -2.14
ECM2P38241 YLL066W-BYLL066W-B 171 nt1.67□□□□□ -2.14
ECM2P38241 YLR399W-AYLR399W-A 105 nt1.67□□□□□ -2.14
ECM2P38241 GEA2YEL022W 4380 nt1.66□□□□□ -2.14
ECM2P38241 snR45snR45 172 nt1.66□□□□□ -2.14
ECM2P38241 NUP192YJL039C 5052 nt1.66□□□□□ -2.14
ECM2P38241 VPS15YBR097W 4365 nt1.66□□□□□ -2.14
ECM2P38241 tN(GUU)QtN(GUU)Q 71 nt1.65□□□□□ -2.15
ECM2P38241 IRA1YBR140C 9279 nt1.65□□□□□ -2.15
ECM2P38241 NNF2YGR089W 2811 nt1.65□□□□□ -2.15
ECM2P38241 AZF1YOR113W 2745 nt1.64□□□□□ -2.15
ECM2P38241 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
ECM2P38241 SXM1YDR395W 2835 nt1.63□□□□□ -2.15
ECM2P38241 YSP1YHR155W 3687 nt1.61□□□□□ -2.15
ECM2P38241 snR62snR62 100 nt1.6□□□□□ -2.15
ECM2P38241 ULP2YIL031W 3105 nt1.6□□□□□ -2.15
ECM2P38241 YBL071C-BYBL071C-B 99 nt1.57□□□□□ -2.16
ECM2P38241 SPC110YDR356W 2835 nt1.56□□□□□ -2.16
ECM2P38241 UBP3YER151C 2739 nt1.56□□□□□ -2.16
ECM2P38241 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
ECM2P38241 RPS26AYGL189C 360 nt1.54□□□□□ -2.16
ECM2P38241 tQ(UUG)E2tQ(UUG)E2 72 nt1.54□□□□□ -2.16
ECM2P38241 YOL083C-AYOL083C-A 141 nt1.53□□□□□ -2.16
ECM2P38241 NST1YNL091W 3723 nt1.53□□□□□ -2.17
ECM2P38241 GLG1YKR058W 1851 nt1.52□□□□□ -2.17
ECM2P38241 SEC10YLR166C 2616 nt1.52□□□□□ -2.17
ECM2P38241 YBR196C-AYBR196C-A 150 nt1.51□□□□□ -2.17
ECM2P38241 LAA1YJL207C 6045 nt1.5□□□□□ -2.17
ECM2P38241 PIK1YNL267W 3201 nt1.49□□□□□ -2.17
ECM2P38241 PET127YOR017W 2403 nt1.48□□□□□ -2.17
ECM2P38241 BEM3YPL115C 3387 nt1.48□□□□□ -2.17
ECM2P38241 ANS1YHR126C 480 nt1.47□□□□□ -2.17
ECM2P38241 FIG2YCR089W 4830 nt1.47□□□□□ -2.17
ECM2P38241 SSK2YNR031C 4740 nt1.45□□□□□ -2.18
ECM2P38241 HKR1YDR420W 5409 nt1.41□□□□□ -2.18
ECM2P38241 YGR130CYGR130C 2451 nt1.41□□□□□ -2.18
ECM2P38241 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
ECM2P38241 YLR286W-AYLR286W-A 135 nt1.4□□□□□ -2.19
ECM2P38241 YOL164W-AYOL164W-A 183 nt1.4□□□□□ -2.19
ECM2P38241 BUL2YML111W 2763 nt1.39□□□□□ -2.19
ECM2P38241 SPT7YBR081C 3999 nt1.39□□□□□ -2.19
ECM2P38241 YPR117WYPR117W 7470 nt1.39□□□□□ -2.19
ECM2P38241 tD(GUC)QtD(GUC)Q 75 nt1.35□□□□□ -2.19
ECM2P38241 EST1YLR233C 2100 nt1.34□□□□□ -2.19
ECM2P38241 snR69snR69 101 nt1.34□□□□□ -2.19
ECM2P38241 YGR240C-AYGR240C-A 201 nt1.34□□□□□ -2.19
ECM2P38241 YDR034C-AYDR034C-A 177 nt1.33□□□□□ -2.2
ECM2P38241 CSE1YGL238W 2883 nt1.33□□□□□ -2.2
ECM2P38241 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
ECM2P38241 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
ECM2P38241 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
ECM2P38241 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
ECM2P38241 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
ECM2P38241 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
ECM2P38241 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
ECM2P38241 YBL100W-CYBL100W-C 120 nt1.31□□□□□ -2.2
ECM2P38241 YNL284C-BYNL284C-B 5268 nt1.31□□□□□ -2.2
ECM2P38241 IML1YJR138W 4755 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 55.2 ms