Protein–RNA interactions for Protein: P36026

UBP11, Ubiquitin carboxyl-terminal hydrolase 11, yeastyeast

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP11P36026 YGL123C-AYGL123C-A 231 nt0.9□□□□□ -2.27
UBP11P36026 UBP3YER151C 2739 nt0.9□□□□□ -2.27
UBP11P36026 YOR302WYOR302W 78 nt0.89□□□□□ -2.27
UBP11P36026 RKR1YMR247C 4689 nt0.89□□□□□ -2.27
UBP11P36026 COY1YKL179C 2040 nt0.89□□□□□ -2.27
UBP11P36026 YLR041WYLR041W 321 nt0.88□□□□□ -2.27
UBP11P36026 RPM2YML091C 3609 nt0.88□□□□□ -2.27
UBP11P36026 BEM3YPL115C 3387 nt0.87□□□□□ -2.27
UBP11P36026 ULI1YFR026C 510 nt0.87□□□□□ -2.27
UBP11P36026 YIL134C-AYIL134C-A 204 nt0.87□□□□□ -2.27
UBP11P36026 YML002WYML002W 2214 nt0.87□□□□□ -2.27
UBP11P36026 UTP20YBL004W 7482 nt0.85□□□□□ -2.27
UBP11P36026 PRP5YBR237W 2550 nt0.85□□□□□ -2.27
UBP11P36026 YIL002W-AYIL002W-A 210 nt0.85□□□□□ -2.27
UBP11P36026 YNL097C-BYNL097C-B 123 nt0.85□□□□□ -2.27
UBP11P36026 YOR161W-AYOR161W-A 81 nt0.85□□□□□ -2.27
UBP11P36026 APQ12YIL040W 417 nt0.84□□□□□ -2.27
UBP11P36026 YOL014WYOL014W 375 nt0.84□□□□□ -2.27
UBP11P36026 YOR345CYOR345C 351 nt0.84□□□□□ -2.27
UBP11P36026 FYV10YIL097W 1551 nt0.83□□□□□ -2.28
UBP11P36026 CHS6YJL099W 2241 nt0.83□□□□□ -2.28
UBP11P36026 SPG3YDR504C 384 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)BtT(AGU)B 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)CtT(AGU)C 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)DtT(AGU)D 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)HtT(AGU)H 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)I1tT(AGU)I1 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)I2tT(AGU)I2 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)JtT(AGU)J 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)N1tT(AGU)N1 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)N2tT(AGU)N2 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)O1tT(AGU)O1 73 nt0.82□□□□□ -2.28
UBP11P36026 tT(AGU)O2tT(AGU)O2 73 nt0.82□□□□□ -2.28
UBP11P36026 YMR158W-BYMR158W-B 321 nt0.81□□□□□ -2.28
UBP11P36026 IQG1YPL242C 4488 nt0.81□□□□□ -2.28
UBP11P36026 YMR046W-AYMR046W-A 129 nt0.8□□□□□ -2.28
UBP11P36026 YMR160WYMR160W 2451 nt0.8□□□□□ -2.28
UBP11P36026 YER053C-AYER053C-A 114 nt0.79□□□□□ -2.28
UBP11P36026 YBR131C-AYBR131C-A 90 nt0.79□□□□□ -2.28
UBP11P36026 YCR038W-AYCR038W-A 126 nt0.78□□□□□ -2.28
UBP11P36026 OST4YDL232W 111 nt0.78□□□□□ -2.28
UBP11P36026 SEC1YDR164C 2175 nt0.78□□□□□ -2.28
UBP11P36026 tM(CAU)Q1tM(CAU)Q1 76 nt0.77□□□□□ -2.29
UBP11P36026 PRP42YDR235W 1635 nt0.77□□□□□ -2.29
UBP11P36026 YKL145W-AYKL145W-A 93 nt0.76□□□□□ -2.29
UBP11P36026 YHR131W-AYHR131W-A 246 nt0.75□□□□□ -2.29
UBP11P36026 tN(GUU)QtN(GUU)Q 71 nt0.74□□□□□ -2.29
UBP11P36026 snR46snR46 197 nt0.74□□□□□ -2.29
UBP11P36026 TRS65YGR166W 1683 nt0.74□□□□□ -2.29
UBP11P36026 JLP2YMR132C 627 nt0.73□□□□□ -2.29
UBP11P36026 PRP39YML046W 1890 nt0.72□□□□□ -2.29
UBP11P36026 YJL127W-AYJL127W-A 117 nt0.72□□□□□ -2.29
UBP11P36026 YDR406W-AYDR406W-A 246 nt0.71□□□□□ -2.3
UBP11P36026 YEL014CYEL014C 306 nt0.71□□□□□ -2.3
UBP11P36026 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
UBP11P36026 UTP8YGR128C 2142 nt0.7□□□□□ -2.3
UBP11P36026 SNU13YEL026W 381 nt0.69□□□□□ -2.3
UBP11P36026 MLP1YKR095W 5628 nt0.68□□□□□ -2.3
UBP11P36026 YJL182CYJL182C 318 nt0.67□□□□□ -2.3
UBP11P36026 YLR232WYLR232W 348 nt0.66□□□□□ -2.3
UBP11P36026 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
UBP11P36026 FMP27YLR454W 7887 nt0.65□□□□□ -2.31
UBP11P36026 ULP2YIL031W 3105 nt0.64□□□□□ -2.31
UBP11P36026 YEL073CYEL073C 324 nt0.64□□□□□ -2.31
UBP11P36026 NNF2YGR089W 2811 nt0.63□□□□□ -2.31
UBP11P36026 PET111YMR257C 2403 nt0.62□□□□□ -2.31
UBP11P36026 TAH1YCR060W 336 nt0.61□□□□□ -2.31
UBP11P36026 YBL039C-AYBL039C-A 84 nt0.61□□□□□ -2.31
UBP11P36026 MLP2YIL149C 5040 nt0.6□□□□□ -2.31
UBP11P36026 YGL182CYGL182C 324 nt0.6□□□□□ -2.31
UBP11P36026 YLR342W-AYLR342W-A 174 nt0.6□□□□□ -2.31
UBP11P36026 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
UBP11P36026 BUL2YML111W 2763 nt0.6□□□□□ -2.31
UBP11P36026 BIR1YJR089W 2865 nt0.59□□□□□ -2.32
UBP11P36026 YOR192C-BYOR192C-B 5313 nt0.57□□□□□ -2.32
UBP11P36026 NIP1YMR309C 2439 nt0.57□□□□□ -2.32
UBP11P36026 YLL006W-AYLL006W-A 177 nt0.56□□□□□ -2.32
UBP11P36026 YOR170WYOR170W 306 nt0.56□□□□□ -2.32
UBP11P36026 snR52snR52 92 nt0.56□□□□□ -2.32
UBP11P36026 GLG1YKR058W 1851 nt0.56□□□□□ -2.32
UBP11P36026 YBR072C-AYBR072C-A 162 nt0.55□□□□□ -2.32
UBP11P36026 YOR381W-AYOR381W-A 168 nt0.54□□□□□ -2.32
UBP11P36026 AI1Q0050 2505 nt0.54□□□□□ -2.32
UBP11P36026 RPS26AYGL189C 360 nt0.53□□□□□ -2.32
UBP11P36026 YPL060C-AYPL060C-A 3315 nt0.52□□□□□ -2.33
UBP11P36026 YDR371C-AYDR371C-A 105 nt0.51□□□□□ -2.33
UBP11P36026 SBH1YER087C-B 249 nt0.51□□□□□ -2.33
UBP11P36026 YJL150WYJL150W 303 nt0.51□□□□□ -2.33
UBP11P36026 COG6YNL041C 2520 nt0.5□□□□□ -2.33
UBP11P36026 YOR314W-AYOR314W-A 111 nt0.5□□□□□ -2.33
UBP11P36026 snR48snR48 113 nt0.49□□□□□ -2.33
UBP11P36026 SDH6YDR379C-A 240 nt0.48□□□□□ -2.33
UBP11P36026 YDR544CYDR544C 429 nt0.46□□□□□ -2.34
UBP11P36026 YNL054W-BYNL054W-B 5250 nt0.46□□□□□ -2.34
UBP11P36026 YNL337WYNL337W 255 nt0.45□□□□□ -2.34
UBP11P36026 YBL100W-BYBL100W-B 5313 nt0.44□□□□□ -2.34
UBP11P36026 RCO1YMR075W 2055 nt0.44□□□□□ -2.34
UBP11P36026 ORC3YLL004W 1851 nt0.42□□□□□ -2.34
UBP11P36026 ESP1YGR098C 4893 nt0.39□□□□□ -2.35
UBP11P36026 YER078W-AYER078W-A 165 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 39.5 ms