Protein–RNA interactions for Protein: P35207

SKI2, Antiviral helicase SKI2, yeastyeast

Known RBP RIP-Chip data

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI2P35207 YMR193C-AYMR193C-A 387 nt0.32□□□□□ -2.36
SKI2P35207 HTL1YCR020W-B 237 nt0.31□□□□□ -2.36
SKI2P35207 CSE2YNR010W 450 nt0.31□□□□□ -2.36
SKI2P35207 ORC3YLL004W 1851 nt0.31□□□□□ -2.36
SKI2P35207 YDR413CYDR413C 576 nt0.3□□□□□ -2.36
SKI2P35207 YFL063WYFL063W 456 nt0.3□□□□□ -2.36
SKI2P35207 YHR175W-AYHR175W-A 150 nt0.3□□□□□ -2.36
SKI2P35207 YKL136WYKL136W 399 nt0.3□□□□□ -2.36
SKI2P35207 YLR282CYLR282C 342 nt0.3□□□□□ -2.36
SKI2P35207 YPL038W-AYPL038W-A 192 nt0.3□□□□□ -2.36
SKI2P35207 snR45snR45 172 nt0.3□□□□□ -2.36
SKI2P35207 PRP42YDR235W 1635 nt0.3□□□□□ -2.36
SKI2P35207 HMRA1YCR097W 381 nt0.29□□□□□ -2.36
SKI2P35207 snR74snR74 88 nt0.29□□□□□ -2.36
SKI2P35207 YDL240C-AYDL240C-A 138 nt0.29□□□□□ -2.36
SKI2P35207 YGR069WYGR069W 336 nt0.29□□□□□ -2.36
SKI2P35207 YNR077CYNR077C 255 nt0.29□□□□□ -2.36
SKI2P35207 snR56snR56 88 nt0.28□□□□□ -2.36
SKI2P35207 YCR022CYCR022C 345 nt0.28□□□□□ -2.36
SKI2P35207 YER097WYER097W 330 nt0.28□□□□□ -2.36
SKI2P35207 YDR183C-AYDR183C-A 258 nt0.27□□□□□ -2.37
SKI2P35207 ATP6Q0085 780 nt0.27□□□□□ -2.37
SKI2P35207 YGL149WYGL149W 306 nt0.27□□□□□ -2.37
SKI2P35207 tR(ACG)Q2tR(ACG)Q2 74 nt0.27□□□□□ -2.37
SKI2P35207 YMR307C-AYMR307C-A 195 nt0.27□□□□□ -2.37
SKI2P35207 YDR371C-AYDR371C-A 105 nt0.26□□□□□ -2.37
SKI2P35207 YJL197C-AYJL197C-A 282 nt0.26□□□□□ -2.37
SKI2P35207 RAD61YDR014W 1944 nt0.26□□□□□ -2.37
SKI2P35207 YGL123C-AYGL123C-A 231 nt0.25□□□□□ -2.37
SKI2P35207 YLR120W-AYLR120W-A 102 nt0.25□□□□□ -2.37
SKI2P35207 YBL100W-BYBL100W-B 5313 nt0.24□□□□□ -2.37
SKI2P35207 YER053C-AYER053C-A 114 nt0.24□□□□□ -2.37
SKI2P35207 RPS26AYGL189C 360 nt0.24□□□□□ -2.37
SKI2P35207 YKL118WYKL118W 312 nt0.24□□□□□ -2.37
SKI2P35207 YNL028WYNL028W 318 nt0.24□□□□□ -2.37
SKI2P35207 YPR010C-AYPR010C-A 219 nt0.24□□□□□ -2.37
SKI2P35207 YEL020C-BYEL020C-B 198 nt0.22□□□□□ -2.37
SKI2P35207 YCR038W-AYCR038W-A 126 nt0.21□□□□□ -2.38
SKI2P35207 TFB5YDR079C-A 219 nt0.21□□□□□ -2.38
SKI2P35207 YGL052WYGL052W 306 nt0.21□□□□□ -2.38
SKI2P35207 COX12YLR038C 252 nt0.21□□□□□ -2.38
SKI2P35207 YNL146WYNL146W 303 nt0.21□□□□□ -2.38
SKI2P35207 YMR172C-AYMR172C-A 384 nt0.2□□□□□ -2.38
SKI2P35207 RCO1YMR075W 2055 nt0.2□□□□□ -2.38
SKI2P35207 BLI1YKL061W 342 nt0.19□□□□□ -2.38
SKI2P35207 YOL013W-AYOL013W-A 192 nt0.19□□□□□ -2.38
SKI2P35207 YOR072W-BYOR072W-B 162 nt0.19□□□□□ -2.38
SKI2P35207 YLL006W-AYLL006W-A 177 nt0.17□□□□□ -2.38
SKI2P35207 NIP1YMR309C 2439 nt0.17□□□□□ -2.38
SKI2P35207 SNU13YEL026W 381 nt0.16□□□□□ -2.38
SKI2P35207 YHR131W-AYHR131W-A 246 nt0.16□□□□□ -2.38
SKI2P35207 YLR041WYLR041W 321 nt0.16□□□□□ -2.38
SKI2P35207 YNL277W-AYNL277W-A 189 nt0.16□□□□□ -2.38
SKI2P35207 YDR366CYDR366C 399 nt0.14□□□□□ -2.39
SKI2P35207 YDR544CYDR544C 429 nt0.13□□□□□ -2.39
SKI2P35207 YEL073CYEL073C 324 nt0.13□□□□□ -2.39
SKI2P35207 YOR186C-AYOR186C-A 210 nt0.13□□□□□ -2.39
SKI2P35207 YGR164WYGR164W 336 nt0.12□□□□□ -2.39
SKI2P35207 snR46snR46 197 nt0.12□□□□□ -2.39
SKI2P35207 APQ12YIL040W 417 nt0.11□□□□□ -2.39
SKI2P35207 RPL39YJL189W 156 nt0.11□□□□□ -2.39
SKI2P35207 YDR524W-CYDR524W-C 90 nt0.1□□□□□ -2.39
SKI2P35207 YGL041CYGL041C 204 nt0.1□□□□□ -2.39
SKI2P35207 YIL002W-AYIL002W-A 210 nt0.1□□□□□ -2.39
SKI2P35207 YBR072C-AYBR072C-A 162 nt0.1□□□□□ -2.39
SKI2P35207 YBR131C-AYBR131C-A 90 nt0.1□□□□□ -2.39
SKI2P35207 YIR030W-AYIR030W-A 384 nt0.09□□□□□ -2.4
SKI2P35207 SDH6YDR379C-A 240 nt0.07□□□□□ -2.4
SKI2P35207 tF(GAA)QtF(GAA)Q 75 nt0.07□□□□□ -2.4
SKI2P35207 YOR008C-AYOR008C-A 225 nt0.07□□□□□ -2.4
SKI2P35207 YKU70YMR284W 1809 nt0.07□□□□□ -2.4
SKI2P35207 YKL100W-AYKL100W-A 90 nt0.06□□□□□ -2.4
SKI2P35207 YEL014CYEL014C 306 nt0.05□□□□□ -2.4
SKI2P35207 YMR158W-BYMR158W-B 321 nt0.05□□□□□ -2.4
SKI2P35207 YBR182C-AYBR182C-A 195 nt0.04□□□□□ -2.4
SKI2P35207 SOV1YMR066W 2697 nt0.04□□□□□ -2.4
SKI2P35207 YOL166W-AYOL166W-A 156 nt0.03□□□□□ -2.4
SKI2P35207 COG6YNL041C 2520 nt0.02□□□□□ -2.41
SKI2P35207 YPL152W-AYPL152W-A 99 nt0.01□□□□□ -2.41
SKI2P35207 snR65snR65 100 nt0□□□□□ -2.41
SKI2P35207 YBL039C-AYBL039C-A 84 nt0□□□□□ -2.41
SKI2P35207 YOR302WYOR302W 78 nt-0.01□□□□□ -2.41
SKI2P35207 snR49snR49 165 nt-0.01□□□□□ -2.41
SKI2P35207 snR55snR55 98 nt-0.02□□□□□ -2.41
SKI2P35207 YOR231C-AYOR231C-A 201 nt-0.02□□□□□ -2.41
SKI2P35207 YJL182CYJL182C 318 nt-0.03□□□□□ -2.41
SKI2P35207 YDR210WYDR210W 228 nt-0.04□□□□□ -2.42
SKI2P35207 YBR099CYBR099C 384 nt-0.04□□□□□ -2.42
SKI2P35207 snR80snR80 171 nt-0.05□□□□□ -2.42
SKI2P35207 EST1YLR233C 2100 nt-0.05□□□□□ -2.42
SKI2P35207 YGL182CYGL182C 324 nt-0.06□□□□□ -2.42
SKI2P35207 YML099W-AYML099W-A 330 nt-0.06□□□□□ -2.42
SKI2P35207 YNL097C-BYNL097C-B 123 nt-0.06□□□□□ -2.42
SKI2P35207 YER181CYER181C 324 nt-0.07□□□□□ -2.42
SKI2P35207 YOL155W-AYOL155W-A 135 nt-0.07□□□□□ -2.42
SKI2P35207 snR128snR128 126 nt-0.09□□□□□ -2.42
SKI2P35207 YOR314W-AYOR314W-A 111 nt-0.11□□□□□ -2.43
SKI2P35207 YJL113WYJL113W 4647 nt-0.13□□□□□ -2.43
SKI2P35207 snR8snR8 190 nt-0.13□□□□□ -2.43
SKI2P35207 YOR381W-AYOR381W-A 168 nt-0.13□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms