Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 PIK1YNL267W 3201 nt1.59□□□□□ -2.16
CDC48P25694 GEA2YEL022W 4380 nt1.59□□□□□ -2.16
CDC48P25694 ASE1YOR058C 2658 nt1.59□□□□□ -2.16
CDC48P25694 NUP188YML103C 4968 nt1.58□□□□□ -2.16
CDC48P25694 YCR095W-AYCR095W-A 159 nt1.58□□□□□ -2.16
CDC48P25694 RPL26BYGR034W 384 nt1.58□□□□□ -2.16
CDC48P25694 tQ(UUG)E2tQ(UUG)E2 72 nt1.58□□□□□ -2.16
CDC48P25694 snR190snR190 190 nt1.58□□□□□ -2.16
CDC48P25694 YBR200W-AYBR200W-A 165 nt1.58□□□□□ -2.16
CDC48P25694 SEC21YNL287W 2808 nt1.58□□□□□ -2.16
CDC48P25694 NUP145YGL092W 3954 nt1.57□□□□□ -2.16
CDC48P25694 FYV10YIL097W 1551 nt1.57□□□□□ -2.16
CDC48P25694 YNL067W-BYNL067W-B 141 nt1.57□□□□□ -2.16
CDC48P25694 SEC3YER008C 4011 nt1.57□□□□□ -2.16
CDC48P25694 QCR9YGR183C 201 nt1.56□□□□□ -2.16
CDC48P25694 AZF1YOR113W 2745 nt1.55□□□□□ -2.16
CDC48P25694 YDR524C-AYDR524C-A 120 nt1.54□□□□□ -2.16
CDC48P25694 SOM1YEL059C-A 225 nt1.54□□□□□ -2.16
CDC48P25694 snR39BsnR39B 96 nt1.54□□□□□ -2.16
CDC48P25694 EST2YLR318W 2655 nt1.54□□□□□ -2.16
CDC48P25694 CDC39YCR093W 6327 nt1.54□□□□□ -2.16
CDC48P25694 YBR178WYBR178W 375 nt1.53□□□□□ -2.16
CDC48P25694 HKR1YDR420W 5409 nt1.53□□□□□ -2.16
CDC48P25694 YBL109WYBL109W 336 nt1.52□□□□□ -2.17
CDC48P25694 CDC25YLR310C 4770 nt1.52□□□□□ -2.17
CDC48P25694 LAA1YJL207C 6045 nt1.51□□□□□ -2.17
CDC48P25694 PMP2YEL017C-A 132 nt1.51□□□□□ -2.17
CDC48P25694 tH(GUG)E1tH(GUG)E1 72 nt1.51□□□□□ -2.17
CDC48P25694 tH(GUG)E2tH(GUG)E2 72 nt1.51□□□□□ -2.17
CDC48P25694 tH(GUG)G1tH(GUG)G1 72 nt1.51□□□□□ -2.17
CDC48P25694 tH(GUG)G2tH(GUG)G2 72 nt1.51□□□□□ -2.17
CDC48P25694 tH(GUG)HtH(GUG)H 72 nt1.51□□□□□ -2.17
CDC48P25694 tH(GUG)KtH(GUG)K 72 nt1.51□□□□□ -2.17
CDC48P25694 tH(GUG)MtH(GUG)M 72 nt1.51□□□□□ -2.17
CDC48P25694 YLR232WYLR232W 348 nt1.51□□□□□ -2.17
CDC48P25694 YHR131W-AYHR131W-A 246 nt1.49□□□□□ -2.17
CDC48P25694 YNL103W-AYNL103W-A 90 nt1.49□□□□□ -2.17
CDC48P25694 ROM2YLR371W 4071 nt1.48□□□□□ -2.17
CDC48P25694 IML1YJR138W 4755 nt1.48□□□□□ -2.17
CDC48P25694 TFB5YDR079C-A 219 nt1.47□□□□□ -2.17
CDC48P25694 YDR544CYDR544C 429 nt1.47□□□□□ -2.17
CDC48P25694 tM(CAU)Q2tM(CAU)Q2 78 nt1.47□□□□□ -2.17
CDC48P25694 RAD9YDR217C 3930 nt1.46□□□□□ -2.18
CDC48P25694 PAU12YGR294W 363 nt1.45□□□□□ -2.18
CDC48P25694 PAU24YBR301W 363 nt1.45□□□□□ -2.18
CDC48P25694 MSN5YDR335W 3675 nt1.45□□□□□ -2.18
CDC48P25694 CLU1YMR012W 3834 nt1.45□□□□□ -2.18
CDC48P25694 SEC8YPR055W 3198 nt1.44□□□□□ -2.18
CDC48P25694 KAP120YPL125W 3099 nt1.43□□□□□ -2.18
CDC48P25694 YMR326CYMR326C 309 nt1.42□□□□□ -2.18
CDC48P25694 snR61snR61 90 nt1.41□□□□□ -2.18
CDC48P25694 COG6YNL041C 2520 nt1.4□□□□□ -2.18
CDC48P25694 YDR210WYDR210W 228 nt1.4□□□□□ -2.19
CDC48P25694 YLR399W-AYLR399W-A 105 nt1.39□□□□□ -2.19
CDC48P25694 YPR160W-AYPR160W-A 81 nt1.39□□□□□ -2.19
CDC48P25694 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
CDC48P25694 tN(GUU)QtN(GUU)Q 71 nt1.37□□□□□ -2.19
CDC48P25694 YJL127W-AYJL127W-A 117 nt1.37□□□□□ -2.19
CDC48P25694 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
CDC48P25694 RPM2YML091C 3609 nt1.36□□□□□ -2.19
CDC48P25694 SEC1YDR164C 2175 nt1.34□□□□□ -2.19
CDC48P25694 tV(UAC)BtV(UAC)B 74 nt1.34□□□□□ -2.19
CDC48P25694 tV(UAC)DtV(UAC)D 74 nt1.34□□□□□ -2.19
CDC48P25694 YGR146C-AYGR146C-A 162 nt1.33□□□□□ -2.2
CDC48P25694 YHR217CYHR217C 462 nt1.33□□□□□ -2.2
CDC48P25694 RCO1YMR075W 2055 nt1.32□□□□□ -2.2
CDC48P25694 BUD3YCL014W 4911 nt1.32□□□□□ -2.2
CDC48P25694 BEM3YPL115C 3387 nt1.32□□□□□ -2.2
CDC48P25694 YDL073WYDL073W 2955 nt1.31□□□□□ -2.2
CDC48P25694 YSP1YHR155W 3687 nt1.29□□□□□ -2.2
CDC48P25694 BIR1YJR089W 2865 nt1.29□□□□□ -2.2
CDC48P25694 SIP4YJL089W 2490 nt1.28□□□□□ -2.2
CDC48P25694 SBH1YER087C-B 249 nt1.27□□□□□ -2.21
CDC48P25694 YGL041C-BYGL041C-B 183 nt1.27□□□□□ -2.21
CDC48P25694 NST1YNL091W 3723 nt1.25□□□□□ -2.21
CDC48P25694 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
CDC48P25694 UBP3YER151C 2739 nt1.23□□□□□ -2.21
CDC48P25694 YNL266WYNL266W 420 nt1.23□□□□□ -2.21
CDC48P25694 VAM6YDL077C 3150 nt1.22□□□□□ -2.21
CDC48P25694 YBR072C-AYBR072C-A 162 nt1.21□□□□□ -2.22
CDC48P25694 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
CDC48P25694 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
CDC48P25694 ULP2YIL031W 3105 nt1.2□□□□□ -2.22
CDC48P25694 GLG1YKR058W 1851 nt1.2□□□□□ -2.22
CDC48P25694 tF(GAA)BtF(GAA)B 73 nt1.19□□□□□ -2.22
CDC48P25694 tF(GAA)FtF(GAA)F 73 nt1.19□□□□□ -2.22
CDC48P25694 tF(GAA)GtF(GAA)G 73 nt1.19□□□□□ -2.22
CDC48P25694 tF(GAA)H1tF(GAA)H1 73 nt1.19□□□□□ -2.22
CDC48P25694 tF(GAA)H2tF(GAA)H2 73 nt1.19□□□□□ -2.22
CDC48P25694 tF(GAA)MtF(GAA)M 73 nt1.19□□□□□ -2.22
CDC48P25694 tF(GAA)P1tF(GAA)P1 73 nt1.19□□□□□ -2.22
CDC48P25694 tF(GAA)P2tF(GAA)P2 73 nt1.19□□□□□ -2.22
CDC48P25694 NNF2YGR089W 2811 nt1.19□□□□□ -2.22
CDC48P25694 UTP20YBL004W 7482 nt1.17□□□□□ -2.22
CDC48P25694 SCC2YDR180W 4482 nt1.16□□□□□ -2.22
CDC48P25694 BEM2YER155C 6504 nt1.14□□□□□ -2.23
CDC48P25694 YDL247W-AYDL247W-A 75 nt1.14□□□□□ -2.23
CDC48P25694 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
CDC48P25694 RKR1YMR247C 4689 nt1.12□□□□□ -2.23
CDC48P25694 snR81snR81 201 nt1.12□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 68.7 ms