Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	YLL019W-A	YLL019W-A	93 nt		0.46	□□□□□ -2.34
RPC53	P25441	AI1	Q0050	2505 nt		0.45	□□□□□ -2.34
RPC53	P25441	STE5	YDR103W	2754 nt		0.45	□□□□□ -2.34
RPC53	P25441	IQG1	YPL242C	4488 nt		0.45	□□□□□ -2.34
RPC53	P25441	YCR022C	YCR022C	345 nt		0.45	□□□□□ -2.34
RPC53	P25441	tN(GUU)Q	tN(GUU)Q	71 nt		0.45	□□□□□ -2.34
RPC53	P25441	ULI1	YFR026C	510 nt		0.44	□□□□□ -2.34
RPC53	P25441	YOR345C	YOR345C	351 nt		0.44	□□□□□ -2.34
RPC53	P25441	MLP2	YIL149C	5040 nt		0.43	□□□□□ -2.34
RPC53	P25441	ABF2	YMR072W	552 nt		0.43	□□□□□ -2.34
RPC53	P25441	NNF2	YGR089W	2811 nt		0.42	□□□□□ -2.34
RPC53	P25441	YER097W	YER097W	330 nt		0.42	□□□□□ -2.34
RPC53	P25441	YPR092W	YPR092W	306 nt		0.42	□□□□□ -2.34
RPC53	P25441	tR(ACG)Q2	tR(ACG)Q2	74 nt		0.41	□□□□□ -2.34
RPC53	P25441	YOR192C-B	YOR192C-B	5313 nt		0.4	□□□□□ -2.34
RPC53	P25441	YLR120W-A	YLR120W-A	102 nt		0.4	□□□□□ -2.35
RPC53	P25441	YOR161W-A	YOR161W-A	81 nt		0.4	□□□□□ -2.35
RPC53	P25441	RAD61	YDR014W	1944 nt		0.38	□□□□□ -2.35
RPC53	P25441	YOR008C-A	YOR008C-A	225 nt		0.37	□□□□□ -2.35
RPC53	P25441	YLR041W	YLR041W	321 nt		0.36	□□□□□ -2.35
RPC53	P25441	YDR366C	YDR366C	399 nt		0.35	□□□□□ -2.35
RPC53	P25441	YGR069W	YGR069W	336 nt		0.35	□□□□□ -2.35
RPC53	P25441	YHR131W-A	YHR131W-A	246 nt		0.35	□□□□□ -2.35
RPC53	P25441	YOR015W	YOR015W	360 nt		0.35	□□□□□ -2.35
RPC53	P25441	YDR371C-A	YDR371C-A	105 nt		0.34	□□□□□ -2.36
RPC53	P25441	RPS26A	YGL189C	360 nt		0.34	□□□□□ -2.36
RPC53	P25441	BUL2	YML111W	2763 nt		0.33	□□□□□ -2.36
RPC53	P25441	YGL052W	YGL052W	306 nt		0.32	□□□□□ -2.36
RPC53	P25441	YMR172C-A	YMR172C-A	384 nt		0.32	□□□□□ -2.36
RPC53	P25441	BIR1	YJR089W	2865 nt		0.32	□□□□□ -2.36
RPC53	P25441	NIP1	YMR309C	2439 nt		0.31	□□□□□ -2.36
RPC53	P25441	SNU13	YEL026W	381 nt		0.31	□□□□□ -2.36
RPC53	P25441	YLL006W-A	YLL006W-A	177 nt		0.31	□□□□□ -2.36
RPC53	P25441	COX12	YLR038C	252 nt		0.3	□□□□□ -2.36
RPC53	P25441	YNL146W	YNL146W	303 nt		0.3	□□□□□ -2.36
RPC53	P25441	RCO1	YMR075W	2055 nt		0.28	□□□□□ -2.36
RPC53	P25441	ORC3	YLL004W	1851 nt		0.28	□□□□□ -2.36
RPC53	P25441	YER053C-A	YER053C-A	114 nt		0.26	□□□□□ -2.37
RPC53	P25441	YER078W-A	YER078W-A	165 nt		0.26	□□□□□ -2.37
RPC53	P25441	YOR186C-A	YOR186C-A	210 nt		0.26	□□□□□ -2.37
RPC53	P25441	YOL013W-A	YOL013W-A	192 nt		0.25	□□□□□ -2.37
RPC53	P25441	snR74	snR74	88 nt		0.24	□□□□□ -2.37
RPC53	P25441	YIL002W-A	YIL002W-A	210 nt		0.24	□□□□□ -2.37
RPC53	P25441	YBL100W-B	YBL100W-B	5313 nt		0.23	□□□□□ -2.37
RPC53	P25441	YNL277W-A	YNL277W-A	189 nt		0.23	□□□□□ -2.37
RPC53	P25441	UTP8	YGR128C	2142 nt		0.23	□□□□□ -2.37
RPC53	P25441	YDR524W-C	YDR524W-C	90 nt		0.22	□□□□□ -2.37
RPC53	P25441	YBR072C-A	YBR072C-A	162 nt		0.21	□□□□□ -2.38
RPC53	P25441	YNL054W-B	YNL054W-B	5250 nt		0.21	□□□□□ -2.38
RPC53	P25441	YCR038W-A	YCR038W-A	126 nt		0.19	□□□□□ -2.38
RPC53	P25441	YIR030W-A	YIR030W-A	384 nt		0.18	□□□□□ -2.38
RPC53	P25441	YLR232W	YLR232W	348 nt		0.18	□□□□□ -2.38
RPC53	P25441	THO2	YNL139C	4794 nt		0.18	□□□□□ -2.38
RPC53	P25441	snR65	snR65	100 nt		0.16	□□□□□ -2.38
RPC53	P25441	YKU70	YMR284W	1809 nt		0.15	□□□□□ -2.38
RPC53	P25441	MYO1	YHR023W	5787 nt		0.15	□□□□□ -2.39
RPC53	P25441	YBR182C-A	YBR182C-A	195 nt		0.14	□□□□□ -2.39
RPC53	P25441	GLG1	YKR058W	1851 nt		0.14	□□□□□ -2.39
RPC53	P25441	YEL073C	YEL073C	324 nt		0.12	□□□□□ -2.39
RPC53	P25441	YMR158W-B	YMR158W-B	321 nt		0.11	□□□□□ -2.39
RPC53	P25441	SOV1	YMR066W	2697 nt		0.1	□□□□□ -2.39
RPC53	P25441	PRP39	YML046W	1890 nt		0.1	□□□□□ -2.39
RPC53	P25441	snR55	snR55	98 nt		0.09	□□□□□ -2.4
RPC53	P25441	APQ12	YIL040W	417 nt		0.09	□□□□□ -2.4
RPC53	P25441	YML099W-A	YML099W-A	330 nt		0.09	□□□□□ -2.4
RPC53	P25441	tF(GAA)Q	tF(GAA)Q	75 nt		0.08	□□□□□ -2.4
RPC53	P25441	CSE1	YGL238W	2883 nt		0.07	□□□□□ -2.4
RPC53	P25441	snR49	snR49	165 nt		0.07	□□□□□ -2.4
RPC53	P25441	YPL060C-A	YPL060C-A	3315 nt		0.07	□□□□□ -2.4
RPC53	P25441	TAH1	YCR060W	336 nt		0.06	□□□□□ -2.4
RPC53	P25441	YER181C	YER181C	324 nt		0.05	□□□□□ -2.4
RPC53	P25441	SDH6	YDR379C-A	240 nt		0.04	□□□□□ -2.4
RPC53	P25441	YPR010C-A	YPR010C-A	219 nt		0.04	□□□□□ -2.4
RPC53	P25441	snR45	snR45	172 nt		0.04	□□□□□ -2.4
RPC53	P25441	RPM2	YML091C	3609 nt		0.03	□□□□□ -2.4
RPC53	P25441	YGL041C	YGL041C	204 nt		-0.01	□□□□□ -2.41
RPC53	P25441	YOL155W-A	YOL155W-A	135 nt		-0.02	□□□□□ -2.41
RPC53	P25441	YBR099C	YBR099C	384 nt		-0.02	□□□□□ -2.41
RPC53	P25441	YDR544C	YDR544C	429 nt		-0.03	□□□□□ -2.41
RPC53	P25441	YPL152W-A	YPL152W-A	99 nt		-0.03	□□□□□ -2.41
RPC53	P25441	COG6	YNL041C	2520 nt		-0.04	□□□□□ -2.42
RPC53	P25441	YBL039C-A	YBL039C-A	84 nt		-0.05	□□□□□ -2.42
RPC53	P25441	YOR231C-A	YOR231C-A	201 nt		-0.09	□□□□□ -2.42
RPC53	P25441	snR128	snR128	126 nt		-0.1	□□□□□ -2.43
RPC53	P25441	YGL182C	YGL182C	324 nt		-0.11	□□□□□ -2.43
RPC53	P25441	YOR314W-A	YOR314W-A	111 nt		-0.11	□□□□□ -2.43
RPC53	P25441	YBR131C-A	YBR131C-A	90 nt		-0.11	□□□□□ -2.43
RPC53	P25441	YGL188C-A	YGL188C-A	141 nt		-0.12	□□□□□ -2.43
RPC53	P25441	EST1	YLR233C	2100 nt		-0.13	□□□□□ -2.43
RPC53	P25441	snR8	snR8	190 nt		-0.16	□□□□□ -2.44
RPC53	P25441	TFB5	YDR079C-A	219 nt		-0.16	□□□□□ -2.44
RPC53	P25441	YDR210W	YDR210W	228 nt		-0.16	□□□□□ -2.44
RPC53	P25441	YJL182C	YJL182C	318 nt		-0.18	□□□□□ -2.44
RPC53	P25441	Q0142	Q0142	177 nt		-0.19	□□□□□ -2.44
RPC53	P25441	YEL014C	YEL014C	306 nt		-0.2	□□□□□ -2.44
RPC53	P25441	YOR381W-A	YOR381W-A	168 nt		-0.23	□□□□□ -2.45
RPC53	P25441	YGR164W	YGR164W	336 nt		-0.24	□□□□□ -2.45
RPC53	P25441	YNL097C-B	YNL097C-B	123 nt		-0.24	□□□□□ -2.45
RPC53	P25441	YOR302W	YOR302W	78 nt		-0.25	□□□□□ -2.45
RPC53	P25441	snR46	snR46	197 nt		-0.25	□□□□□ -2.45

Retrieved 100 of 7,029 protein–RNA pairs in 54.8 ms