Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 YER053C-AYER053C-A 114 nt-1.83□□□□□ -2.7
XRN1P22147 YKL044WYKL044W 321 nt-1.86□□□□□ -2.71
XRN1P22147 YFL012WYFL012W 447 nt-1.87□□□□□ -2.71
XRN1P22147 YLR456WYLR456W 615 nt-1.87□□□□□ -2.71
XRN1P22147 YOR170WYOR170W 306 nt-1.89□□□□□ -2.71
XRN1P22147 YDR543CYDR543C 300 nt-1.9□□□□□ -2.71
XRN1P22147 YAL068W-AYAL068W-A 255 nt-1.9□□□□□ -2.71
XRN1P22147 tY(GUA)QtY(GUA)Q 84 nt-1.91□□□□□ -2.71
XRN1P22147 YBL039C-AYBL039C-A 84 nt-1.91□□□□□ -2.71
XRN1P22147 YIL029CYIL029C 429 nt-1.93□□□□□ -2.72
XRN1P22147 VPS20YMR077C 666 nt-1.93□□□□□ -2.72
XRN1P22147 YDL016CYDL016C 303 nt-1.94□□□□□ -2.72
XRN1P22147 CBS1YDL069C 690 nt-1.94□□□□□ -2.72
XRN1P22147 snR74snR74 88 nt-1.96□□□□□ -2.72
XRN1P22147 PCC1YKR095W-A 267 nt-1.98□□□□□ -2.73
XRN1P22147 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
XRN1P22147 Q0142Q0142 177 nt-2.01□□□□□ -2.73
XRN1P22147 YMR193C-AYMR193C-A 387 nt-2.01□□□□□ -2.73
XRN1P22147 YGR174W-AYGR174W-A 87 nt-2.01□□□□□ -2.73
XRN1P22147 YIR021W-AYIR021W-A 213 nt-2.02□□□□□ -2.73
XRN1P22147 YAF9YNL107W 681 nt-2.04□□□□□ -2.74
XRN1P22147 YER090C-AYER090C-A 90 nt-2.05□□□□□ -2.74
XRN1P22147 CSE2YNR010W 450 nt-2.05□□□□□ -2.74
XRN1P22147 GPI15YNL038W 690 nt-2.06□□□□□ -2.74
XRN1P22147 YGR069WYGR069W 336 nt-2.07□□□□□ -2.74
XRN1P22147 tQ(UUG)QtQ(UUG)Q 76 nt-2.07□□□□□ -2.74
XRN1P22147 PRM3YPL192C 402 nt-2.07□□□□□ -2.74
XRN1P22147 YBR285WYBR285W 435 nt-2.07□□□□□ -2.74
XRN1P22147 TOM22YNL131W 459 nt-2.09□□□□□ -2.74
XRN1P22147 YOR121CYOR121C 306 nt-2.09□□□□□ -2.74
XRN1P22147 JLP2YMR132C 627 nt-2.1□□□□□ -2.75
XRN1P22147 YHR125WYHR125W 306 nt-2.12□□□□□ -2.75
XRN1P22147 YPR016W-AYPR016W-A 261 nt-2.12□□□□□ -2.75
XRN1P22147 RPS27BYHR021C 249 nt-2.13□□□□□ -2.75
XRN1P22147 PMP2YEL017C-A 132 nt-2.15□□□□□ -2.75
XRN1P22147 YDR544CYDR544C 429 nt-2.18□□□□□ -2.76
XRN1P22147 YAR047CYAR047C 321 nt-2.18□□□□□ -2.76
XRN1P22147 YOR314W-AYOR314W-A 111 nt-2.19□□□□□ -2.76
XRN1P22147 CDC65tQ(CUG)M 72 nt-2.2□□□□□ -2.76
XRN1P22147 YLL019W-AYLL019W-A 93 nt-2.2□□□□□ -2.76
XRN1P22147 BI2Q0110 1272 nt-2.21□□□□□ -2.76
XRN1P22147 YNL266WYNL266W 420 nt-2.22□□□□□ -2.77
XRN1P22147 snR81snR81 201 nt-2.24□□□□□ -2.77
XRN1P22147 YLR269CYLR269C 351 nt-2.25□□□□□ -2.77
XRN1P22147 YJL197C-AYJL197C-A 282 nt-2.26□□□□□ -2.77
XRN1P22147 HMRA1YCR097W 381 nt-2.3□□□□□ -2.78
XRN1P22147 snR77snR77 88 nt-2.3□□□□□ -2.78
XRN1P22147 YGL149WYGL149W 306 nt-2.3□□□□□ -2.78
XRN1P22147 YLR412C-AYLR412C-A 207 nt-2.3□□□□□ -2.78
XRN1P22147 snR50snR50 90 nt-2.33□□□□□ -2.78
XRN1P22147 YGR240C-AYGR240C-A 201 nt-2.34□□□□□ -2.78
XRN1P22147 YIL115W-AYIL115W-A 372 nt-2.35□□□□□ -2.79
XRN1P22147 YML099W-AYML099W-A 330 nt-2.36□□□□□ -2.79
XRN1P22147 YNL205CYNL205C 423 nt-2.36□□□□□ -2.79
XRN1P22147 YML054C-AYML054C-A 159 nt-2.37□□□□□ -2.79
XRN1P22147 snR69snR69 101 nt-2.39□□□□□ -2.79
XRN1P22147 RDS3YPR094W 324 nt-2.42□□□□□ -2.8
XRN1P22147 CSN9YDR179C 489 nt-2.45□□□□□ -2.8
XRN1P22147 YLR202CYLR202C 327 nt-2.45□□□□□ -2.8
XRN1P22147 YOR072W-BYOR072W-B 162 nt-2.45□□□□□ -2.8
XRN1P22147 YDR102CYDR102C 333 nt-2.47□□□□□ -2.8
XRN1P22147 snR67snR67 82 nt-2.47□□□□□ -2.81
XRN1P22147 snR39BsnR39B 96 nt-2.47□□□□□ -2.81
XRN1P22147 snR54snR54 86 nt-2.47□□□□□ -2.81
XRN1P22147 YER137W-AYER137W-A 306 nt-2.5□□□□□ -2.81
XRN1P22147 MPC1YGL080W 393 nt-2.52□□□□□ -2.81
XRN1P22147 YAL066WYAL066W 309 nt-2.54□□□□□ -2.82
XRN1P22147 YDR048CYDR048C 315 nt-2.56□□□□□ -2.82
XRN1P22147 YMR315W-AYMR315W-A 108 nt-2.57□□□□□ -2.82
XRN1P22147 YKL063CYKL063C 504 nt-2.59□□□□□ -2.82
XRN1P22147 YDL158CYDL158C 309 nt-2.61□□□□□ -2.83
XRN1P22147 YER006C-AYER006C-A 318 nt-2.63□□□□□ -2.83
XRN1P22147 EAF6YJR082C 342 nt-2.63□□□□□ -2.83
XRN1P22147 YOR008C-AYOR008C-A 225 nt-2.63□□□□□ -2.83
XRN1P22147 YER097WYER097W 330 nt-2.67□□□□□ -2.84
XRN1P22147 YGR146C-AYGR146C-A 162 nt-2.68□□□□□ -2.84
XRN1P22147 YOR293C-AYOR293C-A 150 nt-2.68□□□□□ -2.84
XRN1P22147 tD(GUC)QtD(GUC)Q 75 nt-2.68□□□□□ -2.84
XRN1P22147 YFL032WYFL032W 321 nt-2.71□□□□□ -2.84
XRN1P22147 YBR182C-AYBR182C-A 195 nt-2.72□□□□□ -2.84
XRN1P22147 YLR286W-AYLR286W-A 135 nt-2.74□□□□□ -2.85
XRN1P22147 YOR309CYOR309C 381 nt-2.81□□□□□ -2.86
XRN1P22147 snR60snR60 104 nt-2.82□□□□□ -2.86
XRN1P22147 YMR172C-AYMR172C-A 384 nt-2.82□□□□□ -2.86
XRN1P22147 YNL028WYNL028W 318 nt-2.82□□□□□ -2.86
XRN1P22147 YNL324WYNL324W 396 nt-2.83□□□□□ -2.86
XRN1P22147 YJL047C-AYJL047C-A 135 nt-2.83□□□□□ -2.86
XRN1P22147 YDL159C-BYDL159C-B 177 nt-2.84□□□□□ -2.86
XRN1P22147 YFL019CYFL019C 354 nt-2.84□□□□□ -2.86
XRN1P22147 YOL038C-AYOL038C-A 96 nt-2.84□□□□□ -2.86
XRN1P22147 tM(CAU)Q2tM(CAU)Q2 78 nt-2.85□□□□□ -2.87
XRN1P22147 YMR001C-AYMR001C-A 231 nt-2.88□□□□□ -2.87
XRN1P22147 YLR342W-AYLR342W-A 174 nt-2.89□□□□□ -2.87
XRN1P22147 YLR434CYLR434C 384 nt-2.89□□□□□ -2.87
XRN1P22147 YOR376W-AYOR376W-A 156 nt-2.91□□□□□ -2.88
XRN1P22147 YOR381W-AYOR381W-A 168 nt-2.91□□□□□ -2.88
XRN1P22147 ATP6Q0085 780 nt-2.95□□□□□ -2.88
XRN1P22147 YBR196C-AYBR196C-A 150 nt-2.96□□□□□ -2.88
XRN1P22147 YJR157WYJR157W 363 nt-2.99□□□□□ -2.89
XRN1P22147 STE18YJR086W 333 nt-3□□□□□ -2.89
Retrieved 100 of 7,029 protein–RNA pairs in 36.4 ms