Protein–RNA interactions for Protein: P22138

RPA135, DNA-directed RNA polymerase I subunit RPA135, yeastyeast

Known RBP Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA135P22138 PMP2YEL017C-A 132 nt1.48□□□□□ -2.17
RPA135P22138 YLR041WYLR041W 321 nt1.48□□□□□ -2.17
RPA135P22138 YMR326CYMR326C 309 nt1.48□□□□□ -2.17
RPA135P22138 snR39BsnR39B 96 nt1.47□□□□□ -2.17
RPA135P22138 ASE1YOR058C 2658 nt1.47□□□□□ -2.17
RPA135P22138 YKL100W-AYKL100W-A 90 nt1.46□□□□□ -2.18
RPA135P22138 SET3YKR029C 2256 nt1.46□□□□□ -2.18
RPA135P22138 YHR217CYHR217C 462 nt1.45□□□□□ -2.18
RPA135P22138 NOP9YJL010C 2001 nt1.44□□□□□ -2.18
RPA135P22138 snR61snR61 90 nt1.44□□□□□ -2.18
RPA135P22138 SOM1YEL059C-A 225 nt1.44□□□□□ -2.18
RPA135P22138 UTP8YGR128C 2142 nt1.44□□□□□ -2.18
RPA135P22138 NUP192YJL039C 5052 nt1.43□□□□□ -2.18
RPA135P22138 TAH1YCR060W 336 nt1.43□□□□□ -2.18
RPA135P22138 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
RPA135P22138 YNL067W-BYNL067W-B 141 nt1.43□□□□□ -2.18
RPA135P22138 COG6YNL041C 2520 nt1.43□□□□□ -2.18
RPA135P22138 STO1YMR125W 2586 nt1.43□□□□□ -2.18
RPA135P22138 YHR131W-AYHR131W-A 246 nt1.42□□□□□ -2.18
RPA135P22138 QCR9YGR183C 201 nt1.41□□□□□ -2.18
RPA135P22138 APL3YBL037W 3078 nt1.41□□□□□ -2.18
RPA135P22138 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
RPA135P22138 YML002WYML002W 2214 nt1.4□□□□□ -2.18
RPA135P22138 STF2YGR008C 255 nt1.4□□□□□ -2.19
RPA135P22138 SBH1YER087C-B 249 nt1.38□□□□□ -2.19
RPA135P22138 YBR200W-AYBR200W-A 165 nt1.38□□□□□ -2.19
RPA135P22138 PMD1YER132C 5262 nt1.38□□□□□ -2.19
RPA135P22138 RCO1YMR075W 2055 nt1.37□□□□□ -2.19
RPA135P22138 CCH1YGR217W 6120 nt1.37□□□□□ -2.19
RPA135P22138 LAA1YJL207C 6045 nt1.37□□□□□ -2.19
RPA135P22138 NUP188YML103C 4968 nt1.37□□□□□ -2.19
RPA135P22138 WAR1YML076C 2835 nt1.36□□□□□ -2.19
RPA135P22138 FYV10YIL097W 1551 nt1.36□□□□□ -2.19
RPA135P22138 snR190snR190 190 nt1.36□□□□□ -2.19
RPA135P22138 CDC39YCR093W 6327 nt1.36□□□□□ -2.19
RPA135P22138 RPM2YML091C 3609 nt1.36□□□□□ -2.19
RPA135P22138 YDL073WYDL073W 2955 nt1.35□□□□□ -2.19
RPA135P22138 RPL26BYGR034W 384 nt1.34□□□□□ -2.19
RPA135P22138 CAT8YMR280C 4302 nt1.33□□□□□ -2.2
RPA135P22138 YDR210WYDR210W 228 nt1.33□□□□□ -2.2
RPA135P22138 SMC1YFL008W 3678 nt1.33□□□□□ -2.2
RPA135P22138 YLR232WYLR232W 348 nt1.32□□□□□ -2.2
RPA135P22138 KAP120YPL125W 3099 nt1.32□□□□□ -2.2
RPA135P22138 YGL041C-BYGL041C-B 183 nt1.3□□□□□ -2.2
RPA135P22138 tM(CAU)Q2tM(CAU)Q2 78 nt1.3□□□□□ -2.2
RPA135P22138 YPR117WYPR117W 7470 nt1.3□□□□□ -2.2
RPA135P22138 PRP16YKR086W 3216 nt1.3□□□□□ -2.2
RPA135P22138 YDL247W-AYDL247W-A 75 nt1.29□□□□□ -2.2
RPA135P22138 GEA2YEL022W 4380 nt1.29□□□□□ -2.2
RPA135P22138 YNL284C-BYNL284C-B 5268 nt1.27□□□□□ -2.21
RPA135P22138 SEC1YDR164C 2175 nt1.27□□□□□ -2.21
RPA135P22138 SCC2YDR180W 4482 nt1.25□□□□□ -2.21
RPA135P22138 SEC8YPR055W 3198 nt1.24□□□□□ -2.21
RPA135P22138 LTE1YAL024C 4308 nt1.24□□□□□ -2.21
RPA135P22138 BIR1YJR089W 2865 nt1.23□□□□□ -2.21
RPA135P22138 YGR146C-AYGR146C-A 162 nt1.23□□□□□ -2.21
RPA135P22138 YJL127W-AYJL127W-A 117 nt1.22□□□□□ -2.21
RPA135P22138 YPR160W-AYPR160W-A 81 nt1.22□□□□□ -2.21
RPA135P22138 tN(GUU)QtN(GUU)Q 71 nt1.21□□□□□ -2.22
RPA135P22138 YPL060C-AYPL060C-A 3315 nt1.2□□□□□ -2.22
RPA135P22138 YLR399W-AYLR399W-A 105 nt1.2□□□□□ -2.22
RPA135P22138 snR81snR81 201 nt1.19□□□□□ -2.22
RPA135P22138 tS(GCU)Q1tS(GCU)Q1 86 nt1.19□□□□□ -2.22
RPA135P22138 YNL266WYNL266W 420 nt1.18□□□□□ -2.22
RPA135P22138 UBP3YER151C 2739 nt1.18□□□□□ -2.22
RPA135P22138 YBR072C-AYBR072C-A 162 nt1.17□□□□□ -2.22
RPA135P22138 YGR130CYGR130C 2451 nt1.15□□□□□ -2.22
RPA135P22138 NNF2YGR089W 2811 nt1.15□□□□□ -2.23
RPA135P22138 IML1YJR138W 4755 nt1.14□□□□□ -2.23
RPA135P22138 ANS1YHR126C 480 nt1.14□□□□□ -2.23
RPA135P22138 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
RPA135P22138 YSP1YHR155W 3687 nt1.13□□□□□ -2.23
RPA135P22138 tH(GUG)E1tH(GUG)E1 72 nt1.13□□□□□ -2.23
RPA135P22138 tH(GUG)E2tH(GUG)E2 72 nt1.13□□□□□ -2.23
RPA135P22138 tH(GUG)G1tH(GUG)G1 72 nt1.13□□□□□ -2.23
RPA135P22138 tH(GUG)G2tH(GUG)G2 72 nt1.13□□□□□ -2.23
RPA135P22138 tH(GUG)HtH(GUG)H 72 nt1.13□□□□□ -2.23
RPA135P22138 tH(GUG)KtH(GUG)K 72 nt1.13□□□□□ -2.23
RPA135P22138 tH(GUG)MtH(GUG)M 72 nt1.13□□□□□ -2.23
RPA135P22138 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
RPA135P22138 YAL037C-AYAL037C-A 93 nt1.12□□□□□ -2.23
RPA135P22138 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
RPA135P22138 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
RPA135P22138 YIL142C-AYIL142C-A 333 nt1.1□□□□□ -2.23
RPA135P22138 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
RPA135P22138 ULP2YIL031W 3105 nt1.09□□□□□ -2.23
RPA135P22138 BEM3YPL115C 3387 nt1.07□□□□□ -2.24
RPA135P22138 GLG1YKR058W 1851 nt1.07□□□□□ -2.24
RPA135P22138 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
RPA135P22138 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
RPA135P22138 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
RPA135P22138 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
RPA135P22138 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
RPA135P22138 SEC10YLR166C 2616 nt1.03□□□□□ -2.24
RPA135P22138 YLL066W-BYLL066W-B 171 nt1.03□□□□□ -2.24
RPA135P22138 YBL071C-BYBL071C-B 99 nt1.03□□□□□ -2.24
RPA135P22138 SPT7YBR081C 3999 nt1.02□□□□□ -2.25
RPA135P22138 RPS26AYGL189C 360 nt1.02□□□□□ -2.25
RPA135P22138 YOL083C-AYOL083C-A 141 nt1.02□□□□□ -2.25
RPA135P22138 YBR196C-AYBR196C-A 150 nt1.02□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 32.2 ms