Protein–RNA interactions for Protein: P20676

NUP1, Nucleoporin NUP1, yeastyeast

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP1P20676 RPM2YML091C 3609 nt1.42□□□□□ -2.18
NUP1P20676 IRA1YBR140C 9279 nt1.42□□□□□ -2.18
NUP1P20676 RAD9YDR217C 3930 nt1.42□□□□□ -2.18
NUP1P20676 YGL041C-BYGL041C-B 183 nt1.42□□□□□ -2.18
NUP1P20676 ROM2YLR371W 4071 nt1.42□□□□□ -2.18
NUP1P20676 RCO1YMR075W 2055 nt1.41□□□□□ -2.18
NUP1P20676 YML002WYML002W 2214 nt1.41□□□□□ -2.18
NUP1P20676 SXM1YDR395W 2835 nt1.41□□□□□ -2.18
NUP1P20676 CHS1YNL192W 3396 nt1.41□□□□□ -2.18
NUP1P20676 NOP9YJL010C 2001 nt1.4□□□□□ -2.19
NUP1P20676 BST1YFL025C 3090 nt1.4□□□□□ -2.19
NUP1P20676 NUP157YER105C 4176 nt1.4□□□□□ -2.19
NUP1P20676 ASE1YOR058C 2658 nt1.39□□□□□ -2.19
NUP1P20676 TRM732YMR259C 4263 nt1.38□□□□□ -2.19
NUP1P20676 CAT8YMR280C 4302 nt1.38□□□□□ -2.19
NUP1P20676 PIK1YNL267W 3201 nt1.38□□□□□ -2.19
NUP1P20676 SET3YKR029C 2256 nt1.37□□□□□ -2.19
NUP1P20676 CDC25YLR310C 4770 nt1.37□□□□□ -2.19
NUP1P20676 SEC3YER008C 4011 nt1.37□□□□□ -2.19
NUP1P20676 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
NUP1P20676 STO1YMR125W 2586 nt1.36□□□□□ -2.19
NUP1P20676 FYV10YIL097W 1551 nt1.35□□□□□ -2.19
NUP1P20676 tM(CAU)Q2tM(CAU)Q2 78 nt1.35□□□□□ -2.19
NUP1P20676 PET127YOR017W 2403 nt1.35□□□□□ -2.19
NUP1P20676 SEC21YNL287W 2808 nt1.34□□□□□ -2.19
NUP1P20676 YDR210WYDR210W 228 nt1.34□□□□□ -2.19
NUP1P20676 YLR232WYLR232W 348 nt1.34□□□□□ -2.19
NUP1P20676 snR190snR190 190 nt1.34□□□□□ -2.19
NUP1P20676 FYV8YGR196C 2454 nt1.34□□□□□ -2.2
NUP1P20676 KAP120YPL125W 3099 nt1.34□□□□□ -2.2
NUP1P20676 YDL073WYDL073W 2955 nt1.33□□□□□ -2.2
NUP1P20676 SWI4YER111C 3282 nt1.33□□□□□ -2.2
NUP1P20676 APL3YBL037W 3078 nt1.32□□□□□ -2.2
NUP1P20676 SMC1YFL008W 3678 nt1.32□□□□□ -2.2
NUP1P20676 RPL26BYGR034W 384 nt1.32□□□□□ -2.2
NUP1P20676 tS(GCU)Q1tS(GCU)Q1 86 nt1.32□□□□□ -2.2
NUP1P20676 HKR1YDR420W 5409 nt1.31□□□□□ -2.2
NUP1P20676 AZF1YOR113W 2745 nt1.31□□□□□ -2.2
NUP1P20676 WAR1YML076C 2835 nt1.3□□□□□ -2.2
NUP1P20676 EST2YLR318W 2655 nt1.3□□□□□ -2.2
NUP1P20676 YIL142C-AYIL142C-A 333 nt1.3□□□□□ -2.2
NUP1P20676 YGR130CYGR130C 2451 nt1.3□□□□□ -2.2
NUP1P20676 SPC110YDR356W 2835 nt1.3□□□□□ -2.2
NUP1P20676 BIR1YJR089W 2865 nt1.29□□□□□ -2.2
NUP1P20676 snR81snR81 201 nt1.28□□□□□ -2.2
NUP1P20676 YGR146C-AYGR146C-A 162 nt1.28□□□□□ -2.2
NUP1P20676 SEC1YDR164C 2175 nt1.27□□□□□ -2.21
NUP1P20676 YJL127W-AYJL127W-A 117 nt1.27□□□□□ -2.21
NUP1P20676 NUP188YML103C 4968 nt1.27□□□□□ -2.21
NUP1P20676 MSH3YCR092C 3057 nt1.26□□□□□ -2.21
NUP1P20676 tQ(UUG)E2tQ(UUG)E2 72 nt1.26□□□□□ -2.21
NUP1P20676 PRP16YKR086W 3216 nt1.26□□□□□ -2.21
NUP1P20676 BUD3YCL014W 4911 nt1.25□□□□□ -2.21
NUP1P20676 YNL266WYNL266W 420 nt1.25□□□□□ -2.21
NUP1P20676 YBR200W-AYBR200W-A 165 nt1.25□□□□□ -2.21
NUP1P20676 YAL037C-AYAL037C-A 93 nt1.24□□□□□ -2.21
NUP1P20676 CLU1YMR012W 3834 nt1.24□□□□□ -2.21
NUP1P20676 YBR072C-AYBR072C-A 162 nt1.24□□□□□ -2.21
NUP1P20676 SEC8YPR055W 3198 nt1.22□□□□□ -2.21
NUP1P20676 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
NUP1P20676 CDC39YCR093W 6327 nt1.22□□□□□ -2.21
NUP1P20676 GEA2YEL022W 4380 nt1.22□□□□□ -2.21
NUP1P20676 LAA1YJL207C 6045 nt1.21□□□□□ -2.22
NUP1P20676 YLL066W-BYLL066W-B 171 nt1.21□□□□□ -2.22
NUP1P20676 tH(GUG)E1tH(GUG)E1 72 nt1.19□□□□□ -2.22
NUP1P20676 tH(GUG)E2tH(GUG)E2 72 nt1.19□□□□□ -2.22
NUP1P20676 tH(GUG)G1tH(GUG)G1 72 nt1.19□□□□□ -2.22
NUP1P20676 tH(GUG)G2tH(GUG)G2 72 nt1.19□□□□□ -2.22
NUP1P20676 tH(GUG)HtH(GUG)H 72 nt1.19□□□□□ -2.22
NUP1P20676 tH(GUG)KtH(GUG)K 72 nt1.19□□□□□ -2.22
NUP1P20676 tH(GUG)MtH(GUG)M 72 nt1.19□□□□□ -2.22
NUP1P20676 snR45snR45 172 nt1.19□□□□□ -2.22
NUP1P20676 YLR399W-AYLR399W-A 105 nt1.18□□□□□ -2.22
NUP1P20676 YPR160W-AYPR160W-A 81 nt1.18□□□□□ -2.22
NUP1P20676 YPL060C-AYPL060C-A 3315 nt1.18□□□□□ -2.22
NUP1P20676 tN(GUU)QtN(GUU)Q 71 nt1.16□□□□□ -2.22
NUP1P20676 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
NUP1P20676 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
NUP1P20676 PAU12YGR294W 363 nt1.15□□□□□ -2.23
NUP1P20676 PAU24YBR301W 363 nt1.15□□□□□ -2.23
NUP1P20676 NNF2YGR089W 2811 nt1.15□□□□□ -2.23
NUP1P20676 snR62snR62 100 nt1.14□□□□□ -2.23
NUP1P20676 YSP1YHR155W 3687 nt1.14□□□□□ -2.23
NUP1P20676 DOP1YDR141C 5097 nt1.13□□□□□ -2.23
NUP1P20676 ULP2YIL031W 3105 nt1.12□□□□□ -2.23
NUP1P20676 IML1YJR138W 4755 nt1.11□□□□□ -2.23
NUP1P20676 YBL071C-BYBL071C-B 99 nt1.11□□□□□ -2.23
NUP1P20676 YOL083C-AYOL083C-A 141 nt1.1□□□□□ -2.23
NUP1P20676 BEM3YPL115C 3387 nt1.1□□□□□ -2.23
NUP1P20676 RPS26AYGL189C 360 nt1.09□□□□□ -2.23
NUP1P20676 YBR196C-AYBR196C-A 150 nt1.09□□□□□ -2.23
NUP1P20676 GLG1YKR058W 1851 nt1.09□□□□□ -2.24
NUP1P20676 UBP3YER151C 2739 nt1.09□□□□□ -2.24
NUP1P20676 SEC10YLR166C 2616 nt1.08□□□□□ -2.24
NUP1P20676 SPT7YBR081C 3999 nt1.05□□□□□ -2.24
NUP1P20676 SIP4YJL089W 2490 nt1.03□□□□□ -2.24
NUP1P20676 NST1YNL091W 3723 nt1.02□□□□□ -2.25
NUP1P20676 YOL164W-AYOL164W-A 183 nt1.01□□□□□ -2.25
NUP1P20676 tF(GAA)BtF(GAA)B 73 nt1□□□□□ -2.25
NUP1P20676 tF(GAA)FtF(GAA)F 73 nt1□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 65.1 ms