Protein–RNA interactions for Protein: P0CX43

RPL1A, 60S ribosomal protein L1-A, yeastyeast

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL1AP0CX43 YLL019W-AYLL019W-A 93 nt0.43□□□□□ -2.34
RPL1AP0CX43 YOR072W-BYOR072W-B 162 nt0.43□□□□□ -2.34
RPL1AP0CX43 YOR345CYOR345C 351 nt0.43□□□□□ -2.34
RPL1AP0CX43 YCR022CYCR022C 345 nt0.42□□□□□ -2.34
RPL1AP0CX43 YER078W-AYER078W-A 165 nt0.42□□□□□ -2.34
RPL1AP0CX43 tN(GUU)QtN(GUU)Q 71 nt0.42□□□□□ -2.34
RPL1AP0CX43 IQG1YPL242C 4488 nt0.42□□□□□ -2.34
RPL1AP0CX43 YSP1YHR155W 3687 nt0.42□□□□□ -2.34
RPL1AP0CX43 ULI1YFR026C 510 nt0.41□□□□□ -2.34
RPL1AP0CX43 YGL123C-AYGL123C-A 231 nt0.41□□□□□ -2.34
RPL1AP0CX43 YPR092WYPR092W 306 nt0.41□□□□□ -2.34
RPL1AP0CX43 STE5YDR103W 2754 nt0.4□□□□□ -2.35
RPL1AP0CX43 YOR192C-BYOR192C-B 5313 nt0.39□□□□□ -2.35
RPL1AP0CX43 YER097WYER097W 330 nt0.39□□□□□ -2.35
RPL1AP0CX43 NNF2YGR089W 2811 nt0.39□□□□□ -2.35
RPL1AP0CX43 YOR161W-AYOR161W-A 81 nt0.38□□□□□ -2.35
RPL1AP0CX43 YLR120W-AYLR120W-A 102 nt0.37□□□□□ -2.35
RPL1AP0CX43 tR(ACG)Q2tR(ACG)Q2 74 nt0.36□□□□□ -2.35
RPL1AP0CX43 RAD61YDR014W 1944 nt0.36□□□□□ -2.35
RPL1AP0CX43 MLP2YIL149C 5040 nt0.35□□□□□ -2.35
RPL1AP0CX43 TAH1YCR060W 336 nt0.35□□□□□ -2.35
RPL1AP0CX43 YOR015WYOR015W 360 nt0.35□□□□□ -2.35
RPL1AP0CX43 YLR041WYLR041W 321 nt0.33□□□□□ -2.36
RPL1AP0CX43 ABF2YMR072W 552 nt0.33□□□□□ -2.36
RPL1AP0CX43 YGR069WYGR069W 336 nt0.32□□□□□ -2.36
RPL1AP0CX43 YHR131W-AYHR131W-A 246 nt0.32□□□□□ -2.36
RPL1AP0CX43 YOR008C-AYOR008C-A 225 nt0.32□□□□□ -2.36
RPL1AP0CX43 THO2YNL139C 4794 nt0.32□□□□□ -2.36
RPL1AP0CX43 YDR371C-AYDR371C-A 105 nt0.3□□□□□ -2.36
RPL1AP0CX43 RPS26AYGL189C 360 nt0.3□□□□□ -2.36
RPL1AP0CX43 YDR366CYDR366C 399 nt0.29□□□□□ -2.36
RPL1AP0CX43 SNU13YEL026W 381 nt0.29□□□□□ -2.36
RPL1AP0CX43 YGL052WYGL052W 306 nt0.29□□□□□ -2.36
RPL1AP0CX43 YNL146WYNL146W 303 nt0.29□□□□□ -2.36
RPL1AP0CX43 NIP1YMR309C 2439 nt0.29□□□□□ -2.36
RPL1AP0CX43 ORC3YLL004W 1851 nt0.27□□□□□ -2.37
RPL1AP0CX43 PRP39YML046W 1890 nt0.27□□□□□ -2.37
RPL1AP0CX43 YLL006W-AYLL006W-A 177 nt0.27□□□□□ -2.37
RPL1AP0CX43 YMR172C-AYMR172C-A 384 nt0.27□□□□□ -2.37
RPL1AP0CX43 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
RPL1AP0CX43 MYO1YHR023W 5787 nt0.26□□□□□ -2.37
RPL1AP0CX43 snR74snR74 88 nt0.25□□□□□ -2.37
RPL1AP0CX43 YOL013W-AYOL013W-A 192 nt0.25□□□□□ -2.37
RPL1AP0CX43 COX12YLR038C 252 nt0.24□□□□□ -2.37
RPL1AP0CX43 YOR186C-AYOR186C-A 210 nt0.24□□□□□ -2.37
RPL1AP0CX43 YER053C-AYER053C-A 114 nt0.23□□□□□ -2.37
RPL1AP0CX43 YNL277W-AYNL277W-A 189 nt0.22□□□□□ -2.37
RPL1AP0CX43 YIL002W-AYIL002W-A 210 nt0.21□□□□□ -2.38
RPL1AP0CX43 RCO1YMR075W 2055 nt0.21□□□□□ -2.38
RPL1AP0CX43 YBR072C-AYBR072C-A 162 nt0.19□□□□□ -2.38
RPL1AP0CX43 YDR524W-CYDR524W-C 90 nt0.17□□□□□ -2.38
RPL1AP0CX43 YNL054W-BYNL054W-B 5250 nt0.17□□□□□ -2.38
RPL1AP0CX43 YCR038W-AYCR038W-A 126 nt0.16□□□□□ -2.38
RPL1AP0CX43 YLR232WYLR232W 348 nt0.15□□□□□ -2.39
RPL1AP0CX43 YKU70YMR284W 1809 nt0.14□□□□□ -2.39
RPL1AP0CX43 YIR030W-AYIR030W-A 384 nt0.13□□□□□ -2.39
RPL1AP0CX43 YBR182C-AYBR182C-A 195 nt0.13□□□□□ -2.39
RPL1AP0CX43 YBL100W-BYBL100W-B 5313 nt0.13□□□□□ -2.39
RPL1AP0CX43 snR65snR65 100 nt0.12□□□□□ -2.39
RPL1AP0CX43 snR45snR45 172 nt0.12□□□□□ -2.39
RPL1AP0CX43 GLG1YKR058W 1851 nt0.1□□□□□ -2.39
RPL1AP0CX43 YEL073CYEL073C 324 nt0.09□□□□□ -2.4
RPL1AP0CX43 YMR158W-BYMR158W-B 321 nt0.09□□□□□ -2.4
RPL1AP0CX43 APQ12YIL040W 417 nt0.08□□□□□ -2.4
RPL1AP0CX43 CSE1YGL238W 2883 nt0.05□□□□□ -2.4
RPL1AP0CX43 snR55snR55 98 nt0.05□□□□□ -2.4
RPL1AP0CX43 snR49snR49 165 nt0.05□□□□□ -2.4
RPL1AP0CX43 tF(GAA)QtF(GAA)Q 75 nt0.04□□□□□ -2.4
RPL1AP0CX43 YER181CYER181C 324 nt0.04□□□□□ -2.4
RPL1AP0CX43 YPR010C-AYPR010C-A 219 nt0.04□□□□□ -2.4
RPL1AP0CX43 SDH6YDR379C-A 240 nt0.03□□□□□ -2.4
RPL1AP0CX43 YML099W-AYML099W-A 330 nt0.03□□□□□ -2.4
RPL1AP0CX43 YBR099CYBR099C 384 nt-0.01□□□□□ -2.41
RPL1AP0CX43 YGL041CYGL041C 204 nt-0.02□□□□□ -2.41
RPL1AP0CX43 YPL152W-AYPL152W-A 99 nt-0.02□□□□□ -2.41
RPL1AP0CX43 YDR544CYDR544C 429 nt-0.03□□□□□ -2.41
RPL1AP0CX43 SOV1YMR066W 2697 nt-0.03□□□□□ -2.41
RPL1AP0CX43 RPM2YML091C 3609 nt-0.04□□□□□ -2.42
RPL1AP0CX43 COG6YNL041C 2520 nt-0.05□□□□□ -2.42
RPL1AP0CX43 YOL155W-AYOL155W-A 135 nt-0.05□□□□□ -2.42
RPL1AP0CX43 YBL039C-AYBL039C-A 84 nt-0.06□□□□□ -2.42
RPL1AP0CX43 YOR231C-AYOR231C-A 201 nt-0.09□□□□□ -2.42
RPL1AP0CX43 TFB5YDR079C-A 219 nt-0.1□□□□□ -2.43
RPL1AP0CX43 YGL182CYGL182C 324 nt-0.1□□□□□ -2.43
RPL1AP0CX43 snR128snR128 126 nt-0.11□□□□□ -2.43
RPL1AP0CX43 YBR131C-AYBR131C-A 90 nt-0.11□□□□□ -2.43
RPL1AP0CX43 EST1YLR233C 2100 nt-0.13□□□□□ -2.43
RPL1AP0CX43 YOR314W-AYOR314W-A 111 nt-0.13□□□□□ -2.43
RPL1AP0CX43 snR8snR8 190 nt-0.15□□□□□ -2.43
RPL1AP0CX43 YGL188C-AYGL188C-A 141 nt-0.15□□□□□ -2.43
RPL1AP0CX43 YJL182CYJL182C 318 nt-0.17□□□□□ -2.44
RPL1AP0CX43 YEL014CYEL014C 306 nt-0.18□□□□□ -2.44
RPL1AP0CX43 YGR164WYGR164W 336 nt-0.2□□□□□ -2.44
RPL1AP0CX43 YNL097C-BYNL097C-B 123 nt-0.2□□□□□ -2.44
RPL1AP0CX43 YJL113WYJL113W 4647 nt-0.21□□□□□ -2.44
RPL1AP0CX43 Q0142Q0142 177 nt-0.21□□□□□ -2.44
RPL1AP0CX43 YOR170WYOR170W 306 nt-0.23□□□□□ -2.45
RPL1AP0CX43 YOR302WYOR302W 78 nt-0.23□□□□□ -2.45
RPL1AP0CX43 YOR381W-AYOR381W-A 168 nt-0.23□□□□□ -2.45
RPL1AP0CX43 tM(CAU)Q2tM(CAU)Q2 78 nt-0.27□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms