Protein–RNA interactions for Protein: P0CX35

RPS4A, 40S ribosomal protein S4-A, yeastyeast

Known RBP Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS4AP0CX35 PEP1YBL017C 4740 nt1.81□□□□□ -2.12
RPS4AP0CX35 KAP122YGL016W 3246 nt1.81□□□□□ -2.12
RPS4AP0CX35 YBL071C-BYBL071C-B 99 nt1.81□□□□□ -2.12
RPS4AP0CX35 YLR422WYLR422W 5799 nt1.8□□□□□ -2.12
RPS4AP0CX35 MGA2YIR033W 3342 nt1.8□□□□□ -2.12
RPS4AP0CX35 SKI3YPR189W 4299 nt1.8□□□□□ -2.12
RPS4AP0CX35 RPM2YML091C 3609 nt1.79□□□□□ -2.12
RPS4AP0CX35 RPL26BYGR034W 384 nt1.79□□□□□ -2.12
RPS4AP0CX35 ASE1YOR058C 2658 nt1.78□□□□□ -2.12
RPS4AP0CX35 STO1YMR125W 2586 nt1.78□□□□□ -2.12
RPS4AP0CX35 TMA7YLR262C-A 195 nt1.78□□□□□ -2.12
RPS4AP0CX35 YMR272W-BYMR272W-B 108 nt1.78□□□□□ -2.12
RPS4AP0CX35 SET3YKR029C 2256 nt1.78□□□□□ -2.13
RPS4AP0CX35 ROM2YLR371W 4071 nt1.76□□□□□ -2.13
RPS4AP0CX35 YMR045CYMR045C 5268 nt1.75□□□□□ -2.13
RPS4AP0CX35 WAR1YML076C 2835 nt1.75□□□□□ -2.13
RPS4AP0CX35 YDL073WYDL073W 2955 nt1.74□□□□□ -2.13
RPS4AP0CX35 YDR034C-AYDR034C-A 177 nt1.74□□□□□ -2.13
RPS4AP0CX35 RPS26AYGL189C 360 nt1.74□□□□□ -2.13
RPS4AP0CX35 YBR196C-AYBR196C-A 150 nt1.73□□□□□ -2.13
RPS4AP0CX35 CHS1YNL192W 3396 nt1.72□□□□□ -2.13
RPS4AP0CX35 YHR214C-BYHR214C-B 5382 nt1.71□□□□□ -2.14
RPS4AP0CX35 GEA2YEL022W 4380 nt1.71□□□□□ -2.14
RPS4AP0CX35 MON2YNL297C 4911 nt1.7□□□□□ -2.14
RPS4AP0CX35 YOR093CYOR093C 4947 nt1.7□□□□□ -2.14
RPS4AP0CX35 YBL100W-CYBL100W-C 120 nt1.69□□□□□ -2.14
RPS4AP0CX35 SEC3YER008C 4011 nt1.69□□□□□ -2.14
RPS4AP0CX35 YOL164W-AYOL164W-A 183 nt1.68□□□□□ -2.14
RPS4AP0CX35 CFT1YDR301W 4074 nt1.68□□□□□ -2.14
RPS4AP0CX35 ANS1YHR126C 480 nt1.67□□□□□ -2.14
RPS4AP0CX35 IRC20YLR247C 4671 nt1.67□□□□□ -2.14
RPS4AP0CX35 APL3YBL037W 3078 nt1.66□□□□□ -2.14
RPS4AP0CX35 SWI4YER111C 3282 nt1.66□□□□□ -2.14
RPS4AP0CX35 AZF1YOR113W 2745 nt1.66□□□□□ -2.14
RPS4AP0CX35 YGR240C-AYGR240C-A 201 nt1.66□□□□□ -2.14
RPS4AP0CX35 CDC25YLR310C 4770 nt1.65□□□□□ -2.14
RPS4AP0CX35 SEC10YLR166C 2616 nt1.65□□□□□ -2.15
RPS4AP0CX35 TRM732YMR259C 4263 nt1.65□□□□□ -2.15
RPS4AP0CX35 MEC1YBR136W 7107 nt1.65□□□□□ -2.15
RPS4AP0CX35 NNF2YGR089W 2811 nt1.64□□□□□ -2.15
RPS4AP0CX35 YBR200W-AYBR200W-A 165 nt1.64□□□□□ -2.15
RPS4AP0CX35 PKH3YDR466W 2697 nt1.63□□□□□ -2.15
RPS4AP0CX35 SEC8YPR055W 3198 nt1.63□□□□□ -2.15
RPS4AP0CX35 tT(UGU)HtT(UGU)H 72 nt1.62□□□□□ -2.15
RPS4AP0CX35 BEM3YPL115C 3387 nt1.61□□□□□ -2.15
RPS4AP0CX35 PIK1YNL267W 3201 nt1.61□□□□□ -2.15
RPS4AP0CX35 BRR2YER172C 6492 nt1.61□□□□□ -2.15
RPS4AP0CX35 PMD1YER132C 5262 nt1.6□□□□□ -2.15
RPS4AP0CX35 UBP3YER151C 2739 nt1.6□□□□□ -2.15
RPS4AP0CX35 DNF3YMR162C 4971 nt1.6□□□□□ -2.15
RPS4AP0CX35 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
RPS4AP0CX35 NUP145YGL092W 3954 nt1.6□□□□□ -2.15
RPS4AP0CX35 PRP16YKR086W 3216 nt1.6□□□□□ -2.15
RPS4AP0CX35 tN(GUU)QtN(GUU)Q 71 nt1.59□□□□□ -2.15
RPS4AP0CX35 YLR399W-AYLR399W-A 105 nt1.59□□□□□ -2.15
RPS4AP0CX35 YLR286W-AYLR286W-A 135 nt1.58□□□□□ -2.16
RPS4AP0CX35 NUP188YML103C 4968 nt1.57□□□□□ -2.16
RPS4AP0CX35 NUP192YJL039C 5052 nt1.57□□□□□ -2.16
RPS4AP0CX35 YMR247W-AYMR247W-A 144 nt1.56□□□□□ -2.16
RPS4AP0CX35 YPR160W-AYPR160W-A 81 nt1.56□□□□□ -2.16
RPS4AP0CX35 snR47snR47 99 nt1.56□□□□□ -2.16
RPS4AP0CX35 YSP1YHR155W 3687 nt1.55□□□□□ -2.16
RPS4AP0CX35 GLG1YKR058W 1851 nt1.54□□□□□ -2.16
RPS4AP0CX35 ORC3YLL004W 1851 nt1.54□□□□□ -2.16
RPS4AP0CX35 BST1YFL025C 3090 nt1.54□□□□□ -2.16
RPS4AP0CX35 CDC39YCR093W 6327 nt1.54□□□□□ -2.16
RPS4AP0CX35 snR53snR53 91 nt1.54□□□□□ -2.16
RPS4AP0CX35 VPS15YBR097W 4365 nt1.53□□□□□ -2.16
RPS4AP0CX35 ULP2YIL031W 3105 nt1.51□□□□□ -2.17
RPS4AP0CX35 FIG2YCR089W 4830 nt1.51□□□□□ -2.17
RPS4AP0CX35 tD(GUC)QtD(GUC)Q 75 nt1.5□□□□□ -2.17
RPS4AP0CX35 CAT8YMR280C 4302 nt1.49□□□□□ -2.17
RPS4AP0CX35 MSN5YDR335W 3675 nt1.49□□□□□ -2.17
RPS4AP0CX35 EST2YLR318W 2655 nt1.48□□□□□ -2.17
RPS4AP0CX35 MSH3YCR092C 3057 nt1.47□□□□□ -2.17
RPS4AP0CX35 snR64snR64 101 nt1.46□□□□□ -2.18
RPS4AP0CX35 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
RPS4AP0CX35 EST1YLR233C 2100 nt1.45□□□□□ -2.18
RPS4AP0CX35 snR69snR69 101 nt1.43□□□□□ -2.18
RPS4AP0CX35 YLR299C-AYLR299C-A 93 nt1.43□□□□□ -2.18
RPS4AP0CX35 YPL060C-AYPL060C-A 3315 nt1.42□□□□□ -2.18
RPS4AP0CX35 CCH1YGR217W 6120 nt1.42□□□□□ -2.18
RPS4AP0CX35 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
RPS4AP0CX35 CSE1YGL238W 2883 nt1.41□□□□□ -2.18
RPS4AP0CX35 CLU1YMR012W 3834 nt1.4□□□□□ -2.18
RPS4AP0CX35 SXM1YDR395W 2835 nt1.39□□□□□ -2.19
RPS4AP0CX35 YDL159C-BYDL159C-B 177 nt1.39□□□□□ -2.19
RPS4AP0CX35 PET127YOR017W 2403 nt1.39□□□□□ -2.19
RPS4AP0CX35 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
RPS4AP0CX35 HUG1YML058W-A 207 nt1.35□□□□□ -2.19
RPS4AP0CX35 RDS3YPR094W 324 nt1.35□□□□□ -2.19
RPS4AP0CX35 SSK2YNR031C 4740 nt1.35□□□□□ -2.19
RPS4AP0CX35 NST1YNL091W 3723 nt1.33□□□□□ -2.2
RPS4AP0CX35 YKL225WYKL225W 348 nt1.33□□□□□ -2.2
RPS4AP0CX35 snR50snR50 90 nt1.33□□□□□ -2.2
RPS4AP0CX35 YLL006W-AYLL006W-A 177 nt1.32□□□□□ -2.2
RPS4AP0CX35 HKR1YDR420W 5409 nt1.32□□□□□ -2.2
RPS4AP0CX35 FYV8YGR196C 2454 nt1.31□□□□□ -2.2
RPS4AP0CX35 YGR130CYGR130C 2451 nt1.3□□□□□ -2.2
RPS4AP0CX35 YML054C-AYML054C-A 159 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 56.3 ms