Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 SKI7YOR076C 2244 nt-1.51□□□□□ -2.65
TY1B-PR2P0C2J0 snR81snR81 201 nt-1.51□□□□□ -2.65
TY1B-PR2P0C2J0 YJR087WYJR087W 351 nt-1.51□□□□□ -2.65
TY1B-PR2P0C2J0 YEL020C-BYEL020C-B 198 nt-1.52□□□□□ -2.65
TY1B-PR2P0C2J0 YFL012WYFL012W 447 nt-1.52□□□□□ -2.65
TY1B-PR2P0C2J0 YOR170WYOR170W 306 nt-1.52□□□□□ -2.65
TY1B-PR2P0C2J0 YLR456WYLR456W 615 nt-1.54□□□□□ -2.66
TY1B-PR2P0C2J0 PMP2YEL017C-A 132 nt-1.55□□□□□ -2.66
TY1B-PR2P0C2J0 snR74snR74 88 nt-1.56□□□□□ -2.66
TY1B-PR2P0C2J0 CBS1YDL069C 690 nt-1.56□□□□□ -2.66
TY1B-PR2P0C2J0 YOR121CYOR121C 306 nt-1.56□□□□□ -2.66
TY1B-PR2P0C2J0 VPS20YMR077C 666 nt-1.59□□□□□ -2.66
TY1B-PR2P0C2J0 YIL029CYIL029C 429 nt-1.61□□□□□ -2.67
TY1B-PR2P0C2J0 YDL016CYDL016C 303 nt-1.63□□□□□ -2.67
TY1B-PR2P0C2J0 YER090C-AYER090C-A 90 nt-1.63□□□□□ -2.67
TY1B-PR2P0C2J0 YHR125WYHR125W 306 nt-1.64□□□□□ -2.67
TY1B-PR2P0C2J0 JLP2YMR132C 627 nt-1.64□□□□□ -2.67
TY1B-PR2P0C2J0 snR77snR77 88 nt-1.64□□□□□ -2.67
TY1B-PR2P0C2J0 YGR174W-AYGR174W-A 87 nt-1.65□□□□□ -2.67
TY1B-PR2P0C2J0 RPS27BYHR021C 249 nt-1.66□□□□□ -2.68
TY1B-PR2P0C2J0 CDC65tQ(CUG)M 72 nt-1.67□□□□□ -2.68
TY1B-PR2P0C2J0 PRM3YPL192C 402 nt-1.67□□□□□ -2.68
TY1B-PR2P0C2J0 BI2Q0110 1272 nt-1.67□□□□□ -2.68
TY1B-PR2P0C2J0 PCC1YKR095W-A 267 nt-1.67□□□□□ -2.68
TY1B-PR2P0C2J0 TOM22YNL131W 459 nt-1.68□□□□□ -2.68
TY1B-PR2P0C2J0 YGR069WYGR069W 336 nt-1.7□□□□□ -2.68
TY1B-PR2P0C2J0 YJL077W-AYJL077W-A 87 nt-1.7□□□□□ -2.68
TY1B-PR2P0C2J0 YPR016W-AYPR016W-A 261 nt-1.7□□□□□ -2.68
TY1B-PR2P0C2J0 YBR126W-BYBR126W-B 144 nt-1.7□□□□□ -2.68
TY1B-PR2P0C2J0 tQ(UUG)QtQ(UUG)Q 76 nt-1.71□□□□□ -2.68
TY1B-PR2P0C2J0 YAR047CYAR047C 321 nt-1.71□□□□□ -2.68
TY1B-PR2P0C2J0 YLL019W-AYLL019W-A 93 nt-1.72□□□□□ -2.69
TY1B-PR2P0C2J0 YAF9YNL107W 681 nt-1.72□□□□□ -2.69
TY1B-PR2P0C2J0 CSE2YNR010W 450 nt-1.72□□□□□ -2.69
TY1B-PR2P0C2J0 GPI15YNL038W 690 nt-1.73□□□□□ -2.69
TY1B-PR2P0C2J0 YNL266WYNL266W 420 nt-1.74□□□□□ -2.69
TY1B-PR2P0C2J0 YDR544CYDR544C 429 nt-1.75□□□□□ -2.69
TY1B-PR2P0C2J0 YNL205CYNL205C 423 nt-1.75□□□□□ -2.69
TY1B-PR2P0C2J0 YMR193C-AYMR193C-A 387 nt-1.77□□□□□ -2.69
TY1B-PR2P0C2J0 YOR293C-AYOR293C-A 150 nt-1.77□□□□□ -2.69
TY1B-PR2P0C2J0 YLR412C-AYLR412C-A 207 nt-1.77□□□□□ -2.69
TY1B-PR2P0C2J0 RDS3YPR094W 324 nt-1.79□□□□□ -2.7
TY1B-PR2P0C2J0 YOL166W-AYOL166W-A 156 nt-1.8□□□□□ -2.7
TY1B-PR2P0C2J0 YGR240C-AYGR240C-A 201 nt-1.81□□□□□ -2.7
TY1B-PR2P0C2J0 YLR202CYLR202C 327 nt-1.81□□□□□ -2.7
TY1B-PR2P0C2J0 YBL039C-AYBL039C-A 84 nt-1.83□□□□□ -2.7
TY1B-PR2P0C2J0 YOR314W-AYOR314W-A 111 nt-1.84□□□□□ -2.7
TY1B-PR2P0C2J0 YGL149WYGL149W 306 nt-1.85□□□□□ -2.7
TY1B-PR2P0C2J0 YIL115W-AYIL115W-A 372 nt-1.85□□□□□ -2.7
TY1B-PR2P0C2J0 YJL197C-AYJL197C-A 282 nt-1.87□□□□□ -2.71
TY1B-PR2P0C2J0 snR39BsnR39B 96 nt-1.87□□□□□ -2.71
TY1B-PR2P0C2J0 snR54snR54 86 nt-1.87□□□□□ -2.71
TY1B-PR2P0C2J0 snR50snR50 90 nt-1.89□□□□□ -2.71
TY1B-PR2P0C2J0 YLR269CYLR269C 351 nt-1.9□□□□□ -2.71
TY1B-PR2P0C2J0 YML054C-AYML054C-A 159 nt-1.9□□□□□ -2.71
TY1B-PR2P0C2J0 YER006C-AYER006C-A 318 nt-1.98□□□□□ -2.73
TY1B-PR2P0C2J0 YAL066WYAL066W 309 nt-1.98□□□□□ -2.73
TY1B-PR2P0C2J0 YOR072W-BYOR072W-B 162 nt-1.98□□□□□ -2.73
TY1B-PR2P0C2J0 YDR048CYDR048C 315 nt-2□□□□□ -2.73
TY1B-PR2P0C2J0 YDR543CYDR543C 300 nt-2□□□□□ -2.73
TY1B-PR2P0C2J0 YAL068W-AYAL068W-A 255 nt-2□□□□□ -2.73
TY1B-PR2P0C2J0 snR67snR67 82 nt-2.02□□□□□ -2.73
TY1B-PR2P0C2J0 snR69snR69 101 nt-2.03□□□□□ -2.73
TY1B-PR2P0C2J0 EAF6YJR082C 342 nt-2.03□□□□□ -2.73
TY1B-PR2P0C2J0 YMR315W-AYMR315W-A 108 nt-2.03□□□□□ -2.73
TY1B-PR2P0C2J0 YDR102CYDR102C 333 nt-2.03□□□□□ -2.73
TY1B-PR2P0C2J0 YJL047C-AYJL047C-A 135 nt-2.03□□□□□ -2.73
TY1B-PR2P0C2J0 YOR309CYOR309C 381 nt-2.04□□□□□ -2.74
TY1B-PR2P0C2J0 HMRA1YCR097W 381 nt-2.05□□□□□ -2.74
TY1B-PR2P0C2J0 YER137W-AYER137W-A 306 nt-2.05□□□□□ -2.74
TY1B-PR2P0C2J0 YBR182C-AYBR182C-A 195 nt-2.05□□□□□ -2.74
TY1B-PR2P0C2J0 MPC1YGL080W 393 nt-2.06□□□□□ -2.74
TY1B-PR2P0C2J0 YLR342W-AYLR342W-A 174 nt-2.07□□□□□ -2.74
TY1B-PR2P0C2J0 YMR172C-AYMR172C-A 384 nt-2.07□□□□□ -2.74
TY1B-PR2P0C2J0 Q0142Q0142 177 nt-2.08□□□□□ -2.74
TY1B-PR2P0C2J0 YML099W-AYML099W-A 330 nt-2.08□□□□□ -2.74
TY1B-PR2P0C2J0 YKL063CYKL063C 504 nt-2.1□□□□□ -2.75
TY1B-PR2P0C2J0 YOR008C-AYOR008C-A 225 nt-2.1□□□□□ -2.75
TY1B-PR2P0C2J0 CSN9YDR179C 489 nt-2.11□□□□□ -2.75
TY1B-PR2P0C2J0 YBR196C-AYBR196C-A 150 nt-2.11□□□□□ -2.75
TY1B-PR2P0C2J0 YDL158CYDL158C 309 nt-2.13□□□□□ -2.75
TY1B-PR2P0C2J0 tD(GUC)QtD(GUC)Q 75 nt-2.13□□□□□ -2.75
TY1B-PR2P0C2J0 YER097WYER097W 330 nt-2.17□□□□□ -2.76
TY1B-PR2P0C2J0 YFL019CYFL019C 354 nt-2.18□□□□□ -2.76
TY1B-PR2P0C2J0 YOR376W-AYOR376W-A 156 nt-2.21□□□□□ -2.76
TY1B-PR2P0C2J0 YFL032WYFL032W 321 nt-2.22□□□□□ -2.76
TY1B-PR2P0C2J0 YOL038C-AYOL038C-A 96 nt-2.24□□□□□ -2.77
TY1B-PR2P0C2J0 YPR197CYPR197C 564 nt-2.24□□□□□ -2.77
TY1B-PR2P0C2J0 YGR146C-AYGR146C-A 162 nt-2.26□□□□□ -2.77
TY1B-PR2P0C2J0 YOL013W-BYOL013W-B 291 nt-2.26□□□□□ -2.77
TY1B-PR2P0C2J0 YNL028WYNL028W 318 nt-2.26□□□□□ -2.77
TY1B-PR2P0C2J0 YOL083C-AYOL083C-A 141 nt-2.27□□□□□ -2.77
TY1B-PR2P0C2J0 snR60snR60 104 nt-2.3□□□□□ -2.78
TY1B-PR2P0C2J0 YDL159C-BYDL159C-B 177 nt-2.31□□□□□ -2.78
TY1B-PR2P0C2J0 YLR286W-AYLR286W-A 135 nt-2.32□□□□□ -2.78
TY1B-PR2P0C2J0 YNL324WYNL324W 396 nt-2.33□□□□□ -2.78
TY1B-PR2P0C2J0 YOR316C-AYOR316C-A 210 nt-2.33□□□□□ -2.78
TY1B-PR2P0C2J0 YMR001C-AYMR001C-A 231 nt-2.34□□□□□ -2.78
TY1B-PR2P0C2J0 YDR524W-CYDR524W-C 90 nt-2.35□□□□□ -2.79
TY1B-PR2P0C2J0 tM(CAU)Q2tM(CAU)Q2 78 nt-2.35□□□□□ -2.79
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms