Protein–RNA interactions for Protein: P07258

CPA1, Carbamoyl-phosphate synthase arginine-specific small chain, yeastyeast

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CPA1P07258 YPR197CYPR197C 564 nt0.14□□□□□ -2.39
CPA1P07258 YNL054W-BYNL054W-B 5250 nt0.14□□□□□ -2.39
CPA1P07258 YJL197C-AYJL197C-A 282 nt0.13□□□□□ -2.39
CPA1P07258 YCR022CYCR022C 345 nt0.12□□□□□ -2.39
CPA1P07258 YGR069WYGR069W 336 nt0.12□□□□□ -2.39
CPA1P07258 RCO1YMR075W 2055 nt0.11□□□□□ -2.39
CPA1P07258 HTL1YCR020W-B 237 nt0.11□□□□□ -2.39
CPA1P07258 snR74snR74 88 nt0.11□□□□□ -2.39
CPA1P07258 YEL020C-BYEL020C-B 198 nt0.11□□□□□ -2.39
CPA1P07258 BLI1YKL061W 342 nt0.11□□□□□ -2.39
CPA1P07258 YPL038W-AYPL038W-A 192 nt0.11□□□□□ -2.39
CPA1P07258 THO2YNL139C 4794 nt0.11□□□□□ -2.39
CPA1P07258 YER053C-AYER053C-A 114 nt0.1□□□□□ -2.39
CPA1P07258 YGL149WYGL149W 306 nt0.1□□□□□ -2.39
CPA1P07258 YDR413CYDR413C 576 nt0.09□□□□□ -2.4
CPA1P07258 ATP6Q0085 780 nt0.09□□□□□ -2.4
CPA1P07258 YFL063WYFL063W 456 nt0.09□□□□□ -2.4
CPA1P07258 YLL006W-AYLL006W-A 177 nt0.09□□□□□ -2.4
CPA1P07258 YNL028WYNL028W 318 nt0.09□□□□□ -2.4
CPA1P07258 YPR012WYPR012W 255 nt0.09□□□□□ -2.4
CPA1P07258 NIP1YMR309C 2439 nt0.09□□□□□ -2.4
CPA1P07258 YCR038W-AYCR038W-A 126 nt0.08□□□□□ -2.4
CPA1P07258 SNU13YEL026W 381 nt0.08□□□□□ -2.4
CPA1P07258 YOR072W-BYOR072W-B 162 nt0.08□□□□□ -2.4
CPA1P07258 BUL2YML111W 2763 nt0.08□□□□□ -2.4
CPA1P07258 RAD61YDR014W 1944 nt0.07□□□□□ -2.4
CPA1P07258 YHR131W-AYHR131W-A 246 nt0.07□□□□□ -2.4
CPA1P07258 YLR120W-AYLR120W-A 102 nt0.07□□□□□ -2.4
CPA1P07258 YBL100W-BYBL100W-B 5313 nt0.07□□□□□ -2.4
CPA1P07258 YDL240C-AYDL240C-A 138 nt0.06□□□□□ -2.4
CPA1P07258 COX12YLR038C 252 nt0.06□□□□□ -2.4
CPA1P07258 YDR183C-AYDR183C-A 258 nt0.05□□□□□ -2.4
CPA1P07258 YDR366CYDR366C 399 nt0.05□□□□□ -2.4
CPA1P07258 GIM4YEL003W 336 nt0.05□□□□□ -2.4
CPA1P07258 YER097WYER097W 330 nt0.05□□□□□ -2.4
CPA1P07258 YOR186C-AYOR186C-A 210 nt0.05□□□□□ -2.4
CPA1P07258 YBR072C-AYBR072C-A 162 nt0.05□□□□□ -2.4
CPA1P07258 YDR544CYDR544C 429 nt0.04□□□□□ -2.4
CPA1P07258 YEL073CYEL073C 324 nt0.04□□□□□ -2.4
CPA1P07258 YLR041WYLR041W 321 nt0.04□□□□□ -2.4
CPA1P07258 YGL052WYGL052W 306 nt0.03□□□□□ -2.4
CPA1P07258 YKU70YMR284W 1809 nt0.02□□□□□ -2.41
CPA1P07258 CSE1YGL238W 2883 nt0.02□□□□□ -2.41
CPA1P07258 HMRA1YCR097W 381 nt0.01□□□□□ -2.41
CPA1P07258 YHR175W-AYHR175W-A 150 nt0.01□□□□□ -2.41
CPA1P07258 YKL118WYKL118W 312 nt0.01□□□□□ -2.41
CPA1P07258 YMR172C-AYMR172C-A 384 nt0□□□□□ -2.41
CPA1P07258 SDH6YDR379C-A 240 nt-0.01□□□□□ -2.41
CPA1P07258 snR56snR56 88 nt-0.02□□□□□ -2.41
CPA1P07258 YIL002W-AYIL002W-A 210 nt-0.02□□□□□ -2.41
CPA1P07258 APQ12YIL040W 417 nt-0.02□□□□□ -2.41
CPA1P07258 YKL100W-AYKL100W-A 90 nt-0.02□□□□□ -2.41
CPA1P07258 YMR158W-BYMR158W-B 321 nt-0.02□□□□□ -2.41
CPA1P07258 YPR010C-AYPR010C-A 219 nt-0.02□□□□□ -2.41
CPA1P07258 snR45snR45 172 nt-0.02□□□□□ -2.41
CPA1P07258 UTP8YGR128C 2142 nt-0.03□□□□□ -2.41
CPA1P07258 tR(ACG)Q2tR(ACG)Q2 74 nt-0.03□□□□□ -2.41
CPA1P07258 SOV1YMR066W 2697 nt-0.03□□□□□ -2.41
CPA1P07258 YLR232WYLR232W 348 nt-0.04□□□□□ -2.42
CPA1P07258 YNL277W-AYNL277W-A 189 nt-0.04□□□□□ -2.42
CPA1P07258 TAH1YCR060W 336 nt-0.05□□□□□ -2.42
CPA1P07258 YGL041CYGL041C 204 nt-0.06□□□□□ -2.42
CPA1P07258 YBR131C-AYBR131C-A 90 nt-0.06□□□□□ -2.42
CPA1P07258 RPL39YJL189W 156 nt-0.07□□□□□ -2.42
CPA1P07258 YEL014CYEL014C 306 nt-0.08□□□□□ -2.42
CPA1P07258 YIR030W-AYIR030W-A 384 nt-0.08□□□□□ -2.42
CPA1P07258 YBR099CYBR099C 384 nt-0.08□□□□□ -2.42
CPA1P07258 EST1YLR233C 2100 nt-0.08□□□□□ -2.42
CPA1P07258 PRP39YML046W 1890 nt-0.09□□□□□ -2.42
CPA1P07258 YOR008C-AYOR008C-A 225 nt-0.09□□□□□ -2.42
CPA1P07258 snR128snR128 126 nt-0.09□□□□□ -2.42
CPA1P07258 YBR182C-AYBR182C-A 195 nt-0.09□□□□□ -2.42
CPA1P07258 GLG1YKR058W 1851 nt-0.1□□□□□ -2.43
CPA1P07258 YBL039C-AYBL039C-A 84 nt-0.11□□□□□ -2.43
CPA1P07258 COG6YNL041C 2520 nt-0.11□□□□□ -2.43
CPA1P07258 snR8snR8 190 nt-0.12□□□□□ -2.43
CPA1P07258 tF(GAA)QtF(GAA)Q 75 nt-0.13□□□□□ -2.43
CPA1P07258 YML099W-AYML099W-A 330 nt-0.14□□□□□ -2.43
CPA1P07258 YGL182CYGL182C 324 nt-0.16□□□□□ -2.44
CPA1P07258 snR49snR49 165 nt-0.16□□□□□ -2.44
CPA1P07258 snR55snR55 98 nt-0.17□□□□□ -2.44
CPA1P07258 YDR210WYDR210W 228 nt-0.17□□□□□ -2.44
CPA1P07258 YJL182CYJL182C 318 nt-0.17□□□□□ -2.44
CPA1P07258 YDR524W-CYDR524W-C 90 nt-0.18□□□□□ -2.44
CPA1P07258 YPL152W-AYPL152W-A 99 nt-0.19□□□□□ -2.44
CPA1P07258 snR65snR65 100 nt-0.2□□□□□ -2.44
CPA1P07258 YGR164WYGR164W 336 nt-0.2□□□□□ -2.44
CPA1P07258 YOR314W-AYOR314W-A 111 nt-0.2□□□□□ -2.44
CPA1P07258 YOR302WYOR302W 78 nt-0.21□□□□□ -2.44
CPA1P07258 YER181CYER181C 324 nt-0.22□□□□□ -2.44
CPA1P07258 YNL097C-BYNL097C-B 123 nt-0.23□□□□□ -2.45
CPA1P07258 YOL155W-AYOL155W-A 135 nt-0.23□□□□□ -2.45
CPA1P07258 YOR381W-AYOR381W-A 168 nt-0.23□□□□□ -2.45
CPA1P07258 SBH2YER019C-A 267 nt-0.24□□□□□ -2.45
CPA1P07258 YOR231C-AYOR231C-A 201 nt-0.25□□□□□ -2.45
CPA1P07258 snR80snR80 171 nt-0.26□□□□□ -2.45
CPA1P07258 TFB5YDR079C-A 219 nt-0.27□□□□□ -2.45
CPA1P07258 tM(CAU)Q2tM(CAU)Q2 78 nt-0.27□□□□□ -2.45
CPA1P07258 tQ(UUG)QtQ(UUG)Q 76 nt-0.29□□□□□ -2.46
CPA1P07258 YOR329W-AYOR329W-A 210 nt-0.29□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms