Protein–RNA interactions for Protein: P02407

RPS17A, 40S ribosomal protein S17-A, yeastyeast

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS17AP02407 SNU13YEL026W 381 nt1.24□□□□□ -2.21
RPS17AP02407 tH(GUG)E1tH(GUG)E1 72 nt1.24□□□□□ -2.21
RPS17AP02407 tH(GUG)E2tH(GUG)E2 72 nt1.24□□□□□ -2.21
RPS17AP02407 tH(GUG)G1tH(GUG)G1 72 nt1.24□□□□□ -2.21
RPS17AP02407 tH(GUG)G2tH(GUG)G2 72 nt1.24□□□□□ -2.21
RPS17AP02407 tH(GUG)HtH(GUG)H 72 nt1.24□□□□□ -2.21
RPS17AP02407 tH(GUG)KtH(GUG)K 72 nt1.24□□□□□ -2.21
RPS17AP02407 tH(GUG)MtH(GUG)M 72 nt1.24□□□□□ -2.21
RPS17AP02407 YGL182CYGL182C 324 nt1.24□□□□□ -2.21
RPS17AP02407 PRP16YKR086W 3216 nt1.23□□□□□ -2.21
RPS17AP02407 snR48snR48 113 nt1.23□□□□□ -2.21
RPS17AP02407 YBL039C-AYBL039C-A 84 nt1.22□□□□□ -2.21
RPS17AP02407 YBL053WYBL053W 375 nt1.22□□□□□ -2.21
RPS17AP02407 TAH1YCR060W 336 nt1.21□□□□□ -2.22
RPS17AP02407 YGR164WYGR164W 336 nt1.21□□□□□ -2.22
RPS17AP02407 YLR399W-AYLR399W-A 105 nt1.21□□□□□ -2.22
RPS17AP02407 RAD9YDR217C 3930 nt1.2□□□□□ -2.22
RPS17AP02407 YNL170WYNL170W 396 nt1.19□□□□□ -2.22
RPS17AP02407 YOR314W-AYOR314W-A 111 nt1.18□□□□□ -2.22
RPS17AP02407 YPR160W-AYPR160W-A 81 nt1.18□□□□□ -2.22
RPS17AP02407 YLR232WYLR232W 348 nt1.17□□□□□ -2.22
RPS17AP02407 IML1YJR138W 4755 nt1.16□□□□□ -2.22
RPS17AP02407 SDH6YDR379C-A 240 nt1.16□□□□□ -2.22
RPS17AP02407 CHS6YJL099W 2241 nt1.15□□□□□ -2.23
RPS17AP02407 YHR131W-AYHR131W-A 246 nt1.15□□□□□ -2.23
RPS17AP02407 YGR130CYGR130C 2451 nt1.15□□□□□ -2.23
RPS17AP02407 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
RPS17AP02407 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
RPS17AP02407 tL(UAA)QtL(UAA)Q 85 nt1.12□□□□□ -2.23
RPS17AP02407 tN(GUU)QtN(GUU)Q 71 nt1.11□□□□□ -2.23
RPS17AP02407 SIP4YJL089W 2490 nt1.09□□□□□ -2.23
RPS17AP02407 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
RPS17AP02407 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
RPS17AP02407 YOR329W-AYOR329W-A 210 nt1.08□□□□□ -2.24
RPS17AP02407 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
RPS17AP02407 RPM2YML091C 3609 nt1.07□□□□□ -2.24
RPS17AP02407 YSP1YHR155W 3687 nt1.07□□□□□ -2.24
RPS17AP02407 UBP3YER151C 2739 nt1.07□□□□□ -2.24
RPS17AP02407 NST1YNL091W 3723 nt1.07□□□□□ -2.24
RPS17AP02407 BEM3YPL115C 3387 nt1.07□□□□□ -2.24
RPS17AP02407 YDR544CYDR544C 429 nt1.06□□□□□ -2.24
RPS17AP02407 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
RPS17AP02407 YDL073WYDL073W 2955 nt1.04□□□□□ -2.24
RPS17AP02407 tM(CAU)Q2tM(CAU)Q2 78 nt1.04□□□□□ -2.24
RPS17AP02407 QCR9YGR183C 201 nt1.04□□□□□ -2.24
RPS17AP02407 OST4YDL232W 111 nt1.03□□□□□ -2.24
RPS17AP02407 BEM2YER155C 6504 nt1.02□□□□□ -2.25
RPS17AP02407 YNL067W-BYNL067W-B 141 nt1.02□□□□□ -2.25
RPS17AP02407 COG6YNL041C 2520 nt1□□□□□ -2.25
RPS17AP02407 DOP1YDR141C 5097 nt1□□□□□ -2.25
RPS17AP02407 RKR1YMR247C 4689 nt1□□□□□ -2.25
RPS17AP02407 YPR117WYPR117W 7470 nt0.99□□□□□ -2.25
RPS17AP02407 snR39BsnR39B 96 nt0.99□□□□□ -2.25
RPS17AP02407 BUD3YCL014W 4911 nt0.98□□□□□ -2.25
RPS17AP02407 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
RPS17AP02407 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
RPS17AP02407 ULP2YIL031W 3105 nt0.95□□□□□ -2.26
RPS17AP02407 YDR210WYDR210W 228 nt0.95□□□□□ -2.26
RPS17AP02407 YBR072C-AYBR072C-A 162 nt0.95□□□□□ -2.26
RPS17AP02407 YCL001W-BYCL001W-B 255 nt0.95□□□□□ -2.26
RPS17AP02407 GLG1YKR058W 1851 nt0.93□□□□□ -2.26
RPS17AP02407 YCR095W-AYCR095W-A 159 nt0.93□□□□□ -2.26
RPS17AP02407 SEC1YDR164C 2175 nt0.93□□□□□ -2.26
RPS17AP02407 YJL127W-AYJL127W-A 117 nt0.92□□□□□ -2.26
RPS17AP02407 YGR146C-AYGR146C-A 162 nt0.9□□□□□ -2.27
RPS17AP02407 YLL006W-AYLL006W-A 177 nt0.9□□□□□ -2.27
RPS17AP02407 NNF2YGR089W 2811 nt0.9□□□□□ -2.27
RPS17AP02407 SOM1YEL059C-A 225 nt0.89□□□□□ -2.27
RPS17AP02407 EMT1tM(CAU)D 73 nt0.89□□□□□ -2.27
RPS17AP02407 EMT5tM(CAU)J1 73 nt0.89□□□□□ -2.27
RPS17AP02407 EMT3tM(CAU)J2 73 nt0.89□□□□□ -2.27
RPS17AP02407 EMT4tM(CAU)M 73 nt0.89□□□□□ -2.27
RPS17AP02407 EMT2tM(CAU)O2 73 nt0.89□□□□□ -2.27
RPS17AP02407 LTE1YAL024C 4308 nt0.88□□□□□ -2.27
RPS17AP02407 PAU24YBR301W 363 nt0.84□□□□□ -2.27
RPS17AP02407 YIL071W-AYIL071W-A 477 nt0.83□□□□□ -2.28
RPS17AP02407 YNL205CYNL205C 423 nt0.82□□□□□ -2.28
RPS17AP02407 YBR099CYBR099C 384 nt0.82□□□□□ -2.28
RPS17AP02407 YOR192C-BYOR192C-B 5313 nt0.81□□□□□ -2.28
RPS17AP02407 NIP1YMR309C 2439 nt0.8□□□□□ -2.28
RPS17AP02407 BUL2YML111W 2763 nt0.8□□□□□ -2.28
RPS17AP02407 PET111YMR257C 2403 nt0.8□□□□□ -2.28
RPS17AP02407 STF2YGR008C 255 nt0.77□□□□□ -2.29
RPS17AP02407 Q0143Q0143 153 nt0.77□□□□□ -2.29
RPS17AP02407 CSE1YGL238W 2883 nt0.77□□□□□ -2.29
RPS17AP02407 YIL142C-AYIL142C-A 333 nt0.76□□□□□ -2.29
RPS17AP02407 BIR1YJR089W 2865 nt0.76□□□□□ -2.29
RPS17AP02407 RPS26AYGL189C 360 nt0.75□□□□□ -2.29
RPS17AP02407 PAU12YGR294W 363 nt0.75□□□□□ -2.29
RPS17AP02407 YDR371C-AYDR371C-A 105 nt0.74□□□□□ -2.29
RPS17AP02407 HUG1YML058W-A 207 nt0.74□□□□□ -2.29
RPS17AP02407 MLP1YKR095W 5628 nt0.71□□□□□ -2.3
RPS17AP02407 YPL060C-AYPL060C-A 3315 nt0.71□□□□□ -2.3
RPS17AP02407 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
RPS17AP02407 YNL266WYNL266W 420 nt0.69□□□□□ -2.3
RPS17AP02407 PMP2YEL017C-A 132 nt0.67□□□□□ -2.3
RPS17AP02407 tT(AGU)BtT(AGU)B 73 nt0.67□□□□□ -2.3
RPS17AP02407 tT(AGU)CtT(AGU)C 73 nt0.67□□□□□ -2.3
RPS17AP02407 tT(AGU)DtT(AGU)D 73 nt0.67□□□□□ -2.3
RPS17AP02407 tT(AGU)HtT(AGU)H 73 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 57 ms