Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC31.35■■■□□ 2.61
ARID3CA6NKF2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
ARID3CA6NKF2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC31.35■■■□□ 2.61
ARID3CA6NKF2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC31.35■■■□□ 2.61
ARID3CA6NKF2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC31.35■■■□□ 2.61
ARID3CA6NKF2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC31.35■■■□□ 2.61
ARID3CA6NKF2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ARID3CA6NKF2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 Z98882.1-201ENST00000622160 2253 ntBASIC31.34■■■□□ 2.61
ARID3CA6NKF2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.34■■■□□ 2.61
ARID3CA6NKF2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARID3CA6NKF2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 H19-201ENST00000411754 1788 ntTSL 5 BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARID3CA6NKF2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ARID3CA6NKF2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 AC011506.1-201ENST00000474329 610 ntBASIC31.3■■■□□ 2.6
ARID3CA6NKF2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC31.3■■■□□ 2.6
ARID3CA6NKF2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 HLA-G-202ENST00000376815 851 ntBASIC31.29■■■□□ 2.6
ARID3CA6NKF2 HLA-G-203ENST00000376818 1127 ntBASIC31.29■■■□□ 2.6
ARID3CA6NKF2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 ATP5G1P1-201ENST00000448724 379 ntBASIC31.29■■■□□ 2.6
ARID3CA6NKF2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 FBXW4P1-201ENST00000426721 2239 ntBASIC31.29■■■□□ 2.6
ARID3CA6NKF2 ECEL1P1-201ENST00000373592 1742 ntBASIC31.29■■■□□ 2.6
ARID3CA6NKF2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
ARID3CA6NKF2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 LIN28AP1-201ENST00000429574 405 ntBASIC31.28■■■□□ 2.6
ARID3CA6NKF2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARID3CA6NKF2 AC121338.2-201ENST00000622535 1744 ntBASIC31.27■■■□□ 2.6
ARID3CA6NKF2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARID3CA6NKF2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARID3CA6NKF2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARID3CA6NKF2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC31.27■■■□□ 2.6
ARID3CA6NKF2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC31.27■■■□□ 2.6
ARID3CA6NKF2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
ARID3CA6NKF2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC31.27■■■□□ 2.6
ARID3CA6NKF2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms