Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 RPL33BYOR234C 324 nt1.44□□□□□ -2.18
BRE1Q07457 WAR1YML076C 2835 nt1.44□□□□□ -2.18
BRE1Q07457 STF2YGR008C 255 nt1.42□□□□□ -2.18
BRE1Q07457 YBR064WYBR064W 429 nt1.42□□□□□ -2.18
BRE1Q07457 AHC1YOR023C 1701 nt1.42□□□□□ -2.18
BRE1Q07457 YGL188C-AYGL188C-A 141 nt1.41□□□□□ -2.18
BRE1Q07457 tV(UAC)BtV(UAC)B 74 nt1.41□□□□□ -2.18
BRE1Q07457 tV(UAC)DtV(UAC)D 74 nt1.41□□□□□ -2.18
BRE1Q07457 YMR172C-AYMR172C-A 384 nt1.41□□□□□ -2.18
BRE1Q07457 YOR015WYOR015W 360 nt1.41□□□□□ -2.18
BRE1Q07457 YPR092WYPR092W 306 nt1.41□□□□□ -2.18
BRE1Q07457 snR55snR55 98 nt1.4□□□□□ -2.19
BRE1Q07457 snR8snR8 190 nt1.4□□□□□ -2.19
BRE1Q07457 YOR072W-BYOR072W-B 162 nt1.39□□□□□ -2.19
BRE1Q07457 NST1YNL091W 3723 nt1.39□□□□□ -2.19
BRE1Q07457 ROM2YLR371W 4071 nt1.38□□□□□ -2.19
BRE1Q07457 EAF1YDR359C 2949 nt1.38□□□□□ -2.19
BRE1Q07457 YMR307C-AYMR307C-A 195 nt1.38□□□□□ -2.19
BRE1Q07457 SGF11YPL047W 300 nt1.38□□□□□ -2.19
BRE1Q07457 SIP4YJL089W 2490 nt1.38□□□□□ -2.19
BRE1Q07457 HUG1YML058W-A 207 nt1.37□□□□□ -2.19
BRE1Q07457 YOL155W-AYOL155W-A 135 nt1.37□□□□□ -2.19
BRE1Q07457 GEA2YEL022W 4380 nt1.36□□□□□ -2.19
BRE1Q07457 TTI1YKL033W 3117 nt1.36□□□□□ -2.19
BRE1Q07457 OLI1Q0130 231 nt1.36□□□□□ -2.19
BRE1Q07457 APL1YJR005W 2103 nt1.33□□□□□ -2.2
BRE1Q07457 MDS3YGL197W 4464 nt1.33□□□□□ -2.2
BRE1Q07457 PAA1YDR071C 576 nt1.32□□□□□ -2.2
BRE1Q07457 YDR366CYDR366C 399 nt1.32□□□□□ -2.2
BRE1Q07457 STB6YKL072W 2301 nt1.31□□□□□ -2.2
BRE1Q07457 YLL019W-AYLL019W-A 93 nt1.31□□□□□ -2.2
BRE1Q07457 ABF2YMR072W 552 nt1.31□□□□□ -2.2
BRE1Q07457 SPT7YBR081C 3999 nt1.31□□□□□ -2.2
BRE1Q07457 YDR354C-AYDR354C-A 144 nt1.29□□□□□ -2.2
BRE1Q07457 YGL041CYGL041C 204 nt1.29□□□□□ -2.2
BRE1Q07457 NUP157YER105C 4176 nt1.29□□□□□ -2.2
BRE1Q07457 snR74snR74 88 nt1.28□□□□□ -2.2
BRE1Q07457 CMC4YMR194C-B 222 nt1.28□□□□□ -2.2
BRE1Q07457 YNL211CYNL211C 261 nt1.28□□□□□ -2.2
BRE1Q07457 YPL044CYPL044C 549 nt1.27□□□□□ -2.21
BRE1Q07457 tF(GAA)QtF(GAA)Q 75 nt1.26□□□□□ -2.21
BRE1Q07457 YBR182C-AYBR182C-A 195 nt1.26□□□□□ -2.21
BRE1Q07457 NOP9YJL010C 2001 nt1.26□□□□□ -2.21
BRE1Q07457 YKU70YMR284W 1809 nt1.24□□□□□ -2.21
BRE1Q07457 CDC39YCR093W 6327 nt1.23□□□□□ -2.21
BRE1Q07457 ISD11YER048W-A 285 nt1.23□□□□□ -2.21
BRE1Q07457 YIR030W-AYIR030W-A 384 nt1.23□□□□□ -2.21
BRE1Q07457 YAL067W-AYAL067W-A 228 nt1.23□□□□□ -2.21
BRE1Q07457 YDL196WYDL196W 330 nt1.22□□□□□ -2.21
BRE1Q07457 RPL26BYGR034W 384 nt1.22□□□□□ -2.21
BRE1Q07457 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
BRE1Q07457 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
BRE1Q07457 KAP120YPL125W 3099 nt1.21□□□□□ -2.22
BRE1Q07457 snR80snR80 171 nt1.21□□□□□ -2.22
BRE1Q07457 YMR158W-BYMR158W-B 321 nt1.21□□□□□ -2.22
BRE1Q07457 DOP1YDR141C 5097 nt1.2□□□□□ -2.22
BRE1Q07457 YCR018C-AYCR018C-A 255 nt1.2□□□□□ -2.22
BRE1Q07457 YJL026C-AYJL026C-A 222 nt1.2□□□□□ -2.22
BRE1Q07457 NPR2YEL062W 1848 nt1.17□□□□□ -2.22
BRE1Q07457 UTP20YBL004W 7482 nt1.17□□□□□ -2.22
BRE1Q07457 ULI1YFR026C 510 nt1.17□□□□□ -2.22
BRE1Q07457 BEM2YER155C 6504 nt1.16□□□□□ -2.22
BRE1Q07457 SCC2YDR180W 4482 nt1.15□□□□□ -2.22
BRE1Q07457 YPR117WYPR117W 7470 nt1.15□□□□□ -2.23
BRE1Q07457 EMT1tM(CAU)D 73 nt1.14□□□□□ -2.23
BRE1Q07457 EMT5tM(CAU)J1 73 nt1.14□□□□□ -2.23
BRE1Q07457 EMT3tM(CAU)J2 73 nt1.14□□□□□ -2.23
BRE1Q07457 EMT4tM(CAU)M 73 nt1.14□□□□□ -2.23
BRE1Q07457 EMT2tM(CAU)O2 73 nt1.14□□□□□ -2.23
BRE1Q07457 YKL100W-AYKL100W-A 90 nt1.14□□□□□ -2.23
BRE1Q07457 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
BRE1Q07457 COY1YKL179C 2040 nt1.12□□□□□ -2.23
BRE1Q07457 BLI1YKL061W 342 nt1.12□□□□□ -2.23
BRE1Q07457 SPG3YDR504C 384 nt1.11□□□□□ -2.23
BRE1Q07457 YFR012W-AYFR012W-A 87 nt1.11□□□□□ -2.23
BRE1Q07457 YGL123C-AYGL123C-A 231 nt1.11□□□□□ -2.23
BRE1Q07457 PAM16YJL104W 450 nt1.11□□□□□ -2.23
BRE1Q07457 RPS30BYOR182C 192 nt1.11□□□□□ -2.23
BRE1Q07457 YLR282CYLR282C 342 nt1.1□□□□□ -2.23
BRE1Q07457 YOR302WYOR302W 78 nt1.1□□□□□ -2.23
BRE1Q07457 YOR345CYOR345C 351 nt1.1□□□□□ -2.23
BRE1Q07457 snR190snR190 190 nt1.1□□□□□ -2.23
BRE1Q07457 SEC8YPR055W 3198 nt1.09□□□□□ -2.23
BRE1Q07457 YDL185C-AYDL185C-A 228 nt1.09□□□□□ -2.23
BRE1Q07457 BFR2YDR299W 1605 nt1.08□□□□□ -2.24
BRE1Q07457 PMP1YCR024C-A 123 nt1.07□□□□□ -2.24
BRE1Q07457 YBR131C-AYBR131C-A 90 nt1.07□□□□□ -2.24
BRE1Q07457 YML002WYML002W 2214 nt1.07□□□□□ -2.24
BRE1Q07457 YEL014CYEL014C 306 nt1.06□□□□□ -2.24
BRE1Q07457 COX5BYIL111W 456 nt1.06□□□□□ -2.24
BRE1Q07457 COX12YLR038C 252 nt1.06□□□□□ -2.24
BRE1Q07457 YMR046W-AYMR046W-A 129 nt1.06□□□□□ -2.24
BRE1Q07457 PAU24YBR301W 363 nt1.06□□□□□ -2.24
BRE1Q07457 PRP16YKR086W 3216 nt1.06□□□□□ -2.24
BRE1Q07457 YCR038W-AYCR038W-A 126 nt1.05□□□□□ -2.24
BRE1Q07457 YDL073WYDL073W 2955 nt1.05□□□□□ -2.24
BRE1Q07457 YOR161W-AYOR161W-A 81 nt1.04□□□□□ -2.24
BRE1Q07457 MYO1YHR023W 5787 nt1.04□□□□□ -2.24
BRE1Q07457 tM(CAU)Q1tM(CAU)Q1 76 nt1.03□□□□□ -2.24
BRE1Q07457 YLR399W-AYLR399W-A 105 nt1.03□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms