Protein–RNA interactions for Protein: Q06680

YCG1, Condensin complex subunit 3, yeastyeast

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCG1Q06680 SPC110YDR356W 2835 nt1.64□□□□□ -2.15
YCG1Q06680 FIG4YNL325C 2640 nt1.64□□□□□ -2.15
YCG1Q06680 YOR345CYOR345C 351 nt1.64□□□□□ -2.15
YCG1Q06680 tQ(UUG)E2tQ(UUG)E2 72 nt1.63□□□□□ -2.15
YCG1Q06680 YLR342W-AYLR342W-A 174 nt1.63□□□□□ -2.15
YCG1Q06680 CDC31YOR257W 486 nt1.63□□□□□ -2.15
YCG1Q06680 snR46snR46 197 nt1.63□□□□□ -2.15
YCG1Q06680 MMS4YBR098W 2076 nt1.63□□□□□ -2.15
YCG1Q06680 PAN2YGL094C 3348 nt1.63□□□□□ -2.15
YCG1Q06680 POL5YEL055C 3069 nt1.63□□□□□ -2.15
YCG1Q06680 YLL054CYLL054C 2532 nt1.62□□□□□ -2.15
YCG1Q06680 PRP39YML046W 1890 nt1.62□□□□□ -2.15
YCG1Q06680 YDR354C-AYDR354C-A 144 nt1.61□□□□□ -2.15
YCG1Q06680 SSK2YNR031C 4740 nt1.61□□□□□ -2.15
YCG1Q06680 snR14snR14 160 nt1.6□□□□□ -2.15
YCG1Q06680 CAT8YMR280C 4302 nt1.6□□□□□ -2.15
YCG1Q06680 RPL33BYOR234C 324 nt1.59□□□□□ -2.15
YCG1Q06680 snR52snR52 92 nt1.59□□□□□ -2.15
YCG1Q06680 MDS3YGL197W 4464 nt1.58□□□□□ -2.16
YCG1Q06680 TRS65YGR166W 1683 nt1.58□□□□□ -2.16
YCG1Q06680 PET127YOR017W 2403 nt1.57□□□□□ -2.16
YCG1Q06680 YNL338WYNL338W 159 nt1.57□□□□□ -2.16
YCG1Q06680 MSN5YDR335W 3675 nt1.57□□□□□ -2.16
YCG1Q06680 EST2YLR318W 2655 nt1.57□□□□□ -2.16
YCG1Q06680 HAL9YOL089C 3093 nt1.57□□□□□ -2.16
YCG1Q06680 SXM1YDR395W 2835 nt1.57□□□□□ -2.16
YCG1Q06680 YJL026C-AYJL026C-A 222 nt1.56□□□□□ -2.16
YCG1Q06680 YAR009CYAR009C 3591 nt1.55□□□□□ -2.16
YCG1Q06680 MSH3YCR092C 3057 nt1.55□□□□□ -2.16
YCG1Q06680 APL1YJR005W 2103 nt1.55□□□□□ -2.16
YCG1Q06680 YOR161W-BYOR161W-B 261 nt1.55□□□□□ -2.16
YCG1Q06680 PAA1YDR071C 576 nt1.53□□□□□ -2.16
YCG1Q06680 COY1YKL179C 2040 nt1.53□□□□□ -2.16
YCG1Q06680 FYV8YGR196C 2454 nt1.51□□□□□ -2.17
YCG1Q06680 SET3YKR029C 2256 nt1.51□□□□□ -2.17
YCG1Q06680 YEL073CYEL073C 324 nt1.51□□□□□ -2.17
YCG1Q06680 RPS30BYOR182C 192 nt1.51□□□□□ -2.17
YCG1Q06680 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
YCG1Q06680 STO1YMR125W 2586 nt1.51□□□□□ -2.17
YCG1Q06680 YGR130CYGR130C 2451 nt1.5□□□□□ -2.17
YCG1Q06680 SWI4YER111C 3282 nt1.5□□□□□ -2.17
YCG1Q06680 TTI1YKL033W 3117 nt1.5□□□□□ -2.17
YCG1Q06680 PMP1YCR024C-A 123 nt1.5□□□□□ -2.17
YCG1Q06680 YIL134C-AYIL134C-A 204 nt1.5□□□□□ -2.17
YCG1Q06680 YAL067W-AYAL067W-A 228 nt1.5□□□□□ -2.17
YCG1Q06680 COX12YLR038C 252 nt1.5□□□□□ -2.17
YCG1Q06680 YNL211CYNL211C 261 nt1.5□□□□□ -2.17
YCG1Q06680 PIK1YNL267W 3201 nt1.49□□□□□ -2.17
YCG1Q06680 SMC1YFL008W 3678 nt1.48□□□□□ -2.17
YCG1Q06680 CLU1YMR012W 3834 nt1.48□□□□□ -2.17
YCG1Q06680 YBR221W-AYBR221W-A 105 nt1.48□□□□□ -2.17
YCG1Q06680 YOR381W-AYOR381W-A 168 nt1.47□□□□□ -2.17
YCG1Q06680 RSM22YKL155C 1887 nt1.47□□□□□ -2.17
YCG1Q06680 APL3YBL037W 3078 nt1.47□□□□□ -2.17
YCG1Q06680 AZF1YOR113W 2745 nt1.46□□□□□ -2.17
YCG1Q06680 YCR038W-AYCR038W-A 126 nt1.46□□□□□ -2.18
YCG1Q06680 STF2YGR008C 255 nt1.46□□□□□ -2.18
YCG1Q06680 HUG1YML058W-A 207 nt1.46□□□□□ -2.18
YCG1Q06680 NUP188YML103C 4968 nt1.45□□□□□ -2.18
YCG1Q06680 CDC25YLR310C 4770 nt1.45□□□□□ -2.18
YCG1Q06680 NUP145YGL092W 3954 nt1.45□□□□□ -2.18
YCG1Q06680 YNL284C-BYNL284C-B 5268 nt1.45□□□□□ -2.18
YCG1Q06680 WAR1YML076C 2835 nt1.44□□□□□ -2.18
YCG1Q06680 EAF1YDR359C 2949 nt1.44□□□□□ -2.18
YCG1Q06680 CMC4YMR194C-B 222 nt1.43□□□□□ -2.18
YCG1Q06680 YPL044CYPL044C 549 nt1.43□□□□□ -2.18
YCG1Q06680 YBR200W-AYBR200W-A 165 nt1.43□□□□□ -2.18
YCG1Q06680 YIL002W-AYIL002W-A 210 nt1.42□□□□□ -2.18
YCG1Q06680 LAA1YJL207C 6045 nt1.41□□□□□ -2.18
YCG1Q06680 NOP9YJL010C 2001 nt1.41□□□□□ -2.18
YCG1Q06680 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
YCG1Q06680 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
YCG1Q06680 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
YCG1Q06680 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
YCG1Q06680 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
YCG1Q06680 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
YCG1Q06680 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
YCG1Q06680 ROM2YLR371W 4071 nt1.41□□□□□ -2.18
YCG1Q06680 YGL123C-AYGL123C-A 231 nt1.4□□□□□ -2.19
YCG1Q06680 CDC39YCR093W 6327 nt1.4□□□□□ -2.19
YCG1Q06680 SEC21YNL287W 2808 nt1.39□□□□□ -2.19
YCG1Q06680 YLL020CYLL020C 306 nt1.39□□□□□ -2.19
YCG1Q06680 YDL007C-AYDL007C-A 258 nt1.38□□□□□ -2.19
YCG1Q06680 YKL100W-AYKL100W-A 90 nt1.38□□□□□ -2.19
YCG1Q06680 SEC3YER008C 4011 nt1.37□□□□□ -2.19
YCG1Q06680 YER053C-AYER053C-A 114 nt1.37□□□□□ -2.19
YCG1Q06680 STB6YKL072W 2301 nt1.37□□□□□ -2.19
YCG1Q06680 IML1YJR138W 4755 nt1.36□□□□□ -2.19
YCG1Q06680 Q0092Q0092 141 nt1.36□□□□□ -2.19
YCG1Q06680 COX5BYIL111W 456 nt1.36□□□□□ -2.19
YCG1Q06680 GEA2YEL022W 4380 nt1.35□□□□□ -2.19
YCG1Q06680 YOR161W-AYOR161W-A 81 nt1.35□□□□□ -2.19
YCG1Q06680 NUP157YER105C 4176 nt1.34□□□□□ -2.19
YCG1Q06680 PRP42YDR235W 1635 nt1.34□□□□□ -2.19
YCG1Q06680 tV(UAC)BtV(UAC)B 74 nt1.34□□□□□ -2.19
YCG1Q06680 tV(UAC)DtV(UAC)D 74 nt1.34□□□□□ -2.19
YCG1Q06680 YLR282CYLR282C 342 nt1.34□□□□□ -2.19
YCG1Q06680 PRP5YBR237W 2550 nt1.33□□□□□ -2.2
YCG1Q06680 RPL26BYGR034W 384 nt1.33□□□□□ -2.2
YCG1Q06680 YIL020C-AYIL020C-A 339 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 33.9 ms