Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 SMC4YLR086W 4257 nt1.57□□□□□ -2.16
HRD3Q05787 UFD2YDL190C 2886 nt1.57□□□□□ -2.16
HRD3Q05787 YDL206WYDL206W 2289 nt1.56□□□□□ -2.16
HRD3Q05787 MDS3YGL197W 4464 nt1.56□□□□□ -2.16
HRD3Q05787 YNL170WYNL170W 396 nt1.56□□□□□ -2.16
HRD3Q05787 PKH3YDR466W 2697 nt1.55□□□□□ -2.16
HRD3Q05787 SLX4YLR135W 2247 nt1.55□□□□□ -2.16
HRD3Q05787 NUT1YGL151W 3399 nt1.55□□□□□ -2.16
HRD3Q05787 SKI3YPR189W 4299 nt1.54□□□□□ -2.16
HRD3Q05787 MEC1YBR136W 7107 nt1.54□□□□□ -2.16
HRD3Q05787 YLL054CYLL054C 2532 nt1.54□□□□□ -2.16
HRD3Q05787 YOR161W-BYOR161W-B 261 nt1.54□□□□□ -2.16
HRD3Q05787 RPS30BYOR182C 192 nt1.54□□□□□ -2.16
HRD3Q05787 CHS1YNL192W 3396 nt1.54□□□□□ -2.16
HRD3Q05787 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
HRD3Q05787 MON2YNL297C 4911 nt1.54□□□□□ -2.16
HRD3Q05787 CCH1YGR217W 6120 nt1.53□□□□□ -2.16
HRD3Q05787 YJL026C-AYJL026C-A 222 nt1.53□□□□□ -2.16
HRD3Q05787 MMS4YBR098W 2076 nt1.52□□□□□ -2.17
HRD3Q05787 PAA1YDR071C 576 nt1.52□□□□□ -2.17
HRD3Q05787 HAL9YOL089C 3093 nt1.52□□□□□ -2.17
HRD3Q05787 SMC1YFL008W 3678 nt1.52□□□□□ -2.17
HRD3Q05787 YIL134C-AYIL134C-A 204 nt1.51□□□□□ -2.17
HRD3Q05787 YJL022WYJL022W 309 nt1.51□□□□□ -2.17
HRD3Q05787 APL1YJR005W 2103 nt1.51□□□□□ -2.17
HRD3Q05787 YCR038W-AYCR038W-A 126 nt1.5□□□□□ -2.17
HRD3Q05787 SDH6YDR379C-A 240 nt1.5□□□□□ -2.17
HRD3Q05787 YGR164WYGR164W 336 nt1.5□□□□□ -2.17
HRD3Q05787 snR14snR14 160 nt1.5□□□□□ -2.17
HRD3Q05787 YNL284C-BYNL284C-B 5268 nt1.49□□□□□ -2.17
HRD3Q05787 YBL053WYBL053W 375 nt1.48□□□□□ -2.17
HRD3Q05787 YOR019WYOR019W 2193 nt1.48□□□□□ -2.17
HRD3Q05787 ALY2YJL084C 3141 nt1.47□□□□□ -2.17
HRD3Q05787 TTI1YKL033W 3117 nt1.47□□□□□ -2.17
HRD3Q05787 MSH3YCR092C 3057 nt1.47□□□□□ -2.17
HRD3Q05787 COX12YLR038C 252 nt1.47□□□□□ -2.17
HRD3Q05787 YPL044CYPL044C 549 nt1.47□□□□□ -2.17
HRD3Q05787 PRP42YDR235W 1635 nt1.47□□□□□ -2.17
HRD3Q05787 YNL211CYNL211C 261 nt1.46□□□□□ -2.18
HRD3Q05787 KCS1YDR017C 3153 nt1.45□□□□□ -2.18
HRD3Q05787 YAR009CYAR009C 3591 nt1.45□□□□□ -2.18
HRD3Q05787 YHL015W-AYHL015W-A 84 nt1.45□□□□□ -2.18
HRD3Q05787 YAL067W-AYAL067W-A 228 nt1.45□□□□□ -2.18
HRD3Q05787 PAN2YGL094C 3348 nt1.45□□□□□ -2.18
HRD3Q05787 YBR221W-AYBR221W-A 105 nt1.43□□□□□ -2.18
HRD3Q05787 RSM22YKL155C 1887 nt1.42□□□□□ -2.18
HRD3Q05787 YIL002W-AYIL002W-A 210 nt1.42□□□□□ -2.18
HRD3Q05787 STO1YMR125W 2586 nt1.42□□□□□ -2.18
HRD3Q05787 IRA1YBR140C 9279 nt1.42□□□□□ -2.18
HRD3Q05787 BST1YFL025C 3090 nt1.41□□□□□ -2.18
HRD3Q05787 SNU13YEL026W 381 nt1.41□□□□□ -2.18
HRD3Q05787 YOR102WYOR102W 351 nt1.4□□□□□ -2.19
HRD3Q05787 PRP5YBR237W 2550 nt1.4□□□□□ -2.19
HRD3Q05787 KAP122YGL016W 3246 nt1.4□□□□□ -2.19
HRD3Q05787 SET3YKR029C 2256 nt1.4□□□□□ -2.19
HRD3Q05787 PIK1YNL267W 3201 nt1.39□□□□□ -2.19
HRD3Q05787 SXM1YDR395W 2835 nt1.39□□□□□ -2.19
HRD3Q05787 POL5YEL055C 3069 nt1.38□□□□□ -2.19
HRD3Q05787 tH(GUG)E1tH(GUG)E1 72 nt1.38□□□□□ -2.19
HRD3Q05787 tH(GUG)E2tH(GUG)E2 72 nt1.38□□□□□ -2.19
HRD3Q05787 tH(GUG)G1tH(GUG)G1 72 nt1.38□□□□□ -2.19
HRD3Q05787 tH(GUG)G2tH(GUG)G2 72 nt1.38□□□□□ -2.19
HRD3Q05787 tH(GUG)HtH(GUG)H 72 nt1.38□□□□□ -2.19
HRD3Q05787 tH(GUG)KtH(GUG)K 72 nt1.38□□□□□ -2.19
HRD3Q05787 tH(GUG)MtH(GUG)M 72 nt1.38□□□□□ -2.19
HRD3Q05787 YER053C-AYER053C-A 114 nt1.38□□□□□ -2.19
HRD3Q05787 YGL123C-AYGL123C-A 231 nt1.38□□□□□ -2.19
HRD3Q05787 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
HRD3Q05787 EAF1YDR359C 2949 nt1.38□□□□□ -2.19
HRD3Q05787 WAR1YML076C 2835 nt1.38□□□□□ -2.19
HRD3Q05787 GEA2YEL022W 4380 nt1.38□□□□□ -2.19
HRD3Q05787 APL3YBL037W 3078 nt1.37□□□□□ -2.19
HRD3Q05787 LAA1YJL207C 6045 nt1.37□□□□□ -2.19
HRD3Q05787 CDC25YLR310C 4770 nt1.37□□□□□ -2.19
HRD3Q05787 YGR130CYGR130C 2451 nt1.37□□□□□ -2.19
HRD3Q05787 UTP8YGR128C 2142 nt1.36□□□□□ -2.19
HRD3Q05787 AZF1YOR113W 2745 nt1.36□□□□□ -2.19
HRD3Q05787 YIL020C-AYIL020C-A 339 nt1.36□□□□□ -2.19
HRD3Q05787 YCS4YLR272C 3531 nt1.36□□□□□ -2.19
HRD3Q05787 YOR161W-AYOR161W-A 81 nt1.36□□□□□ -2.19
HRD3Q05787 SWI4YER111C 3282 nt1.35□□□□□ -2.19
HRD3Q05787 CMC4YMR194C-B 222 nt1.35□□□□□ -2.19
HRD3Q05787 PET127YOR017W 2403 nt1.35□□□□□ -2.19
HRD3Q05787 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
HRD3Q05787 YKL100W-AYKL100W-A 90 nt1.33□□□□□ -2.2
HRD3Q05787 YOR314W-AYOR314W-A 111 nt1.33□□□□□ -2.2
HRD3Q05787 YBR200W-AYBR200W-A 165 nt1.33□□□□□ -2.2
HRD3Q05787 NUP145YGL092W 3954 nt1.33□□□□□ -2.2
HRD3Q05787 NUP188YML103C 4968 nt1.32□□□□□ -2.2
HRD3Q05787 NOP9YJL010C 2001 nt1.32□□□□□ -2.2
HRD3Q05787 STF2YGR008C 255 nt1.32□□□□□ -2.2
HRD3Q05787 Q0143Q0143 153 nt1.32□□□□□ -2.2
HRD3Q05787 NUP157YER105C 4176 nt1.32□□□□□ -2.2
HRD3Q05787 FYV8YGR196C 2454 nt1.32□□□□□ -2.2
HRD3Q05787 EST2YLR318W 2655 nt1.32□□□□□ -2.2
HRD3Q05787 COX5BYIL111W 456 nt1.31□□□□□ -2.2
HRD3Q05787 YLR282CYLR282C 342 nt1.31□□□□□ -2.2
HRD3Q05787 SPC110YDR356W 2835 nt1.31□□□□□ -2.2
HRD3Q05787 MYO1YHR023W 5787 nt1.3□□□□□ -2.2
HRD3Q05787 BFR2YDR299W 1605 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 47.5 ms