Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 tF(GAA)GtF(GAA)G 73 nt0.02□□□□□ -2.41
SHH3Q04487 tF(GAA)H1tF(GAA)H1 73 nt0.02□□□□□ -2.41
SHH3Q04487 tF(GAA)H2tF(GAA)H2 73 nt0.02□□□□□ -2.41
SHH3Q04487 tF(GAA)MtF(GAA)M 73 nt0.02□□□□□ -2.41
SHH3Q04487 tF(GAA)P1tF(GAA)P1 73 nt0.02□□□□□ -2.41
SHH3Q04487 tF(GAA)P2tF(GAA)P2 73 nt0.02□□□□□ -2.41
SHH3Q04487 YLR456WYLR456W 615 nt0.02□□□□□ -2.41
SHH3Q04487 LEE1YPL054W 906 nt0.02□□□□□ -2.41
SHH3Q04487 COX12YLR038C 252 nt0.01□□□□□ -2.41
SHH3Q04487 SGF11YPL047W 300 nt0.01□□□□□ -2.41
SHH3Q04487 YPL225WYPL225W 441 nt0.01□□□□□ -2.41
SHH3Q04487 RPS26AYGL189C 360 nt0□□□□□ -2.41
SHH3Q04487 TOM22YNL131W 459 nt0□□□□□ -2.41
SHH3Q04487 YER006C-AYER006C-A 318 nt-0.01□□□□□ -2.41
SHH3Q04487 tN(GUU)QtN(GUU)Q 71 nt-0.01□□□□□ -2.41
SHH3Q04487 YLR334CYLR334C 381 nt-0.01□□□□□ -2.41
SHH3Q04487 YNL146WYNL146W 303 nt-0.01□□□□□ -2.41
SHH3Q04487 snR190snR190 190 nt-0.01□□□□□ -2.41
SHH3Q04487 snR41snR41 95 nt-0.01□□□□□ -2.41
SHH3Q04487 MLP2YIL149C 5040 nt-0.02□□□□□ -2.41
SHH3Q04487 YPL068CYPL068C 882 nt-0.02□□□□□ -2.41
SHH3Q04487 HMRA2YCR096C 360 nt-0.03□□□□□ -2.41
SHH3Q04487 YJL120WYJL120W 324 nt-0.03□□□□□ -2.41
SHH3Q04487 RPS25BYLR333C 327 nt-0.03□□□□□ -2.41
SHH3Q04487 NNF2YGR089W 2811 nt-0.03□□□□□ -2.41
SHH3Q04487 PCC1YKR095W-A 267 nt-0.05□□□□□ -2.42
SHH3Q04487 YCR018C-AYCR018C-A 255 nt-0.06□□□□□ -2.42
SHH3Q04487 STE5YDR103W 2754 nt-0.06□□□□□ -2.42
SHH3Q04487 NIP1YMR309C 2439 nt-0.07□□□□□ -2.42
SHH3Q04487 ULI1YFR026C 510 nt-0.08□□□□□ -2.42
SHH3Q04487 YMR307C-AYMR307C-A 195 nt-0.08□□□□□ -2.42
SHH3Q04487 YOR186C-AYOR186C-A 210 nt-0.08□□□□□ -2.42
SHH3Q04487 COY1YKL179C 2040 nt-0.08□□□□□ -2.42
SHH3Q04487 YNL303WYNL303W 348 nt-0.09□□□□□ -2.42
SHH3Q04487 YOL014WYOL014W 375 nt-0.09□□□□□ -2.42
SHH3Q04487 YOL013W-BYOL013W-B 291 nt-0.1□□□□□ -2.43
SHH3Q04487 YPR092WYPR092W 306 nt-0.11□□□□□ -2.43
SHH3Q04487 SOV1YMR066W 2697 nt-0.11□□□□□ -2.43
SHH3Q04487 YCR022CYCR022C 345 nt-0.12□□□□□ -2.43
SHH3Q04487 SSS1YDR086C 243 nt-0.12□□□□□ -2.43
SHH3Q04487 COG8YML071C 1824 nt-0.13□□□□□ -2.43
SHH3Q04487 YKU70YMR284W 1809 nt-0.13□□□□□ -2.43
SHH3Q04487 RPL35AYDL191W 363 nt-0.13□□□□□ -2.43
SHH3Q04487 YLR434CYLR434C 384 nt-0.13□□□□□ -2.43
SHH3Q04487 BUL2YML111W 2763 nt-0.13□□□□□ -2.43
SHH3Q04487 CSN9YDR179C 489 nt-0.14□□□□□ -2.43
SHH3Q04487 YLR232WYLR232W 348 nt-0.14□□□□□ -2.43
SHH3Q04487 YDL158CYDL158C 309 nt-0.15□□□□□ -2.43
SHH3Q04487 YER078W-AYER078W-A 165 nt-0.15□□□□□ -2.43
SHH3Q04487 YHR007C-AYHR007C-A 216 nt-0.15□□□□□ -2.43
SHH3Q04487 YHR138CYHR138C 345 nt-0.15□□□□□ -2.43
SHH3Q04487 YAR029WYAR029W 225 nt-0.15□□□□□ -2.43
SHH3Q04487 YDR354C-AYDR354C-A 144 nt-0.16□□□□□ -2.44
SHH3Q04487 YHR131W-AYHR131W-A 246 nt-0.16□□□□□ -2.44
SHH3Q04487 YLR282CYLR282C 342 nt-0.16□□□□□ -2.44
SHH3Q04487 ATP19YOL077W-A 207 nt-0.16□□□□□ -2.44
SHH3Q04487 YEL050W-AYEL050W-A 192 nt-0.17□□□□□ -2.44
SHH3Q04487 VPS20YMR077C 666 nt-0.17□□□□□ -2.44
SHH3Q04487 YLL006W-AYLL006W-A 177 nt-0.18□□□□□ -2.44
SHH3Q04487 snR45snR45 172 nt-0.18□□□□□ -2.44
SHH3Q04487 YEL073CYEL073C 324 nt-0.19□□□□□ -2.44
SHH3Q04487 QCR9YGR183C 201 nt-0.19□□□□□ -2.44
SHH3Q04487 YJL026C-AYJL026C-A 222 nt-0.19□□□□□ -2.44
SHH3Q04487 YKL136WYKL136W 399 nt-0.19□□□□□ -2.44
SHH3Q04487 YOR032W-AYOR032W-A 201 nt-0.2□□□□□ -2.44
SHH3Q04487 THO2YNL139C 4794 nt-0.2□□□□□ -2.44
SHH3Q04487 YOR161W-AYOR161W-A 81 nt-0.23□□□□□ -2.45
SHH3Q04487 PRM3YPL192C 402 nt-0.24□□□□□ -2.45
SHH3Q04487 snR8snR8 190 nt-0.26□□□□□ -2.45
SHH3Q04487 YLR041WYLR041W 321 nt-0.27□□□□□ -2.45
SHH3Q04487 SNU13YEL026W 381 nt-0.28□□□□□ -2.45
SHH3Q04487 YLR406C-AYLR406C-A 150 nt-0.28□□□□□ -2.45
SHH3Q04487 YIL115W-AYIL115W-A 372 nt-0.29□□□□□ -2.46
SHH3Q04487 HTB2YBL002W 396 nt-0.29□□□□□ -2.46
SHH3Q04487 snR128snR128 126 nt-0.29□□□□□ -2.46
SHH3Q04487 YPL205CYPL205C 345 nt-0.29□□□□□ -2.46
SHH3Q04487 YEL020C-BYEL020C-B 198 nt-0.3□□□□□ -2.46
SHH3Q04487 YGL123C-AYGL123C-A 231 nt-0.3□□□□□ -2.46
SHH3Q04487 snR189snR189 189 nt-0.3□□□□□ -2.46
SHH3Q04487 RPS27BYHR021C 249 nt-0.31□□□□□ -2.46
SHH3Q04487 BLI1YKL061W 342 nt-0.31□□□□□ -2.46
SHH3Q04487 YAR053WYAR053W 297 nt-0.31□□□□□ -2.46
SHH3Q04487 YDR210WYDR210W 228 nt-0.32□□□□□ -2.46
SHH3Q04487 YBR072C-AYBR072C-A 162 nt-0.33□□□□□ -2.46
SHH3Q04487 YER137W-AYER137W-A 306 nt-0.34□□□□□ -2.46
SHH3Q04487 YAL016C-BYAL016C-B 186 nt-0.34□□□□□ -2.46
SHH3Q04487 YDR366CYDR366C 399 nt-0.35□□□□□ -2.47
SHH3Q04487 YFL063WYFL063W 456 nt-0.35□□□□□ -2.47
SHH3Q04487 YJL007CYJL007C 315 nt-0.35□□□□□ -2.47
SHH3Q04487 tW(UCA)QtW(UCA)Q 74 nt-0.36□□□□□ -2.47
SHH3Q04487 TFB5YDR079C-A 219 nt-0.37□□□□□ -2.47
SHH3Q04487 YER079WYER079W 633 nt-0.37□□□□□ -2.47
SHH3Q04487 YMR158W-BYMR158W-B 321 nt-0.37□□□□□ -2.47
SHH3Q04487 YBR099CYBR099C 384 nt-0.37□□□□□ -2.47
SHH3Q04487 YDR048CYDR048C 315 nt-0.38□□□□□ -2.47
SHH3Q04487 YKL063CYKL063C 504 nt-0.38□□□□□ -2.47
SHH3Q04487 YKL100W-AYKL100W-A 90 nt-0.38□□□□□ -2.47
SHH3Q04487 YLR202CYLR202C 327 nt-0.38□□□□□ -2.47
SHH3Q04487 CSE2YNR010W 450 nt-0.38□□□□□ -2.47
SHH3Q04487 YBR285WYBR285W 435 nt-0.38□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms